RNA–Protein interactions for RNA: ENST00000489614.5

NOD1-208, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 2

Gene NOD1, Length 3,098 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-208ENST00000489614 CSF1RP07333 972 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 NLRP10Q86W26 655 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 CWC25Q9NXE8 425 aaPredicted RBP11.79□□□□□ -0.52
NOD1-208ENST00000489614 STAP2Q9UGK3 403 aa11.79□□□□□ -0.52
NOD1-208ENST00000489614 ZNF646O15015 1829 aaPredicted RBP11.79□□□□□ -0.52
NOD1-208ENST00000489614 COL11A2P13942 1736 aaPredicted RBP11.79□□□□□ -0.52
NOD1-208ENST00000489614 NEXNQ0ZGT2 675 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 SYTL4Q96C24 671 aaPredicted RBP11.78□□□□□ -0.52
NOD1-208ENST00000489614 C22orf23Q9BZE7 217 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 TMX1Q9H3N1 280 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 LRRC4BQ9NT99 713 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 AOX1Q06278 1338 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 RAB11FIP3O75154 756 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 RNF214Q8ND24 703 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 COPRSQ9NQ92 184 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 FAM182BQ5T319 152 aa11.78□□□□□ -0.52
NOD1-208ENST00000489614 BCCIPQ9P287 314 aaKnown RBP eCLIP11.78□□□□□ -0.52
NOD1-208ENST00000489614 CCDC66A2RUB6 948 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 KIAA2012Q0VF49 1180 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 POTEAQ6S8J7 498 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 PROM2Q8N271 834 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 ZBTB38Q8NAP3 1195 aaPredicted RBP11.77□□□□□ -0.53
NOD1-208ENST00000489614 ZBTB3Q9H5J0 574 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 A0A0G2JS52 829 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 RPS6KA4O75676 772 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 HSP90AB3PQ58FF7 597 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 SLC27A3Q5K4L6 730 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 KIF6Q6ZMV9 814 aa11.77□□□□□ -0.53
NOD1-208ENST00000489614 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.77□□□□□ -0.53
NOD1-208ENST00000489614 GSPT1P15170 499 aaKnown RBP11.76□□□□□ -0.53
NOD1-208ENST00000489614 BMP2KLQ5H9B9 411 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 CLEC4GQ6UXB4 293 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 DZIP3Q86Y13 1208 aaKnown RBP11.76□□□□□ -0.53
NOD1-208ENST00000489614 MYO5AQ9Y4I1 1855 aaKnown RBP11.76□□□□□ -0.53
NOD1-208ENST00000489614 ATP5J2-PTCD1G3V325 749 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 PLSCR1O15162 318 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 PSEN1P49768 467 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 PTPN12Q05209 780 aaKnown RBP11.76□□□□□ -0.53
NOD1-208ENST00000489614 SLC20A2Q08357 652 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 AK7Q96M32 723 aa11.76□□□□□ -0.53
NOD1-208ENST00000489614 CLGNO14967 610 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 FAM193AP78312 1265 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 C9orf78Q9NZ63 289 aaPredicted RBP11.75□□□□□ -0.53
NOD1-208ENST00000489614 CCDC39Q9UFE4 941 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 MYH13Q9UKX3 1938 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 NTSR2O95665 410 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 LNPKQ9C0E8 428 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 ZNF609O15014 1411 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 A0A087WZG4 1122 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 GOLGA6L22H0YM25 854 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 SASH1O94885 1247 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 HMGN5P82970 282 aaKnown RBP11.75□□□□□ -0.53
NOD1-208ENST00000489614 ANKRD45Q5TZF3 282 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 PDLIM2Q96JY6 352 aa11.75□□□□□ -0.53
NOD1-208ENST00000489614 SRGAP3O43295 1099 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 SLFN14P0C7P3 912 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 ADRA2BP18089 450 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 C16orf71Q8IYS4 520 aaPredicted RBP11.74□□□□□ -0.53
NOD1-208ENST00000489614 OTUD7AQ8TE49 926 aaPredicted RBP11.74□□□□□ -0.53
NOD1-208ENST00000489614 SSFA2P28290 1259 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 UBE3BQ7Z3V4 1068 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 NARFQ9UHQ1 456 aa11.74□□□□□ -0.53
NOD1-208ENST00000489614 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP11.74□□□□□ -0.53
NOD1-208ENST00000489614 MCM5P33992 734 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 TTC22Q5TAA0 569 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 ATG9AQ7Z3C6 839 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 PRIMPOLQ96LW4 560 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 LRRCC1Q9C099 1032 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 EXOC6BQ9Y2D4 811 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 SMARCA5O60264 1052 aaPredicted RBP11.73□□□□□ -0.53
NOD1-208ENST00000489614 RXRBP28702 533 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 ZSCAN23Q3MJ62 389 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 RHPN1Q8TCX5 695 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 AKT1S1Q96B36 256 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 CCNL1Q9UK58 526 aaPredicted RBP11.73□□□□□ -0.53
NOD1-208ENST00000489614 SRCAPQ6ZRS2 3230 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 CIAO1O76071 339 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 MMP14P50281 582 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
NOD1-208ENST00000489614 RBM27Q9P2N5 1060 aaKnown RBP11.72□□□□□ -0.53
NOD1-208ENST00000489614 FBXO3Q9UK99 471 aa11.72□□□□□ -0.53
NOD1-208ENST00000489614 MAST2Q6P0Q8 1798 aa11.72□□□□□ -0.53
NOD1-208ENST00000489614 PARP10Q53GL7 1025 aa11.72□□□□□ -0.53
NOD1-208ENST00000489614 SUSD4Q5VX71 490 aa11.72□□□□□ -0.53
NOD1-208ENST00000489614 TMED8Q6PL24 325 aaPredicted RBP11.72□□□□□ -0.53
NOD1-208ENST00000489614 KIF1BPQ96EK5 621 aa11.72□□□□□ -0.53
NOD1-208ENST00000489614 PDE1AP54750 535 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 RAB3GAP1Q15042 981 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 KLHL40Q2TBA0 621 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 SLC10A5Q5PT55 438 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 MCTP1Q6DN14 999 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 OGFRQ9NZT2 677 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 TBC1D2BQ9UPU7 963 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 NOLC1Q14978 699 aaKnown RBP eCLIP11.71□□□□□ -0.53
NOD1-208ENST00000489614 HSP90AB4PQ58FF6 505 aa11.71□□□□□ -0.53
NOD1-208ENST00000489614 BRCA1P38398 1863 aaKnown RBP11.71□□□□□ -0.54
NOD1-208ENST00000489614 KCNQ4P56696 695 aa11.71□□□□□ -0.54
NOD1-208ENST00000489614 GPR108Q9NPR9 543 aa11.71□□□□□ -0.54
NOD1-208ENST00000489614 PA2G4Q9UQ80 394 aaKnown RBP11.71□□□□□ -0.54
NOD1-208ENST00000489614 CACNA1SQ13698 1873 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms