RNA–Protein interactions for RNA: ENST00000490999.5

SCAMP3-208, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 2

Gene SCAMP3, Length 1,011 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-208ENST00000490999 RASAL3Q86YV0 1011 aa20.07■□□□□ 0.8
SCAMP3-208ENST00000490999 CSRNP1Q96S65 589 aa20.07■□□□□ 0.8
SCAMP3-208ENST00000490999 TBC1D16Q8TBP0 767 aa20.06■□□□□ 0.8
SCAMP3-208ENST00000490999 SCAF8Q9UPN6 1271 aaKnown RBP20.06■□□□□ 0.8
SCAMP3-208ENST00000490999 SCN9AQ15858 1988 aa20.06■□□□□ 0.8
SCAMP3-208ENST00000490999 ANGEL2Q5VTE6 544 aaKnown RBP20.05■□□□□ 0.8
SCAMP3-208ENST00000490999 CTU1Q7Z7A3 348 aaKnown RBP20.05■□□□□ 0.8
SCAMP3-208ENST00000490999 EYA3Q99504 573 aa20.05■□□□□ 0.8
SCAMP3-208ENST00000490999 UFL1O94874 794 aa20.04■□□□□ 0.8
SCAMP3-208ENST00000490999 SF3B3Q15393 1217 aaKnown RBP20.04■□□□□ 0.8
SCAMP3-208ENST00000490999 ISCA1Q9BUE6 129 aa20.04■□□□□ 0.8
SCAMP3-208ENST00000490999 PNNQ9H307 717 aaKnown RBP20.04■□□□□ 0.8
SCAMP3-208ENST00000490999 LAS1LQ9Y4W2 734 aaKnown RBP20.04■□□□□ 0.8
SCAMP3-208ENST00000490999 TMPOP42166 694 aaKnown RBP20.03■□□□□ 0.8
SCAMP3-208ENST00000490999 NEUROD2Q15784 382 aa20.03■□□□□ 0.8
SCAMP3-208ENST00000490999 HDGFL1Q5TGJ6 251 aa20.03■□□□□ 0.8
SCAMP3-208ENST00000490999 MOB2Q70IA6 237 aa20.03■□□□□ 0.8
SCAMP3-208ENST00000490999 PLBD2Q8NHP8 589 aa20.03■□□□□ 0.8
SCAMP3-208ENST00000490999 IRS4O14654 1257 aaPredicted RBP20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 PRPF38BQ5VTL8 546 aaKnown RBP20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 CCDC146Q8IYE0 955 aa20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 SEC31BQ9NQW1 1179 aa20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 HPS5Q9UPZ3 1129 aa20.02■□□□□ 0.8
SCAMP3-208ENST00000490999 PAPPA2Q9BXP8 1791 aa20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 VIL1P09327 827 aaKnown RBP20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 LMOD3Q0VAK6 560 aa20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 SCARF1Q14162 830 aa20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 ANKRD13DQ6ZTN6 518 aa20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 ZC3H12CQ9C0D7 883 aaKnown RBP20.01■□□□□ 0.79
SCAMP3-208ENST00000490999 G3V3G9 751 aa20■□□□□ 0.79
SCAMP3-208ENST00000490999 RPS8P62241 208 aaKnown RBP20■□□□□ 0.79
SCAMP3-208ENST00000490999 DCAF8Q5TAQ9 597 aa20■□□□□ 0.79
SCAMP3-208ENST00000490999 CCDC85AQ96PX6 553 aaPredicted RBP20■□□□□ 0.79
SCAMP3-208ENST00000490999 ANKIB1Q9P2G1 1089 aa20■□□□□ 0.79
SCAMP3-208ENST00000490999 POLR2AP24928 1970 aaKnown RBP20■□□□□ 0.79
SCAMP3-208ENST00000490999 ZNF280AP59817 542 aaPredicted RBP19.99■□□□□ 0.79
SCAMP3-208ENST00000490999 RSBN1LQ6PCB5 846 aaPredicted RBP19.99■□□□□ 0.79
SCAMP3-208ENST00000490999 AKAP11Q9UKA4 1901 aa19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 CHL1O00533 1208 aa19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 TBC1D8O95759 1140 aa19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 MKRN3Q13064 507 aaKnown RBP19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 PRAMEF18Q5VWM3 479 aa19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 GGA1Q9UJY5 639 aa19.98■□□□□ 0.79
SCAMP3-208ENST00000490999 HTTP42858 3142 aa19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 ZNF609O15014 1411 aa19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 ZNF296Q8WUU4 475 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 JARID2Q92833 1246 aaPredicted RBP19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 MYOZ2Q9NPC6 264 aa19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 PODXL2Q9NZ53 605 aa19.97■□□□□ 0.79
SCAMP3-208ENST00000490999 UBE2Q2LH0YL09 131 aa19.96■□□□□ 0.79
SCAMP3-208ENST00000490999 DBF4Q9UBU7 674 aaPredicted RBP19.96■□□□□ 0.79
SCAMP3-208ENST00000490999 HDAC9Q9UKV0 1011 aa19.96■□□□□ 0.79
SCAMP3-208ENST00000490999 USP17L8P0C7I0 530 aa19.95■□□□□ 0.78
SCAMP3-208ENST00000490999 AGBL3Q8NEM8 1001 aa19.95■□□□□ 0.78
SCAMP3-208ENST00000490999 FKBP1BP68106 108 aa19.94■□□□□ 0.78
SCAMP3-208ENST00000490999 MXD3Q9BW11 206 aa19.94■□□□□ 0.78
SCAMP3-208ENST00000490999 TRIM35Q9UPQ4 493 aa19.94■□□□□ 0.78
SCAMP3-208ENST00000490999 MKI67P46013 3256 aaKnown RBP19.94■□□□□ 0.78
SCAMP3-208ENST00000490999 WTIPA6NIX2 430 aaPredicted RBP19.93■□□□□ 0.78
SCAMP3-208ENST00000490999 TTLL12Q14166 644 aaPredicted RBP19.93■□□□□ 0.78
SCAMP3-208ENST00000490999 ZBTB38Q8NAP3 1195 aaPredicted RBP19.93■□□□□ 0.78
SCAMP3-208ENST00000490999 GMLQ99445 158 aa19.93■□□□□ 0.78
SCAMP3-208ENST00000490999 NBPF9Q3BBW0 867 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 DUSP27Q5VZP5 1158 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 RIC3Q7Z5B4 369 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 REM2Q8IYK8 340 aaPredicted RBP19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 MYD88Q99836 296 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 HYPKQ9NX55 129 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 PITPNM2Q9BZ72 1349 aa19.92■□□□□ 0.78
SCAMP3-208ENST00000490999 PSME4Q14997 1843 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 HOXB7P09629 217 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 GOLGA2Q08379 1002 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 TRIM28Q13263 835 aaKnown RBP19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 CCDC152Q4G0S7 254 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 FBXW7Q969H0 707 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 PHAXQ9H814 394 aaKnown RBP19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 XDHP47989 1333 aa19.91■□□□□ 0.78
SCAMP3-208ENST00000490999 USP17L3A6NCW0 530 aa19.9■□□□□ 0.78
SCAMP3-208ENST00000490999 USP17L4A6NCW7 530 aa19.9■□□□□ 0.78
SCAMP3-208ENST00000490999 SASH1O94885 1247 aa19.9■□□□□ 0.78
SCAMP3-208ENST00000490999 USP17L1Q7RTZ2 530 aa19.9■□□□□ 0.78
SCAMP3-208ENST00000490999 BRCA2P51587 3418 aa19.9■□□□□ 0.78
SCAMP3-208ENST00000490999 GPR25O00155 361 aa19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 PRKG1Q13976 671 aa19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 PKN2Q16513 984 aaKnown RBP19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 R3HDMLQ9H3Y0 253 aa19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 MBIPQ9NS73 344 aa19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 CENPFP49454 3210 aa19.89■□□□□ 0.77
SCAMP3-208ENST00000490999 ANKRD18AQ8IVF6 992 aa19.88■□□□□ 0.77
SCAMP3-208ENST00000490999 PCCAP05165 728 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-208ENST00000490999 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.87■□□□□ 0.77
SCAMP3-208ENST00000490999 FZD1Q9UP38 647 aa19.87■□□□□ 0.77
SCAMP3-208ENST00000490999 MED23Q9ULK4 1368 aa19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 ZNF646O15015 1829 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 ELL2O00472 640 aaPredicted RBP19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 PDE8AO60658 829 aa19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 ATP2B4P23634 1241 aa19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 DACT2Q5SW24 774 aa19.86■□□□□ 0.77
SCAMP3-208ENST00000490999 FBXO46Q6PJ61 603 aaPredicted RBP19.86■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms