RNA–Protein interactions for RNA: ENST00000491747.6

BRCA1-219, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 2,379 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-219ENST00000491747 NMRK2Q9NPI5 230 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 POLLQ9UGP5 575 aa11.74□□□□□ -0.53
BRCA1-219ENST00000491747 NSFL1CQ9UNZ2 370 aaKnown RBP11.74□□□□□ -0.53
BRCA1-219ENST00000491747 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
BRCA1-219ENST00000491747 ZC3H4Q9UPT8 1303 aaKnown RBP11.73□□□□□ -0.53
BRCA1-219ENST00000491747 AOC3Q16853 763 aa11.73□□□□□ -0.53
BRCA1-219ENST00000491747 GPR101Q96P66 508 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-219ENST00000491747 TMX4Q9H1E5 349 aaPredicted RBP11.73□□□□□ -0.53
BRCA1-219ENST00000491747 ZNF541Q9H0D2 1346 aa11.73□□□□□ -0.53
BRCA1-219ENST00000491747 GLTPD2A6NH11 291 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 CDC5LQ99459 802 aaKnown RBP11.72□□□□□ -0.53
BRCA1-219ENST00000491747 DAXXQ9UER7 740 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-219ENST00000491747 WDR90Q96KV7 1748 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 FZD9O00144 591 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 KIF3CO14782 793 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 CCT4P50991 539 aaKnown RBP11.72□□□□□ -0.53
BRCA1-219ENST00000491747 ATF7IPQ6VMQ6 1270 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 ANKRD44Q8N8A2 993 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 CLUAP1Q96AJ1 413 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 BICC1Q9H694 974 aaKnown RBP11.72□□□□□ -0.53
BRCA1-219ENST00000491747 BSDC1Q9NW68 430 aaPredicted RBP11.72□□□□□ -0.53
BRCA1-219ENST00000491747 MINPP1Q9UNW1 487 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 CHMP3Q9Y3E7 222 aa11.72□□□□□ -0.53
BRCA1-219ENST00000491747 POTECB2RU33 542 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 PPIP5K2O43314 1243 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 DDNO94850 711 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-219ENST00000491747 INTS3Q68E01 1043 aaKnown RBP11.71□□□□□ -0.53
BRCA1-219ENST00000491747 LARGE2Q8N3Y3 721 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 TBC1D16Q8TBP0 767 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 ZNF594Q96JF6 807 aaPredicted RBP11.71□□□□□ -0.53
BRCA1-219ENST00000491747 RRAGCQ9HB90 399 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 PODXL2Q9NZ53 605 aa11.71□□□□□ -0.53
BRCA1-219ENST00000491747 SUPT20HQ8NEM7 779 aa11.71□□□□□ -0.54
BRCA1-219ENST00000491747 ANKRD18BA2A2Z9 1011 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 IPO8O15397 1037 aaKnown RBP11.7□□□□□ -0.54
BRCA1-219ENST00000491747 KIAA2012Q0VF49 1180 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 RABL6Q3YEC7 729 aaPredicted RBP11.7□□□□□ -0.54
BRCA1-219ENST00000491747 C20orf194Q5TEA3 1177 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 C6orf229H3BNL8 230 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 RIMBP2O15034 1052 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 IGHMBP2P38935 993 aaKnown RBP11.7□□□□□ -0.54
BRCA1-219ENST00000491747 IFIT5Q13325 482 aaKnown RBP11.7□□□□□ -0.54
BRCA1-219ENST00000491747 ZKSCAN2Q63HK3 967 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 MEIS3Q99687 375 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 VPS33BQ9H267 617 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 ANKIB1Q9P2G1 1089 aa11.7□□□□□ -0.54
BRCA1-219ENST00000491747 DPY19L2Q6NUT2 758 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 JDP2Q8WYK2 163 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 SCN9AQ15858 1988 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 YDJCA8MPS7 323 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 UFL1O94874 794 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 RLBP1P12271 317 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 WASHC4Q2M389 1173 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 TMEM57Q8N5G2 664 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 XDHP47989 1333 aa11.69□□□□□ -0.54
BRCA1-219ENST00000491747 CCDC57Q2TAC2 916 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 SKAP1Q86WV1 359 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 NIM1KQ8IY84 436 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 MPHOSPH8Q99549 860 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 PUS3Q9BZE2 481 aaKnown RBP11.68□□□□□ -0.54
BRCA1-219ENST00000491747 GGA1Q9UJY5 639 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 SCN4AP35499 1836 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 SNAP23O00161 211 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 UBTFL1P0CB47 393 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-219ENST00000491747 CHRNDQ07001 517 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 DOK7Q18PE1 504 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 HELBQ8NG08 1087 aaPredicted RBP11.68□□□□□ -0.54
BRCA1-219ENST00000491747 KLHDC4Q8TBB5 520 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 DBNDD1Q9H9R9 158 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
BRCA1-219ENST00000491747 ZNF646O15015 1829 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-219ENST00000491747 TAF5LO75529 589 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 CXCL9Q07325 125 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 IL27Q8NEV9 243 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 ZNRF3Q9ULT6 936 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 LRRFIP2Q9Y608 721 aaKnown RBP11.67□□□□□ -0.54
BRCA1-219ENST00000491747 PSME4Q14997 1843 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 ATP2B4P23634 1241 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 RFX5P48382 616 aaPredicted RBP11.67□□□□□ -0.54
BRCA1-219ENST00000491747 GSE1Q14687 1217 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 LDHAL6AQ6ZMR3 332 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 TXNRD3Q86VQ6 643 aa11.67□□□□□ -0.54
BRCA1-219ENST00000491747 KLRK1P26718 216 aa11.66□□□□□ -0.54
BRCA1-219ENST00000491747 EIF6P56537 245 aaKnown RBP11.66□□□□□ -0.54
BRCA1-219ENST00000491747 NFKBIBQ15653 356 aa11.66□□□□□ -0.54
BRCA1-219ENST00000491747 GPC2Q8N158 579 aa11.66□□□□□ -0.54
BRCA1-219ENST00000491747 EYA3Q99504 573 aa11.66□□□□□ -0.54
BRCA1-219ENST00000491747 GJA3Q9Y6H8 435 aa11.66□□□□□ -0.54
BRCA1-219ENST00000491747 RAD17O75943 681 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 VEGFAP15692 232 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-219ENST00000491747 LRRC24Q50LG9 513 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 TAF7LQ5H9L4 462 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 DZIP1LQ8IYY4 767 aaKnown RBP11.65□□□□□ -0.54
BRCA1-219ENST00000491747 L3MBTL3Q96JM7 780 aaPredicted RBP11.65□□□□□ -0.54
BRCA1-219ENST00000491747 ZC3H12CQ9C0D7 883 aaKnown RBP11.65□□□□□ -0.54
BRCA1-219ENST00000491747 ECE2O60344 883 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 C8orf34Q49A92 452 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 PANK1Q8TE04 598 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 ANKRD2Q9GZV1 360 aa11.65□□□□□ -0.54
BRCA1-219ENST00000491747 RIPOR2Q9Y4F9 1068 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms