RNA–Protein interactions for RNA: ENST00000491064.5

CTDSP1-210, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 786 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-210ENST00000491064 CTU1Q7Z7A3 348 aaKnown RBP17.87■□□□□ 0.45
CTDSP1-210ENST00000491064 SULF1Q8IWU6 871 aa17.87■□□□□ 0.45
CTDSP1-210ENST00000491064 EYA3Q99504 573 aa17.87■□□□□ 0.45
CTDSP1-210ENST00000491064 ASTN2O75129 1339 aaPredicted RBP17.87■□□□□ 0.45
CTDSP1-210ENST00000491064 VIL1P09327 827 aaKnown RBP17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 KRT24Q2M2I5 525 aa17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 TBC1D16Q8TBP0 767 aa17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 CDCA5Q96FF9 252 aa17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 ISCA1Q9BUE6 129 aa17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 PSME4Q14997 1843 aa17.86■□□□□ 0.45
CTDSP1-210ENST00000491064 RASAL3Q86YV0 1011 aa17.85■□□□□ 0.45
CTDSP1-210ENST00000491064 PLBD2Q8NHP8 589 aa17.85■□□□□ 0.45
CTDSP1-210ENST00000491064 CHPF2Q9P2E5 772 aa17.85■□□□□ 0.45
CTDSP1-210ENST00000491064 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-210ENST00000491064 PRPF38BQ5VTL8 546 aaKnown RBP17.84■□□□□ 0.45
CTDSP1-210ENST00000491064 REM2Q8IYK8 340 aaPredicted RBP17.84■□□□□ 0.45
CTDSP1-210ENST00000491064 PAPPA2Q9BXP8 1791 aa17.84■□□□□ 0.45
CTDSP1-210ENST00000491064 ZNF609O15014 1411 aa17.83■□□□□ 0.45
CTDSP1-210ENST00000491064 ATP5J2-PTCD1G3V325 749 aa17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 RPS8P62241 208 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 LMOD3Q0VAK6 560 aa17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 RTL5Q5HYW3 569 aaPredicted RBP17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 ANKRD13DQ6ZTN6 518 aa17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 ZC3H12CQ9C0D7 883 aaKnown RBP17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 PODXL2Q9NZ53 605 aa17.83■□□□□ 0.44
CTDSP1-210ENST00000491064 CHL1O00533 1208 aa17.82■□□□□ 0.44
CTDSP1-210ENST00000491064 ZNF280AP59817 542 aaPredicted RBP17.82■□□□□ 0.44
CTDSP1-210ENST00000491064 SCARF1Q14162 830 aa17.82■□□□□ 0.44
CTDSP1-210ENST00000491064 ANGEL2Q5VTE6 544 aaKnown RBP17.82■□□□□ 0.44
CTDSP1-210ENST00000491064 HPS5Q9UPZ3 1129 aa17.82■□□□□ 0.44
CTDSP1-210ENST00000491064 IRS4O14654 1257 aaPredicted RBP17.81■□□□□ 0.44
CTDSP1-210ENST00000491064 FKBP1BP68106 108 aa17.81■□□□□ 0.44
CTDSP1-210ENST00000491064 HDGFL1Q5TGJ6 251 aa17.81■□□□□ 0.44
CTDSP1-210ENST00000491064 AGBL3Q8NEM8 1001 aa17.81■□□□□ 0.44
CTDSP1-210ENST00000491064 UFL1O94874 794 aa17.8■□□□□ 0.44
CTDSP1-210ENST00000491064 TRIM28Q13263 835 aaKnown RBP17.8■□□□□ 0.44
CTDSP1-210ENST00000491064 RSBN1LQ6PCB5 846 aaPredicted RBP17.8■□□□□ 0.44
CTDSP1-210ENST00000491064 G3V3G9 751 aa17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 DCAF8Q5TAQ9 597 aa17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 SEC31BQ9NQW1 1179 aa17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 ANKIB1Q9P2G1 1089 aa17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 DBF4Q9UBU7 674 aaPredicted RBP17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 GGA1Q9UJY5 639 aa17.79■□□□□ 0.44
CTDSP1-210ENST00000491064 PITPNM2Q9BZ72 1349 aa17.78■□□□□ 0.44
CTDSP1-210ENST00000491064 HOXB7P09629 217 aa17.78■□□□□ 0.44
CTDSP1-210ENST00000491064 PKN2Q16513 984 aaKnown RBP17.78■□□□□ 0.44
CTDSP1-210ENST00000491064 GMLQ99445 158 aa17.78■□□□□ 0.44
CTDSP1-210ENST00000491064 MYOZ2Q9NPC6 264 aa17.78■□□□□ 0.44
CTDSP1-210ENST00000491064 MOB2Q70IA6 237 aa17.77■□□□□ 0.44
CTDSP1-210ENST00000491064 ZNF296Q8WUU4 475 aaPredicted RBP17.77■□□□□ 0.44
CTDSP1-210ENST00000491064 HYPKQ9NX55 129 aa17.77■□□□□ 0.44
CTDSP1-210ENST00000491064 HDAC9Q9UKV0 1011 aa17.77■□□□□ 0.44
CTDSP1-210ENST00000491064 LAS1LQ9Y4W2 734 aaKnown RBP17.77■□□□□ 0.44
CTDSP1-210ENST00000491064 TBC1D8O95759 1140 aa17.76■□□□□ 0.43
CTDSP1-210ENST00000491064 USP17L8P0C7I0 530 aa17.76■□□□□ 0.43
CTDSP1-210ENST00000491064 NEUROD2Q15784 382 aa17.76■□□□□ 0.43
CTDSP1-210ENST00000491064 ZBTB38Q8NAP3 1195 aaPredicted RBP17.76■□□□□ 0.43
CTDSP1-210ENST00000491064 SCAF8Q9UPN6 1271 aaKnown RBP17.76■□□□□ 0.43
CTDSP1-210ENST00000491064 UBE2Q2LH0YL09 131 aa17.75■□□□□ 0.43
CTDSP1-210ENST00000491064 TRIM35Q9UPQ4 493 aa17.75■□□□□ 0.43
CTDSP1-210ENST00000491064 MKI67P46013 3256 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-210ENST00000491064 HSP90B1P14625 803 aaKnown RBP17.74■□□□□ 0.43
CTDSP1-210ENST00000491064 ZNF646O15015 1829 aaPredicted RBP17.74■□□□□ 0.43
CTDSP1-210ENST00000491064 XDHP47989 1333 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 USP17L3A6NCW0 530 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 USP17L4A6NCW7 530 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 GPR25O00155 361 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 TM4SF4P48230 202 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 CCDC152Q4G0S7 254 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 NOM1Q5C9Z4 860 aaKnown RBP17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 PRAMEF18Q5VWM3 479 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 USP17L1Q7RTZ2 530 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 RIC3Q7Z5B4 369 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 PODNQ7Z5L7 613 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 CCDC146Q8IYE0 955 aa17.73■□□□□ 0.43
CTDSP1-210ENST00000491064 NBPF9Q3BBW0 867 aa17.72■□□□□ 0.43
CTDSP1-210ENST00000491064 DUSP27Q5VZP5 1158 aa17.72■□□□□ 0.43
CTDSP1-210ENST00000491064 FBXO46Q6PJ61 603 aaPredicted RBP17.72■□□□□ 0.43
CTDSP1-210ENST00000491064 HTTP42858 3142 aa17.72■□□□□ 0.43
CTDSP1-210ENST00000491064 PDE8AO60658 829 aa17.71■□□□□ 0.43
CTDSP1-210ENST00000491064 GOLGA2Q08379 1002 aa17.71■□□□□ 0.43
CTDSP1-210ENST00000491064 CCDC85AQ96PX6 553 aaPredicted RBP17.71■□□□□ 0.43
CTDSP1-210ENST00000491064 CENPFP49454 3210 aa17.71■□□□□ 0.43
CTDSP1-210ENST00000491064 PCCAP05165 728 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 ATP2B4P23634 1241 aa17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 TTLL12Q14166 644 aaPredicted RBP17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 ANKRD18AQ8IVF6 992 aa17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 CCDC191Q8NCU4 936 aa17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 MYD88Q99836 296 aa17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 PHAXQ9H814 394 aaKnown RBP17.7■□□□□ 0.42
CTDSP1-210ENST00000491064 WTIPA6NIX2 430 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 WNT10BO00744 389 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 MKRN3Q13064 507 aaKnown RBP17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 RALBP1Q15311 655 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 JARID2Q92833 1246 aaPredicted RBP17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 RUNDC1Q96C34 613 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 CFHR5Q9BXR6 569 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 SPEF2Q9C093 1822 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 BRCA2P51587 3418 aa17.69■□□□□ 0.42
CTDSP1-210ENST00000491064 MED23Q9ULK4 1368 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 125.5 ms