RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CHADLQ6NUI6 762 aa19.64■□□□□ 0.73
PCCB-218ENST00000490504 COL4A1P02462 1669 aa19.63■□□□□ 0.73
PCCB-218ENST00000490504 KIAA2012Q0VF49 1180 aa19.63■□□□□ 0.73
PCCB-218ENST00000490504 FKBP5Q13451 457 aaPredicted RBP19.63■□□□□ 0.73
PCCB-218ENST00000490504 PTPRCP08575 1304 aa19.63■□□□□ 0.73
PCCB-218ENST00000490504 EPHX2P34913 555 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 CCDC152Q4G0S7 254 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 ZNRF3Q9ULT6 936 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 NSFL1CQ9UNZ2 370 aaKnown RBP19.62■□□□□ 0.73
PCCB-218ENST00000490504 CDHR2Q9BYE9 1310 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 GPSM2P81274 684 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 EAPPQ56P03 285 aaPredicted RBP19.62■□□□□ 0.73
PCCB-218ENST00000490504 DNAAF4Q8WXU2 420 aa19.62■□□□□ 0.73
PCCB-218ENST00000490504 CHMP4BQ9H444 224 aaKnown RBP19.62■□□□□ 0.73
PCCB-218ENST00000490504 H7C1W4 665 aa19.61■□□□□ 0.73
PCCB-218ENST00000490504 CXCL9Q07325 125 aa19.61■□□□□ 0.73
PCCB-218ENST00000490504 LDHDQ86WU2 507 aa19.61■□□□□ 0.73
PCCB-218ENST00000490504 SCNN1DP51172 638 aa19.6■□□□□ 0.73
PCCB-218ENST00000490504 POLLQ9UGP5 575 aa19.6■□□□□ 0.73
PCCB-218ENST00000490504 PCDHB15Q9Y5E8 787 aa19.6■□□□□ 0.73
PCCB-218ENST00000490504 TAF1P21675 1872 aa19.6■□□□□ 0.73
PCCB-218ENST00000490504 IGHDP01880 384 aa19.59■□□□□ 0.73
PCCB-218ENST00000490504 CTSWP56202 376 aa19.59■□□□□ 0.73
PCCB-218ENST00000490504 GCKRQ14397 625 aa19.59■□□□□ 0.73
PCCB-218ENST00000490504 UBE3BQ7Z3V4 1068 aa19.59■□□□□ 0.73
PCCB-218ENST00000490504 F6X3S4 739 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 C6orf229H3BNL8 230 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 EPS15P42566 896 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 TTLL11Q8NHH1 800 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 ZBTB40Q9NUA8 1239 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 CLEC11AQ9Y240 323 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 DUOX1Q9NRD9 1551 aa19.58■□□□□ 0.73
PCCB-218ENST00000490504 RAD17O75943 681 aa19.58■□□□□ 0.72
PCCB-218ENST00000490504 WASHC4Q2M389 1173 aa19.58■□□□□ 0.72
PCCB-218ENST00000490504 PNMA8AQ86V59 439 aaPredicted RBP19.58■□□□□ 0.72
PCCB-218ENST00000490504 LINS1Q8NG48 757 aa19.58■□□□□ 0.72
PCCB-218ENST00000490504 GPR101Q96P66 508 aaPredicted RBP19.58■□□□□ 0.72
PCCB-218ENST00000490504 YDJCA8MPS7 323 aa19.57■□□□□ 0.72
PCCB-218ENST00000490504 RIMBP2O15034 1052 aa19.57■□□□□ 0.72
PCCB-218ENST00000490504 LMOD1P29536 600 aaPredicted RBP19.57■□□□□ 0.72
PCCB-218ENST00000490504 CASP7P55210 303 aa19.57■□□□□ 0.72
PCCB-218ENST00000490504 TBC1D16Q8TBP0 767 aa19.57■□□□□ 0.72
PCCB-218ENST00000490504 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
PCCB-218ENST00000490504 GREM2Q9H772 168 aa19.57■□□□□ 0.72
PCCB-218ENST00000490504 CIAPIN1Q6FI81 312 aa19.56■□□□□ 0.72
PCCB-218ENST00000490504 ANKRD18AQ8IVF6 992 aa19.56■□□□□ 0.72
PCCB-218ENST00000490504 KLRG1Q96E93 195 aa19.56■□□□□ 0.72
PCCB-218ENST00000490504 PODXL2Q9NZ53 605 aa19.56■□□□□ 0.72
PCCB-218ENST00000490504 BEND3Q5T5X7 828 aa19.55■□□□□ 0.72
PCCB-218ENST00000490504 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
PCCB-218ENST00000490504 DBNDD1Q9H9R9 158 aa19.55■□□□□ 0.72
PCCB-218ENST00000490504 SCN4AP35499 1836 aa19.55■□□□□ 0.72
PCCB-218ENST00000490504 ZBTB7BO15156 539 aaPredicted RBP19.54■□□□□ 0.72
PCCB-218ENST00000490504 ITGBL1O95965 494 aaPredicted RBP19.54■□□□□ 0.72
PCCB-218ENST00000490504 GMPSP49915 693 aaPredicted RBP19.54■□□□□ 0.72
PCCB-218ENST00000490504 PLA2G12BQ9BX93 195 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 GPRC5DQ9NZD1 345 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 ANKIB1Q9P2G1 1089 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 LRRC37AA6NMS7 1700 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 PASKQ96RG2 1323 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 DOK7Q18PE1 504 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 MAP1SQ66K74 1059 aaPredicted RBP19.54■□□□□ 0.72
PCCB-218ENST00000490504 CDC5LQ99459 802 aaKnown RBP19.54■□□□□ 0.72
PCCB-218ENST00000490504 EYA3Q99504 573 aa19.54■□□□□ 0.72
PCCB-218ENST00000490504 UFL1O94874 794 aa19.53■□□□□ 0.72
PCCB-218ENST00000490504 HDAC1Q13547 482 aaPredicted RBP19.53■□□□□ 0.72
PCCB-218ENST00000490504 TNIP1Q15025 636 aa19.53■□□□□ 0.72
PCCB-218ENST00000490504 KCNQ5Q9NR82 932 aa19.53■□□□□ 0.72
PCCB-218ENST00000490504 GGA1Q9UJY5 639 aa19.53■□□□□ 0.72
PCCB-218ENST00000490504 LTBP1Q14766 1721 aa19.53■□□□□ 0.72
PCCB-218ENST00000490504 CNTROBQ8N137 903 aa19.52■□□□□ 0.72
PCCB-218ENST00000490504 RTL9Q8NET4 1388 aa19.52■□□□□ 0.72
PCCB-218ENST00000490504 CSF1RP07333 972 aa19.51■□□□□ 0.71
PCCB-218ENST00000490504 USP50Q70EL3 339 aaPredicted RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 ZC3H12CQ9C0D7 883 aaKnown RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 BSDC1Q9NW68 430 aaPredicted RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 WTIPA6NIX2 430 aaPredicted RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 ECE2O60344 883 aa19.51■□□□□ 0.71
PCCB-218ENST00000490504 ADARB2Q9NS39 739 aaKnown RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 MINPP1Q9UNW1 487 aa19.51■□□□□ 0.71
PCCB-218ENST00000490504 ZBTB12Q9Y330 459 aaPredicted RBP19.51■□□□□ 0.71
PCCB-218ENST00000490504 XDHP47989 1333 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 SHTN1A0MZ66 631 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 PSMD14O00487 310 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 ITGA6P23229 1130 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 FAM161AQ3B820 660 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 CREBZFQ9NS37 354 aa19.5■□□□□ 0.71
PCCB-218ENST00000490504 SLC4A10Q6U841 1118 aa19.49■□□□□ 0.71
PCCB-218ENST00000490504 JMYQ8N9B5 988 aa19.49■□□□□ 0.71
PCCB-218ENST00000490504 ADAMTSL1Q8N6G6 1762 aa19.49■□□□□ 0.71
PCCB-218ENST00000490504 ATP2B4P23634 1241 aa19.48■□□□□ 0.71
PCCB-218ENST00000490504 CCT4P50991 539 aaKnown RBP19.48■□□□□ 0.71
PCCB-218ENST00000490504 FOXO4P98177 505 aa19.48■□□□□ 0.71
PCCB-218ENST00000490504 CNOT7Q9UIV1 285 aaKnown RBP19.48■□□□□ 0.71
PCCB-218ENST00000490504 IGHMBP2P38935 993 aaKnown RBP19.47■□□□□ 0.71
PCCB-218ENST00000490504 SKAP1Q86WV1 359 aa19.47■□□□□ 0.71
PCCB-218ENST00000490504 GRM8O00222 908 aa19.47■□□□□ 0.71
PCCB-218ENST00000490504 HIRAP54198 1017 aaPredicted RBP19.47■□□□□ 0.71
PCCB-218ENST00000490504 FMR1Q06787 632 aaKnown RBP eCLIP19.47■□□□□ 0.714e-13■■■■■ 26.9
PCCB-218ENST00000490504 EPHA10Q5JZY3 1008 aa19.47■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms