RNA–Protein interactions for RNA: ENST00000489442.5

CCL28-202, Transcript of C-C motif chemokine ligand 28, humanhuman

TSL 1 (best)

Gene CCL28, Length 1,342 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCL28-202ENST00000489442 KIF16BQ96L93 1317 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 COL4A5P29400 1685 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 UFL1O94874 794 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 FOXO4P98177 505 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 CCDC57Q2TAC2 916 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 TBC1D16Q8TBP0 767 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 PODXL2Q9NZ53 605 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 SCN4AP35499 1836 aa16.87■□□□□ 0.29
CCL28-202ENST00000489442 POTECB2RU33 542 aa16.86■□□□□ 0.29
CCL28-202ENST00000489442 NBPF7P0C2Y1 421 aaPredicted RBP16.86■□□□□ 0.29
CCL28-202ENST00000489442 CCT4P50991 539 aaKnown RBP16.86■□□□□ 0.29
CCL28-202ENST00000489442 BRPF1P55201 1214 aaPredicted RBP16.86■□□□□ 0.29
CCL28-202ENST00000489442 TAF7LQ5H9L4 462 aa16.86■□□□□ 0.29
CCL28-202ENST00000489442 L3MBTL3Q96JM7 780 aaPredicted RBP16.86■□□□□ 0.29
CCL28-202ENST00000489442 MINPP1Q9UNW1 487 aa16.86■□□□□ 0.29
CCL28-202ENST00000489442 IPO8O15397 1037 aaKnown RBP16.85■□□□□ 0.29
CCL28-202ENST00000489442 ATP2B4P23634 1241 aa16.85■□□□□ 0.29
CCL28-202ENST00000489442 LMOD1P29536 600 aaPredicted RBP16.85■□□□□ 0.29
CCL28-202ENST00000489442 TNIP1Q15025 636 aa16.85■□□□□ 0.29
CCL28-202ENST00000489442 FRAT1Q92837 279 aaPredicted RBP16.85■□□□□ 0.29
CCL28-202ENST00000489442 DUOX1Q9NRD9 1551 aa16.85■□□□□ 0.29
CCL28-202ENST00000489442 HACL1Q9UJ83 578 aa16.85■□□□□ 0.29
CCL28-202ENST00000489442 RAD17O75943 681 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 CXCL9Q07325 125 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 EPHA10Q5JZY3 1008 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 CIAPIN1Q6FI81 312 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 SMC1BQ8NDV3 1235 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 SUCLG2Q96I99 432 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 GPR101Q96P66 508 aaPredicted RBP16.84■□□□□ 0.29
CCL28-202ENST00000489442 DBNDD1Q9H9R9 158 aa16.84■□□□□ 0.29
CCL28-202ENST00000489442 UTYO14607 1347 aa16.83■□□□□ 0.29
CCL28-202ENST00000489442 FSTL1Q12841 308 aa16.83■□□□□ 0.28
CCL28-202ENST00000489442 DOK7Q18PE1 504 aa16.83■□□□□ 0.28
CCL28-202ENST00000489442 ARHGAP45Q92619 1136 aa16.83■□□□□ 0.28
CCL28-202ENST00000489442 ANKRD2Q9GZV1 360 aa16.83■□□□□ 0.28
CCL28-202ENST00000489442 LTBP1Q14766 1721 aa16.83■□□□□ 0.28
CCL28-202ENST00000489442 BCAR3O75815 825 aa16.82■□□□□ 0.28
CCL28-202ENST00000489442 EPHX2P34913 555 aa16.82■□□□□ 0.28
CCL28-202ENST00000489442 KCNJ4P48050 445 aa16.82■□□□□ 0.28
CCL28-202ENST00000489442 EAPPQ56P03 285 aaPredicted RBP16.82■□□□□ 0.28
CCL28-202ENST00000489442 LDHAL6AQ6ZMR3 332 aa16.82■□□□□ 0.28
CCL28-202ENST00000489442 USP44Q9H0E7 712 aa16.82■□□□□ 0.28
CCL28-202ENST00000489442 TAF1DQ9H5J8 278 aaPredicted RBP16.82■□□□□ 0.28
CCL28-202ENST00000489442 BICC1Q9H694 974 aaKnown RBP16.82■□□□□ 0.28
CCL28-202ENST00000489442 ECE2O60344 883 aa16.81■□□□□ 0.28
CCL28-202ENST00000489442 HSPA6P17066 643 aa16.81■□□□□ 0.28
CCL28-202ENST00000489442 PNMA8AQ86V59 439 aaPredicted RBP16.81■□□□□ 0.28
CCL28-202ENST00000489442 ZNF594Q96JF6 807 aaPredicted RBP16.81■□□□□ 0.28
CCL28-202ENST00000489442 CNNM1Q9NRU3 951 aa16.81■□□□□ 0.28
CCL28-202ENST00000489442 CLEC11AQ9Y240 323 aa16.81■□□□□ 0.28
CCL28-202ENST00000489442 LEMD3Q9Y2U8 911 aa16.81■□□□□ 0.28
CCL28-202ENST00000489442 YDJCA8MPS7 323 aa16.8■□□□□ 0.28
CCL28-202ENST00000489442 UBTFL1P0CB47 393 aaPredicted RBP16.8■□□□□ 0.28
CCL28-202ENST00000489442 KAZALD1Q96I82 304 aa16.8■□□□□ 0.28
CCL28-202ENST00000489442 HDAC5Q9UQL6 1122 aa16.8■□□□□ 0.28
CCL28-202ENST00000489442 CEP350Q5VT06 3117 aa16.79■□□□□ 0.28
CCL28-202ENST00000489442 CHRNDQ07001 517 aa16.79■□□□□ 0.28
CCL28-202ENST00000489442 CHADLQ6NUI6 762 aa16.79■□□□□ 0.28
CCL28-202ENST00000489442 ZNF804BA4D1E1 1349 aa16.79■□□□□ 0.28
CCL28-202ENST00000489442 PLIN1O60240 522 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 EPS15P42566 896 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 GMPSP49915 693 aaPredicted RBP16.78■□□□□ 0.28
CCL28-202ENST00000489442 SCNN1DP51172 638 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 ZKSCAN2Q63HK3 967 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 ATF7IPQ6VMQ6 1270 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 LDHDQ86WU2 507 aa16.78■□□□□ 0.28
CCL28-202ENST00000489442 HELBQ8NG08 1087 aaPredicted RBP16.78■□□□□ 0.28
CCL28-202ENST00000489442 WTIPA6NIX2 430 aaPredicted RBP16.77■□□□□ 0.28
CCL28-202ENST00000489442 PSMD14O00487 310 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 TAF5LO75529 589 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 POTEIP0CG38 1075 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 POTEJP0CG39 1038 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 RABL6Q3YEC7 729 aaPredicted RBP16.77■□□□□ 0.28
CCL28-202ENST00000489442 CLUAP1Q96AJ1 413 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 GPRC5DQ9NZD1 345 aa16.77■□□□□ 0.28
CCL28-202ENST00000489442 MED23Q9ULK4 1368 aa16.77■□□□□ 0.27
CCL28-202ENST00000489442 H7C1D1 291 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 TRIM27P14373 513 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 APLP1P51693 650 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
CCL28-202ENST00000489442 PODNQ7Z5L7 613 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 ANKRD44Q8N8A2 993 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 KCNQ5Q9NR82 932 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 SCN9AQ15858 1988 aa16.76■□□□□ 0.27
CCL28-202ENST00000489442 ADARB2Q9NS39 739 aaKnown RBP16.75■□□□□ 0.27
CCL28-202ENST00000489442 CNOT7Q9UIV1 285 aaKnown RBP16.75■□□□□ 0.27
CCL28-202ENST00000489442 ZBTB12Q9Y330 459 aaPredicted RBP16.75■□□□□ 0.27
CCL28-202ENST00000489442 GNAI3P08754 354 aa16.74■□□□□ 0.27
CCL28-202ENST00000489442 USP50Q70EL3 339 aaPredicted RBP16.74■□□□□ 0.27
CCL28-202ENST00000489442 FTSJ3Q8IY81 847 aaKnown RBP16.74■□□□□ 0.27
CCL28-202ENST00000489442 FBXW7Q969H0 707 aa16.74■□□□□ 0.27
CCL28-202ENST00000489442 COA1Q9GZY4 146 aa16.74■□□□□ 0.27
CCL28-202ENST00000489442 A0A1B0GUL6 1792 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 USP17L3A6NCW0 530 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 USP17L4A6NCW7 530 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 RPS12P25398 132 aaKnown RBP16.73■□□□□ 0.27
CCL28-202ENST00000489442 USP17L1Q7RTZ2 530 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 MICALL2Q8IY33 904 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 DPF2Q92785 391 aa16.73■□□□□ 0.27
CCL28-202ENST00000489442 MEIS3Q99687 375 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms