RNA–Protein interactions for RNA: ENST00000490716.5

SUPT20H-220, Transcript of SPT20 homolog, SAGA complex component, humanhuman

TSL 5

Gene SUPT20H, Length 3,811 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT20H-220ENST00000490716 SIPA1L1O43166 1804 aa11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 FGFR2P21802 821 aa11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 FAM161AQ3B820 660 aa11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 ZBED3Q96IU2 234 aaPredicted RBP11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 C1QTNF8P60827 252 aa11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 DDX46Q7L014 1031 aaKnown RBP11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 ATG9AQ7Z3C6 839 aa11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 NPM2Q86SE8 214 aaKnown RBP11.7□□□□□ -0.54
SUPT20H-220ENST00000490716 RLBP1P12271 317 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 ITGA6P23229 1130 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 DNAJC5GQ8N7S2 189 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 SRCIN1Q9C0H9 1055 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 DCAF8L1A6NGE4 600 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 VIL1P09327 827 aaKnown RBP11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 AOC3Q16853 763 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 TXNRD3Q86VQ6 643 aa11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 PELP1Q8IZL8 1130 aaKnown RBP11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 BICC1Q9H694 974 aaKnown RBP11.69□□□□□ -0.54
SUPT20H-220ENST00000490716 HSP90B1P14625 803 aaKnown RBP11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 NEXNQ0ZGT2 675 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 XDHP47989 1333 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 KLRK1P26718 216 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 PTPN12Q05209 780 aaKnown RBP11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 KCNQ5Q9NR82 932 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 PHIPQ8WWQ0 1821 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 ITGBL1O95965 494 aaPredicted RBP11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 IL1R1P14778 569 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 POLA2Q14181 598 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 ATF7IPQ6VMQ6 1270 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 MPNDQ8N594 471 aa11.68□□□□□ -0.54
SUPT20H-220ENST00000490716 CXCL9Q07325 125 aa11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 ZBTB7BO15156 539 aaPredicted RBP11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 DDNO94850 711 aaPredicted RBP11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 CCT4P50991 539 aaKnown RBP11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 ZNF280AP59817 542 aaPredicted RBP11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 SUPT20HQ8NEM7 779 aa11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 ZNRF3Q9ULT6 936 aa11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 FSTL1Q12841 308 aa11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 TAF1DQ9H5J8 278 aaPredicted RBP11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 ZNF804BA4D1E1 1349 aa11.67□□□□□ -0.54
SUPT20H-220ENST00000490716 TOMM70O94826 608 aa11.66□□□□□ -0.54
SUPT20H-220ENST00000490716 BCL2L13Q9BXK5 485 aa11.66□□□□□ -0.54
SUPT20H-220ENST00000490716 KDM2BQ8NHM5 1336 aa11.66□□□□□ -0.54
SUPT20H-220ENST00000490716 HIRAP54198 1017 aaPredicted RBP11.66□□□□□ -0.54
SUPT20H-220ENST00000490716 FKBP1AP62942 108 aaKnown RBP11.66□□□□□ -0.54
SUPT20H-220ENST00000490716 MYH7P12883 1935 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 POTEIP0CG38 1075 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 POTEJP0CG39 1038 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 RRAGCQ9HB90 399 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 SMC4Q9NTJ3 1288 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 LEMD3Q9Y2U8 911 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 HNRNPUQ00839 825 aaKnown RBP eCLIP11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 CHRNDQ07001 517 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 RTL5Q5HYW3 569 aaPredicted RBP11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 LMBR1LQ6UX01 489 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 DPP8Q6V1X1 898 aaPredicted RBP11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 FBXO3Q9UK99 471 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 CIAO1O76071 339 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 ATP2B4P23634 1241 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 ANKRD18AQ8IVF6 992 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 MEIS3Q99687 375 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 API5Q9BZZ5 524 aaKnown RBP11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 GPRC5DQ9NZD1 345 aa11.65□□□□□ -0.54
SUPT20H-220ENST00000490716 DPF2Q92785 391 aa11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 GTF2E1P29083 439 aaPredicted RBP11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 PUS3Q9BZE2 481 aaKnown RBP11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 GPBP1L1Q9HC44 474 aaPredicted RBP11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 COPRSQ9NQ92 184 aa11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 MYH2Q9UKX2 1941 aa11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 SSC5DA1L4H1 1573 aa11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 DACT2Q5SW24 774 aa11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 CDC5LQ99459 802 aaKnown RBP11.64□□□□□ -0.55
SUPT20H-220ENST00000490716 GPR101Q96P66 508 aaPredicted RBP11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 FAM205AQ6ZU69 1335 aa11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 SHTN1A0MZ66 631 aa11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 FBXO33Q7Z6M2 555 aa11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 ZNF219Q9P2Y4 722 aaPredicted RBP11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 ECE2O60344 883 aa11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 ZNF594Q96JF6 807 aaPredicted RBP11.63□□□□□ -0.55
SUPT20H-220ENST00000490716 VEGFAP15692 232 aaPredicted RBP11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 EGFRP00533 1210 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 LRRC24Q50LG9 513 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 TMEM57Q8N5G2 664 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 RFX7Q2KHR2 1363 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 PSMD14O00487 310 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 WASHC4Q2M389 1173 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 MTMR14Q8NCE2 650 aa11.62□□□□□ -0.55
SUPT20H-220ENST00000490716 MROH5Q6ZUA9 1318 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 CERS5Q8N5B7 392 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 RPS12P25398 132 aaKnown RBP11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 TDRD7Q8NHU6 1098 aaKnown RBP11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 GGA1Q9UJY5 639 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 ANKRD18BA2A2Z9 1011 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 PPIP5K2O43314 1243 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 PODNQ7Z5L7 613 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 SIRT2Q8IXJ6 389 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 SSH3Q8TE77 659 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 ANKRD2Q9GZV1 360 aa11.61□□□□□ -0.55
SUPT20H-220ENST00000490716 NOP58Q9Y2X3 529 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms