RNA–Protein interactions for RNA: ENST00000491521.1

CDK9-204, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 510 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-204ENST00000491521 YDJCA8MPS7 323 aa17.27■□□□□ 0.36
CDK9-204ENST00000491521 CTSWP56202 376 aa17.27■□□□□ 0.36
CDK9-204ENST00000491521 UBE3BQ7Z3V4 1068 aa17.27■□□□□ 0.36
CDK9-204ENST00000491521 MRPL50Q8N5N7 158 aaKnown RBP17.27■□□□□ 0.36
CDK9-204ENST00000491521 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.27■□□□□ 0.36
CDK9-204ENST00000491521 CREBZFQ9NS37 354 aa17.27■□□□□ 0.36
CDK9-204ENST00000491521 MYH3P11055 1940 aa17.27■□□□□ 0.35
CDK9-204ENST00000491521 PASKQ96RG2 1323 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 UFL1O94874 794 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 ITGBL1O95965 494 aaPredicted RBP17.26■□□□□ 0.35
CDK9-204ENST00000491521 TNIP1Q15025 636 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 ANKRD18AQ8IVF6 992 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 TBC1D16Q8TBP0 767 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 EYA3Q99504 573 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 GPRC5DQ9NZD1 345 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 CACNA1FO60840 1977 aa17.26■□□□□ 0.35
CDK9-204ENST00000491521 CDHR2Q9BYE9 1310 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 G3V3G9 751 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 ECE2O60344 883 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 DCAF8Q5TAQ9 597 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 IFFO2Q5TF58 517 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 JMYQ8N9B5 988 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 DNAAF4Q8WXU2 420 aa17.25■□□□□ 0.35
CDK9-204ENST00000491521 SHTN1A0MZ66 631 aa17.24■□□□□ 0.35
CDK9-204ENST00000491521 TMEM88BA6NKF7 163 aa17.24■□□□□ 0.35
CDK9-204ENST00000491521 FMR1Q06787 632 aaKnown RBP eCLIP17.24■□□□□ 0.35
CDK9-204ENST00000491521 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
CDK9-204ENST00000491521 GREM2Q9H772 168 aa17.24■□□□□ 0.35
CDK9-204ENST00000491521 KCNQ5Q9NR82 932 aa17.24■□□□□ 0.35
CDK9-204ENST00000491521 ADARB2Q9NS39 739 aaKnown RBP17.24■□□□□ 0.35
CDK9-204ENST00000491521 GGA1Q9UJY5 639 aa17.24■□□□□ 0.35
CDK9-204ENST00000491521 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
CDK9-204ENST00000491521 ZBTB12Q9Y330 459 aaPredicted RBP17.24■□□□□ 0.35
CDK9-204ENST00000491521 F6X3S4 739 aa17.23■□□□□ 0.35
CDK9-204ENST00000491521 PSMD14O00487 310 aa17.23■□□□□ 0.35
CDK9-204ENST00000491521 IPO8O15397 1037 aaKnown RBP17.23■□□□□ 0.35
CDK9-204ENST00000491521 PLIN1O60240 522 aa17.23■□□□□ 0.35
CDK9-204ENST00000491521 GCKRQ14397 625 aa17.23■□□□□ 0.35
CDK9-204ENST00000491521 TTLL11Q8NHH1 800 aa17.23■□□□□ 0.35
CDK9-204ENST00000491521 CDC5LQ99459 802 aaKnown RBP17.23■□□□□ 0.35
CDK9-204ENST00000491521 ZC3H12CQ9C0D7 883 aaKnown RBP17.23■□□□□ 0.35
CDK9-204ENST00000491521 H7C1W4 665 aa17.22■□□□□ 0.35
CDK9-204ENST00000491521 TRAF5O00463 557 aa17.22■□□□□ 0.35
CDK9-204ENST00000491521 RRP1P56182 461 aaKnown RBP17.22■□□□□ 0.35
CDK9-204ENST00000491521 CNOT7Q9UIV1 285 aaKnown RBP17.22■□□□□ 0.35
CDK9-204ENST00000491521 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 ZKSCAN2Q63HK3 967 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 MICALL2Q8IY33 904 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 LINS1Q8NG48 757 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 PODXL2Q9NZ53 605 aa17.21■□□□□ 0.35
CDK9-204ENST00000491521 ABT1Q9ULW3 272 aaKnown RBP17.21■□□□□ 0.35
CDK9-204ENST00000491521 XDHP47989 1333 aa17.21■□□□□ 0.34
CDK9-204ENST00000491521 BRPF1P55201 1214 aaPredicted RBP17.2■□□□□ 0.34
CDK9-204ENST00000491521 FAM161AQ3B820 660 aa17.2■□□□□ 0.34
CDK9-204ENST00000491521 CNTNAP1P78357 1384 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 RTL9Q8NET4 1388 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 SCN9AQ15858 1988 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 WTIPA6NIX2 430 aaPredicted RBP17.19■□□□□ 0.34
CDK9-204ENST00000491521 H7C1D1 291 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 HSPA1AP0DMV8 641 aaKnown RBP17.19■□□□□ 0.34
CDK9-204ENST00000491521 HSPA1BP0DMV9 641 aaKnown RBP17.19■□□□□ 0.34
CDK9-204ENST00000491521 RBM26Q5T8P6 1007 aaKnown RBP17.19■□□□□ 0.34
CDK9-204ENST00000491521 SLC4A10Q6U841 1118 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 CHMP3Q9Y3E7 222 aa17.19■□□□□ 0.34
CDK9-204ENST00000491521 NEFLP07196 543 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 ITGA6P23229 1130 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 IGHMBP2P38935 993 aaKnown RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 VEGFBP49765 207 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 HIRAP54198 1017 aaPredicted RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 TBC1D10BQ4KMP7 808 aaPredicted RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 PAXIP1Q6ZW49 1069 aaPredicted RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 SAMD7Q7Z3H4 446 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 GLIS2Q9BZE0 524 aaPredicted RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 API5Q9BZZ5 524 aaKnown RBP17.18■□□□□ 0.34
CDK9-204ENST00000491521 MINPP1Q9UNW1 487 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 TRPM7Q96QT4 1865 aa17.18■□□□□ 0.34
CDK9-204ENST00000491521 MS4A1P11836 297 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 ATP2B4P23634 1241 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 CASP7P55210 303 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 GRM1Q13255 1194 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 BEND3Q5T5X7 828 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 ATF7IPQ6VMQ6 1270 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 ARHGAP45Q92619 1136 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 FBXW7Q969H0 707 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 CLUAP1Q96AJ1 413 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 ZNF408Q9H9D4 720 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
CDK9-204ENST00000491521 PTPRCP08575 1304 aa17.17■□□□□ 0.34
CDK9-204ENST00000491521 IRX6P78412 446 aaPredicted RBP17.16■□□□□ 0.34
CDK9-204ENST00000491521 FTSJ3Q8IY81 847 aaKnown RBP17.16■□□□□ 0.34
CDK9-204ENST00000491521 MPHOSPH8Q99549 860 aa17.16■□□□□ 0.34
CDK9-204ENST00000491521 PLA2G12BQ9BX93 195 aa17.16■□□□□ 0.34
CDK9-204ENST00000491521 CELF2O95319 508 aaKnown RBP17.15■□□□□ 0.34
CDK9-204ENST00000491521 EGFRP00533 1210 aa17.15■□□□□ 0.34
CDK9-204ENST00000491521 DEFB115Q30KQ5 88 aa17.15■□□□□ 0.34
CDK9-204ENST00000491521 DZIP1LQ8IYY4 767 aaKnown RBP17.15■□□□□ 0.34
CDK9-204ENST00000491521 DPF2Q92785 391 aa17.15■□□□□ 0.34
CDK9-204ENST00000491521 TNNQ9UQP3 1299 aa17.15■□□□□ 0.34
CDK9-204ENST00000491521 ANKRD18BA2A2Z9 1011 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms