RNA–Protein interactions for RNA: ENST00000489469.5

SMIM11A-206, Transcript of small integral membrane protein 11A, humanhuman

TSL 2

Gene SMIM11A, Length 780 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-206ENST00000489469 TAF7LQ5H9L4 462 aa19.37■□□□□ 0.69
SMIM11A-206ENST00000489469 MPHOSPH8Q99549 860 aa19.37■□□□□ 0.69
SMIM11A-206ENST00000489469 BSDC1Q9NW68 430 aaPredicted RBP19.37■□□□□ 0.69
SMIM11A-206ENST00000489469 COG6Q9Y2V7 657 aa19.37■□□□□ 0.69
SMIM11A-206ENST00000489469 TAOK3Q9H2K8 898 aa19.36■□□□□ 0.69
SMIM11A-206ENST00000489469 COL4A1P02462 1669 aa19.36■□□□□ 0.69
SMIM11A-206ENST00000489469 SNED1Q8TER0 1413 aa19.35■□□□□ 0.69
SMIM11A-206ENST00000489469 MTX1Q13505 466 aa19.35■□□□□ 0.69
SMIM11A-206ENST00000489469 PSMD1Q99460 953 aa19.35■□□□□ 0.69
SMIM11A-206ENST00000489469 FKBP4Q02790 459 aaKnown RBP eCLIP19.34■□□□□ 0.69
SMIM11A-206ENST00000489469 C20orf194Q5TEA3 1177 aa19.34■□□□□ 0.69
SMIM11A-206ENST00000489469 MPNDQ8N594 471 aa19.34■□□□□ 0.69
SMIM11A-206ENST00000489469 SUPT20HQ8NEM7 779 aa19.34■□□□□ 0.69
SMIM11A-206ENST00000489469 LTBP1Q14766 1721 aa19.34■□□□□ 0.69
SMIM11A-206ENST00000489469 NFKBIEO00221 500 aa19.33■□□□□ 0.68
SMIM11A-206ENST00000489469 DPP8Q6V1X1 898 aaPredicted RBP19.33■□□□□ 0.68
SMIM11A-206ENST00000489469 A0A1B0GUL6 1792 aa19.33■□□□□ 0.68
SMIM11A-206ENST00000489469 OLFM4Q6UX06 510 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 LDHAL6AQ6ZMR3 332 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 ANKRD2Q9GZV1 360 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 VPS33BQ9H267 617 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 PODXL2Q9NZ53 605 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 FBXO3Q9UK99 471 aa19.32■□□□□ 0.68
SMIM11A-206ENST00000489469 XDHP47989 1333 aa19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 LMNB1P20700 586 aa19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 RTFDC1Q9BY42 306 aaPredicted RBP19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 CNNM1Q9NRU3 951 aa19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 MINPP1Q9UNW1 487 aa19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 NSFL1CQ9UNZ2 370 aaKnown RBP19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 SUPT16HQ9Y5B9 1047 aaKnown RBP19.31■□□□□ 0.68
SMIM11A-206ENST00000489469 SRGAP3O43295 1099 aa19.3■□□□□ 0.68
SMIM11A-206ENST00000489469 RASSF7Q02833 373 aa19.3■□□□□ 0.68
SMIM11A-206ENST00000489469 ZBTB40Q9NUA8 1239 aa19.3■□□□□ 0.68
SMIM11A-206ENST00000489469 ANKIB1Q9P2G1 1089 aa19.3■□□□□ 0.68
SMIM11A-206ENST00000489469 DUOX1Q9NRD9 1551 aa19.29■□□□□ 0.68
SMIM11A-206ENST00000489469 RFX5P48382 616 aaPredicted RBP19.29■□□□□ 0.68
SMIM11A-206ENST00000489469 ATP8B2P98198 1209 aa19.29■□□□□ 0.68
SMIM11A-206ENST00000489469 ZNF594Q96JF6 807 aaPredicted RBP19.29■□□□□ 0.68
SMIM11A-206ENST00000489469 UTRNP46939 3433 aa19.29■□□□□ 0.68
SMIM11A-206ENST00000489469 MROH5Q6ZUA9 1318 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 ATP2B4P23634 1241 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 GPSM2P81274 684 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 PTPN12Q05209 780 aaKnown RBP19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 EYA3Q99504 573 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 C1orf115Q9H7X2 142 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 COPRSQ9NQ92 184 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 GGA1Q9UJY5 639 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 TIAM2Q8IVF5 1701 aa19.28■□□□□ 0.68
SMIM11A-206ENST00000489469 ZC3H4Q9UPT8 1303 aaKnown RBP19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 CIAO1O76071 339 aa19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 IARSP41252 1262 aaKnown RBP19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 CHRNDQ07001 517 aa19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 AAMPQ13685 434 aa19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 RPAP2Q8IXW5 612 aaPredicted RBP19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 RNF181Q9P0P0 153 aa19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 LEMD3Q9Y2U8 911 aa19.27■□□□□ 0.68
SMIM11A-206ENST00000489469 C6orf229H3BNL8 230 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 EYA2O00167 538 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 CENPBP07199 599 aaPredicted RBP19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 C9orf131Q5VYM1 1079 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 CEP85Q6P2H3 762 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 TBC1D16Q8TBP0 767 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 SSH3Q8TE77 659 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 ZNF277Q9NRM2 450 aaPredicted RBP19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 RIPOR2Q9Y4F9 1068 aa19.26■□□□□ 0.67
SMIM11A-206ENST00000489469 UFL1O94874 794 aa19.25■□□□□ 0.67
SMIM11A-206ENST00000489469 SLC51AQ86UW1 340 aa19.25■□□□□ 0.67
SMIM11A-206ENST00000489469 PNMA6EA0A0J9YXQ4 647 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 PPIP5K2O43314 1243 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 HMMRO75330 724 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 IL15P40933 162 aaPredicted RBP19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 KCNJ4P48050 445 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 KIAA2012Q0VF49 1180 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 WASHC4Q2M389 1173 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 LARGE2Q8N3Y3 721 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 KLHDC4Q8TBB5 520 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 JDP2Q8WYK2 163 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 CRBNQ96SW2 442 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 PUS3Q9BZE2 481 aaKnown RBP19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 POLLQ9UGP5 575 aa19.24■□□□□ 0.67
SMIM11A-206ENST00000489469 LRRC24Q50LG9 513 aa19.23■□□□□ 0.67
SMIM11A-206ENST00000489469 METTL24Q5JXM2 366 aa19.23■□□□□ 0.67
SMIM11A-206ENST00000489469 ZC3H12CQ9C0D7 883 aaKnown RBP19.23■□□□□ 0.67
SMIM11A-206ENST00000489469 ZNF804BA4D1E1 1349 aa19.23■□□□□ 0.67
SMIM11A-206ENST00000489469 MED23Q9ULK4 1368 aa19.22■□□□□ 0.67
SMIM11A-206ENST00000489469 PRELPP51888 382 aa19.22■□□□□ 0.67
SMIM11A-206ENST00000489469 PDE8BO95263 885 aa19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 G3BP1Q13283 466 aaKnown RBP eCLIP19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 UBE4AQ14139 1066 aa19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 AOC3Q16853 763 aa19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 NIM1KQ8IY84 436 aa19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 SIL1Q9H173 461 aa19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 PA2G4Q9UQ80 394 aaKnown RBP19.21■□□□□ 0.67
SMIM11A-206ENST00000489469 TAF5LO75529 589 aa19.2■□□□□ 0.66
SMIM11A-206ENST00000489469 C15orf52Q6ZUT6 534 aaKnown RBP19.2■□□□□ 0.66
SMIM11A-206ENST00000489469 ATG9AQ7Z3C6 839 aa19.2■□□□□ 0.66
SMIM11A-206ENST00000489469 HELBQ8NG08 1087 aaPredicted RBP19.2■□□□□ 0.66
SMIM11A-206ENST00000489469 CEP126Q9P2H0 1117 aa19.2■□□□□ 0.66
SMIM11A-206ENST00000489469 G3V3G9 751 aa19.19■□□□□ 0.66
SMIM11A-206ENST00000489469 HSP90AB4PQ58FF6 505 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms