RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 CDC5LQ99459 802 aaKnown RBP17.14■□□□□ 0.33
LMO4-203ENST00000489303 GPRC5DQ9NZD1 345 aa17.14■□□□□ 0.33
LMO4-203ENST00000489303 LRRC37AA6NMS7 1700 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 RASSF10A6NK89 507 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 F6X3S4 739 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 HIRAP54198 1017 aaPredicted RBP17.13■□□□□ 0.33
LMO4-203ENST00000489303 DEFB115Q30KQ5 88 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 SLC4A10Q6U841 1118 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 DLK2Q6UY11 383 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 CDCA7LQ96GN5 454 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 EYA3Q99504 573 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 SEC31BQ9NQW1 1179 aa17.13■□□□□ 0.33
LMO4-203ENST00000489303 CACNA1FO60840 1977 aa17.12■□□□□ 0.33
LMO4-203ENST00000489303 C6orf229H3BNL8 230 aa17.12■□□□□ 0.33
LMO4-203ENST00000489303 BEND3Q5T5X7 828 aa17.12■□□□□ 0.33
LMO4-203ENST00000489303 USP50Q70EL3 339 aaPredicted RBP17.12■□□□□ 0.33
LMO4-203ENST00000489303 TTLL11Q8NHH1 800 aa17.12■□□□□ 0.33
LMO4-203ENST00000489303 KCNQ5Q9NR82 932 aa17.12■□□□□ 0.33
LMO4-203ENST00000489303 ABT1Q9ULW3 272 aaKnown RBP17.12■□□□□ 0.33
LMO4-203ENST00000489303 RIMBP2O15034 1052 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 CT47B1P0C2W7 299 aaPredicted RBP17.11■□□□□ 0.33
LMO4-203ENST00000489303 GPSM2P81274 684 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 CIAPIN1Q6FI81 312 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 MRPL50Q8N5N7 158 aaKnown RBP17.11■□□□□ 0.33
LMO4-203ENST00000489303 TRPM4Q8TD43 1214 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 PLA2G12BQ9BX93 195 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 SRCIN1Q9C0H9 1055 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 ANKIB1Q9P2G1 1089 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 POLLQ9UGP5 575 aa17.11■□□□□ 0.33
LMO4-203ENST00000489303 ZBTB12Q9Y330 459 aaPredicted RBP17.11■□□□□ 0.33
LMO4-203ENST00000489303 WDR33Q9C0J8 1336 aaKnown RBP17.11■□□□□ 0.33
LMO4-203ENST00000489303 ALDH1L1O75891 902 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 GRM1Q13255 1194 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 WASHC4Q2M389 1173 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 ALDH1L2Q3SY69 923 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 TRMT2AQ8IZ69 625 aaKnown RBP17.1■□□□□ 0.33
LMO4-203ENST00000489303 GLIS2Q9BZE0 524 aaPredicted RBP17.1■□□□□ 0.33
LMO4-203ENST00000489303 DBNDD1Q9H9R9 158 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 ADARB2Q9NS39 739 aaKnown RBP17.1■□□□□ 0.33
LMO4-203ENST00000489303 WBP1LQ9NX94 342 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 C9orf78Q9NZ63 289 aaPredicted RBP17.1■□□□□ 0.33
LMO4-203ENST00000489303 PTPRCP08575 1304 aa17.1■□□□□ 0.33
LMO4-203ENST00000489303 IGHMBP2P38935 993 aaKnown RBP17.09■□□□□ 0.33
LMO4-203ENST00000489303 DOK7Q18PE1 504 aa17.09■□□□□ 0.33
LMO4-203ENST00000489303 CYP4F22Q6NT55 531 aa17.09■□□□□ 0.33
LMO4-203ENST00000489303 SSH1Q8WYL5 1049 aa17.09■□□□□ 0.33
LMO4-203ENST00000489303 GREM2Q9H772 168 aa17.09■□□□□ 0.33
LMO4-203ENST00000489303 SMC4Q9NTJ3 1288 aa17.09■□□□□ 0.33
LMO4-203ENST00000489303 TRPM7Q96QT4 1865 aa17.08■□□□□ 0.33
LMO4-203ENST00000489303 RTL9Q8NET4 1388 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 G3V3G9 751 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 EGFRP00533 1210 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 LBX1P52954 281 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 TNIP1Q15025 636 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 DCAF8Q5TAQ9 597 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 BCL2L13Q9BXK5 485 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 ZC3H12CQ9C0D7 883 aaKnown RBP17.08■□□□□ 0.32
LMO4-203ENST00000489303 PODXL2Q9NZ53 605 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 GGA1Q9UJY5 639 aa17.08■□□□□ 0.32
LMO4-203ENST00000489303 GRM8O00222 908 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 PSMD14O00487 310 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 UFL1O94874 794 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 CASP7P55210 303 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 PAXIP1Q6ZW49 1069 aaPredicted RBP17.07■□□□□ 0.32
LMO4-203ENST00000489303 SAMD7Q7Z3H4 446 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 TBC1D16Q8TBP0 767 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 MPHOSPH8Q99549 860 aa17.07■□□□□ 0.32
LMO4-203ENST00000489303 BSDC1Q9NW68 430 aaPredicted RBP17.07■□□□□ 0.32
LMO4-203ENST00000489303 CNOT7Q9UIV1 285 aaKnown RBP17.07■□□□□ 0.32
LMO4-203ENST00000489303 XDHP47989 1333 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 ANKRD18BA2A2Z9 1011 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 WTIPA6NIX2 430 aaPredicted RBP17.06■□□□□ 0.32
LMO4-203ENST00000489303 AOC2O75106 756 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 CSF1RP07333 972 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 ITGA6P23229 1130 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 ATP2B4P23634 1241 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 HNRNPUQ00839 825 aaKnown RBP eCLIP17.06■□□□□ 0.32
LMO4-203ENST00000489303 MICALL2Q8IY33 904 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 CAPNS2Q96L46 248 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 PGAP2Q9UHJ9 254 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 CHMP3Q9Y3E7 222 aa17.06■□□□□ 0.32
LMO4-203ENST00000489303 CELF2O95319 508 aaKnown RBP17.05■□□□□ 0.32
LMO4-203ENST00000489303 HSPA8P11142 646 aaKnown RBP17.05■□□□□ 0.32
LMO4-203ENST00000489303 CTCFP49711 727 aaPredicted RBP17.05■□□□□ 0.32
LMO4-203ENST00000489303 IFIT5Q13325 482 aaKnown RBP17.05■□□□□ 0.32
LMO4-203ENST00000489303 FAM161AQ3B820 660 aa17.05■□□□□ 0.32
LMO4-203ENST00000489303 AIDAQ96BJ3 306 aa17.05■□□□□ 0.32
LMO4-203ENST00000489303 TLL2Q9Y6L7 1015 aa17.05■□□□□ 0.32
LMO4-203ENST00000489303 SCN9AQ15858 1988 aa17.04■□□□□ 0.32
LMO4-203ENST00000489303 ECE2O60344 883 aa17.04■□□□□ 0.32
LMO4-203ENST00000489303 ZNF408Q9H9D4 720 aa17.04■□□□□ 0.32
LMO4-203ENST00000489303 PRDM10Q9NQV6 1147 aa17.04■□□□□ 0.32
LMO4-203ENST00000489303 TSKSQ9UJT2 592 aa17.04■□□□□ 0.32
LMO4-203ENST00000489303 THSD7BQ9C0I4 1608 aa17.03■□□□□ 0.32
LMO4-203ENST00000489303 CCDC57Q2TAC2 916 aa17.03■□□□□ 0.32
LMO4-203ENST00000489303 TBC1D10BQ4KMP7 808 aaPredicted RBP17.03■□□□□ 0.32
LMO4-203ENST00000489303 TAF7LQ5H9L4 462 aa17.03■□□□□ 0.32
LMO4-203ENST00000489303 RBM26Q5T8P6 1007 aaKnown RBP17.03■□□□□ 0.32
LMO4-203ENST00000489303 USP48Q86UV5 1035 aa17.03■□□□□ 0.32
LMO4-203ENST00000489303 ANKRD2Q9GZV1 360 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms