RNA–Protein interactions for RNA: ENST00000489485.5

CLDN11-209, Transcript of claudin 11, humanhuman

TSL 2

Gene CLDN11, Length 1,854 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-209ENST00000489485 OS9Q13438 667 aaPredicted RBP17.65■□□□□ 0.42
CLDN11-209ENST00000489485 LRRC24Q50LG9 513 aa17.65■□□□□ 0.42
CLDN11-209ENST00000489485 TMX4Q9H1E5 349 aaPredicted RBP17.65■□□□□ 0.42
CLDN11-209ENST00000489485 BCS1LQ9Y276 419 aa17.65■□□□□ 0.42
CLDN11-209ENST00000489485 EYA2O00167 538 aa17.65■□□□□ 0.42
CLDN11-209ENST00000489485 TMC4Q7Z404 712 aa17.65■□□□□ 0.42
CLDN11-209ENST00000489485 KDM2BQ8NHM5 1336 aa17.64■□□□□ 0.41
CLDN11-209ENST00000489485 APBB1O00213 710 aa17.64■□□□□ 0.41
CLDN11-209ENST00000489485 C21orf2O43822 256 aa17.64■□□□□ 0.41
CLDN11-209ENST00000489485 SLC51AQ86UW1 340 aa17.64■□□□□ 0.41
CLDN11-209ENST00000489485 ATP6V0A2Q9Y487 856 aa17.64■□□□□ 0.41
CLDN11-209ENST00000489485 OLFM4Q6UX06 510 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 SP8Q8IXZ3 490 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 FBXO3Q9UK99 471 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 MINPP1Q9UNW1 487 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 RIPOR2Q9Y4F9 1068 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 CENPQQ7L2Z9 268 aaPredicted RBP17.63■□□□□ 0.41
CLDN11-209ENST00000489485 ATG9AQ7Z3C6 839 aa17.63■□□□□ 0.41
CLDN11-209ENST00000489485 NOP58Q9Y2X3 529 aaKnown RBP17.63■□□□□ 0.41
CLDN11-209ENST00000489485 CIAO1O76071 339 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 IL15P40933 162 aaPredicted RBP17.62■□□□□ 0.41
CLDN11-209ENST00000489485 CHRNDQ07001 517 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 HSP90AB4PQ58FF6 505 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 METTL24Q5JXM2 366 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 HELBQ8NG08 1087 aaPredicted RBP17.62■□□□□ 0.41
CLDN11-209ENST00000489485 BCL11AQ9H165 835 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 DCTPP1Q9H773 170 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 ANKIB1Q9P2G1 1089 aa17.62■□□□□ 0.41
CLDN11-209ENST00000489485 NSFL1CQ9UNZ2 370 aaKnown RBP17.62■□□□□ 0.41
CLDN11-209ENST00000489485 MROH5Q6ZUA9 1318 aa17.61■□□□□ 0.41
CLDN11-209ENST00000489485 TAF5LO75529 589 aa17.61■□□□□ 0.41
CLDN11-209ENST00000489485 C7orf43Q8WVR3 580 aa17.61■□□□□ 0.41
CLDN11-209ENST00000489485 GCC1Q96CN9 775 aa17.6■□□□□ 0.41
CLDN11-209ENST00000489485 CEP126Q9P2H0 1117 aa17.6■□□□□ 0.41
CLDN11-209ENST00000489485 LRRC37AA6NMS7 1700 aa17.6■□□□□ 0.41
CLDN11-209ENST00000489485 ARFGEF1Q9Y6D6 1849 aa17.59■□□□□ 0.41
CLDN11-209ENST00000489485 ERC1Q8IUD2 1116 aa17.59■□□□□ 0.41
CLDN11-209ENST00000489485 SMC5Q8IY18 1101 aa17.59■□□□□ 0.41
CLDN11-209ENST00000489485 ANKRD2Q9GZV1 360 aa17.59■□□□□ 0.41
CLDN11-209ENST00000489485 SASH1O94885 1247 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 GPSM2P81274 684 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 TFCP2Q12800 502 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 CCDC93Q567U6 631 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 SOGA3Q5TF21 947 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 CC2D2BQ6DHV5 1058 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 MPNDQ8N594 471 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 XDHP47989 1333 aa17.58■□□□□ 0.41
CLDN11-209ENST00000489485 A0A1B0GUL6 1792 aa17.58■□□□□ 0.4
CLDN11-209ENST00000489485 RAB11FIP3O75154 756 aa17.58■□□□□ 0.4
CLDN11-209ENST00000489485 PDE8BO95263 885 aa17.58■□□□□ 0.4
CLDN11-209ENST00000489485 DPP8Q6V1X1 898 aaPredicted RBP17.58■□□□□ 0.4
CLDN11-209ENST00000489485 RHPN1Q8TCX5 695 aa17.58■□□□□ 0.4
CLDN11-209ENST00000489485 KCNJ4P48050 445 aa17.57■□□□□ 0.4
CLDN11-209ENST00000489485 KIF1BPQ96EK5 621 aa17.57■□□□□ 0.4
CLDN11-209ENST00000489485 SNAP23O00161 211 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 GPR162Q16538 588 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 ANKRD45Q5TZF3 282 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 RTKN2Q8IZC4 609 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 VGLL2Q8N8G2 317 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 LRRCC1Q9C099 1032 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 IL1RAPL2Q9NP60 686 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.56■□□□□ 0.4
CLDN11-209ENST00000489485 WTIPA6NIX2 430 aaPredicted RBP17.56■□□□□ 0.4
CLDN11-209ENST00000489485 C6orf229H3BNL8 230 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 PODXL2Q9NZ53 605 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 ZBTB47Q9UFB7 747 aaPredicted RBP17.56■□□□□ 0.4
CLDN11-209ENST00000489485 GGA1Q9UJY5 639 aa17.56■□□□□ 0.4
CLDN11-209ENST00000489485 UFL1O94874 794 aa17.55■□□□□ 0.4
CLDN11-209ENST00000489485 YBX3P16989 372 aaKnown RBP eCLIP17.55■□□□□ 0.4
CLDN11-209ENST00000489485 GRIPAP1Q4V328 841 aa17.55■□□□□ 0.4
CLDN11-209ENST00000489485 SMARCA5O60264 1052 aaPredicted RBP17.54■□□□□ 0.4
CLDN11-209ENST00000489485 PUM3Q15397 648 aaKnown RBP17.54■□□□□ 0.4
CLDN11-209ENST00000489485 POLLQ9UGP5 575 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 AKAP2Q9Y2D5 859 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 LEMD3Q9Y2U8 911 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 ZNF804BA4D1E1 1349 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 ATP2B4P23634 1241 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 SKAP1Q86WV1 359 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 CLASRPQ8N2M8 674 aaKnown RBP17.54■□□□□ 0.4
CLDN11-209ENST00000489485 TBC1D16Q8TBP0 767 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 NEUROD6Q96NK8 337 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 LTBP1Q14766 1721 aa17.54■□□□□ 0.4
CLDN11-209ENST00000489485 FER1L6Q2WGJ9 1857 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 TIMM10P62072 90 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 NUCB1Q02818 461 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 UBE4AQ14139 1066 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 ATP2B3Q16720 1220 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 ARHGAP27Q6ZUM4 889 aa17.53■□□□□ 0.4
CLDN11-209ENST00000489485 GPR101Q96P66 508 aaPredicted RBP17.53■□□□□ 0.4
CLDN11-209ENST00000489485 A0A1B0GUL7 405 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 TNNI3KQ59H18 835 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 LPIN2Q92539 896 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 LNPKQ9C0E8 428 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 FPGT-TNNI3KV9GXZ4 949 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 SNED1Q8TER0 1413 aa17.52■□□□□ 0.4
CLDN11-209ENST00000489485 CHD1LQ86WJ1 897 aa17.52■□□□□ 0.39
CLDN11-209ENST00000489485 TAOK3Q9H2K8 898 aa17.52■□□□□ 0.39
CLDN11-209ENST00000489485 DUOX1Q9NRD9 1551 aa17.52■□□□□ 0.39
CLDN11-209ENST00000489485 RIMBP2O15034 1052 aa17.51■□□□□ 0.39
CLDN11-209ENST00000489485 IFIT1P09914 478 aaKnown RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms