RNA–Protein interactions for RNA: ENST00000489003.5

FDPS-213, Transcript of farnesyl diphosphate synthase, humanhuman

TSL 2

Gene FDPS, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-213ENST00000489003 RRP1P56182 461 aaKnown RBP18.97■□□□□ 0.63
FDPS-213ENST00000489003 TAF7LQ5H9L4 462 aa18.97■□□□□ 0.63
FDPS-213ENST00000489003 PODXL2Q9NZ53 605 aa18.97■□□□□ 0.63
FDPS-213ENST00000489003 POLLQ9UGP5 575 aa18.97■□□□□ 0.63
FDPS-213ENST00000489003 DICER1Q9UPY3 1922 aaKnown RBP18.96■□□□□ 0.63
FDPS-213ENST00000489003 IARSP41252 1262 aaKnown RBP18.96■□□□□ 0.63
FDPS-213ENST00000489003 LDHAL6AQ6ZMR3 332 aa18.96■□□□□ 0.63
FDPS-213ENST00000489003 SUPT20HQ8NEM7 779 aa18.96■□□□□ 0.63
FDPS-213ENST00000489003 KLHDC4Q8TBB5 520 aa18.96■□□□□ 0.63
FDPS-213ENST00000489003 TBC1D16Q8TBP0 767 aa18.96■□□□□ 0.63
FDPS-213ENST00000489003 PUS3Q9BZE2 481 aaKnown RBP18.96■□□□□ 0.63
FDPS-213ENST00000489003 ANKIB1Q9P2G1 1089 aa18.96■□□□□ 0.63
FDPS-213ENST00000489003 YY1P25490 414 aa18.95■□□□□ 0.62
FDPS-213ENST00000489003 C1orf115Q9H7X2 142 aa18.95■□□□□ 0.62
FDPS-213ENST00000489003 DDX19BQ9UMR2 479 aa18.95■□□□□ 0.62
FDPS-213ENST00000489003 WTIPA6NIX2 430 aaPredicted RBP18.94■□□□□ 0.62
FDPS-213ENST00000489003 C6orf229H3BNL8 230 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 PTPN12Q05209 780 aaKnown RBP18.94■□□□□ 0.62
FDPS-213ENST00000489003 CHRNDQ07001 517 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 MTX1Q13505 466 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 ANKRD2Q9GZV1 360 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 VPS33BQ9H267 617 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 CNNM1Q9NRU3 951 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 RIPOR2Q9Y4F9 1068 aa18.94■□□□□ 0.62
FDPS-213ENST00000489003 ATP8B2P98198 1209 aa18.93■□□□□ 0.62
FDPS-213ENST00000489003 LRRC24Q50LG9 513 aa18.93■□□□□ 0.62
FDPS-213ENST00000489003 HELBQ8NG08 1087 aaPredicted RBP18.93■□□□□ 0.62
FDPS-213ENST00000489003 ZBTB40Q9NUA8 1239 aa18.93■□□□□ 0.62
FDPS-213ENST00000489003 GGA1Q9UJY5 639 aa18.93■□□□□ 0.62
FDPS-213ENST00000489003 XDHP47989 1333 aa18.93■□□□□ 0.62
FDPS-213ENST00000489003 RIMBP2O15034 1052 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 SRGAP3O43295 1099 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 PPIP5K2O43314 1243 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 TAF5LO75529 589 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 ATP2B4P23634 1241 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 GPR101Q96P66 508 aaPredicted RBP18.92■□□□□ 0.62
FDPS-213ENST00000489003 SUPT16HQ9Y5B9 1047 aaKnown RBP18.92■□□□□ 0.62
FDPS-213ENST00000489003 DUOX1Q9NRD9 1551 aa18.92■□□□□ 0.62
FDPS-213ENST00000489003 LTBP1Q14766 1721 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 PNMA6EA0A0J9YXQ4 647 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 UFL1O94874 794 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 KIAA2012Q0VF49 1180 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 AOC3Q16853 763 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 WASHC4Q2M389 1173 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 LARGE2Q8N3Y3 721 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 COPRSQ9NQ92 184 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 PA2G4Q9UQ80 394 aaKnown RBP18.91■□□□□ 0.62
FDPS-213ENST00000489003 LEMD3Q9Y2U8 911 aa18.91■□□□□ 0.62
FDPS-213ENST00000489003 EYA2O00167 538 aa18.9■□□□□ 0.62
FDPS-213ENST00000489003 EYA3Q99504 573 aa18.9■□□□□ 0.62
FDPS-213ENST00000489003 ZC3H12CQ9C0D7 883 aaKnown RBP18.9■□□□□ 0.62
FDPS-213ENST00000489003 CHMP4BQ9H444 224 aaKnown RBP18.9■□□□□ 0.62
FDPS-213ENST00000489003 SNAP23O00161 211 aa18.89■□□□□ 0.61
FDPS-213ENST00000489003 ATG9AQ7Z3C6 839 aa18.89■□□□□ 0.61
FDPS-213ENST00000489003 JDP2Q8WYK2 163 aa18.89■□□□□ 0.61
FDPS-213ENST00000489003 ZNF804BA4D1E1 1349 aa18.89■□□□□ 0.61
FDPS-213ENST00000489003 COL4A5P29400 1685 aa18.89■□□□□ 0.61
FDPS-213ENST00000489003 FZD9O00144 591 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 POLA2Q14181 598 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 SSH3Q8TE77 659 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 SIL1Q9H173 461 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 FBXO3Q9UK99 471 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 MROH5Q6ZUA9 1318 aa18.88■□□□□ 0.61
FDPS-213ENST00000489003 CIAO1O76071 339 aa18.87■□□□□ 0.61
FDPS-213ENST00000489003 DOK7Q18PE1 504 aa18.87■□□□□ 0.61
FDPS-213ENST00000489003 CEP85Q6P2H3 762 aa18.87■□□□□ 0.61
FDPS-213ENST00000489003 TXNRD3Q86VQ6 643 aa18.87■□□□□ 0.61
FDPS-213ENST00000489003 NIM1KQ8IY84 436 aa18.87■□□□□ 0.61
FDPS-213ENST00000489003 ZC3H4Q9UPT8 1303 aaKnown RBP18.87■□□□□ 0.61
FDPS-213ENST00000489003 A0A1B0GUL6 1792 aa18.86■□□□□ 0.61
FDPS-213ENST00000489003 PDE8BO95263 885 aa18.86■□□□□ 0.61
FDPS-213ENST00000489003 METTL24Q5JXM2 366 aa18.86■□□□□ 0.61
FDPS-213ENST00000489003 RPAP2Q8IXW5 612 aaPredicted RBP18.86■□□□□ 0.61
FDPS-213ENST00000489003 CRBNQ96SW2 442 aa18.86■□□□□ 0.61
FDPS-213ENST00000489003 ZNRF3Q9ULT6 936 aa18.86■□□□□ 0.61
FDPS-213ENST00000489003 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 KLRK1P26718 216 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 IL15P40933 162 aaPredicted RBP18.85■□□□□ 0.61
FDPS-213ENST00000489003 KCNJ4P48050 445 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 UBE4AQ14139 1066 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 VGLL2Q8N8G2 317 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 DBNDD1Q9H9R9 158 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 TIAM2Q8IVF5 1701 aa18.85■□□□□ 0.61
FDPS-213ENST00000489003 IRS2Q9Y4H2 1338 aa18.84■□□□□ 0.61
FDPS-213ENST00000489003 YDJCA8MPS7 323 aa18.84■□□□□ 0.61
FDPS-213ENST00000489003 EIF6P56537 245 aaKnown RBP18.84■□□□□ 0.61
FDPS-213ENST00000489003 DPY19L2Q6NUT2 758 aa18.84■□□□□ 0.61
FDPS-213ENST00000489003 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
FDPS-213ENST00000489003 ZNF784Q8NCA9 323 aaPredicted RBP18.84■□□□□ 0.61
FDPS-213ENST00000489003 MED23Q9ULK4 1368 aa18.83■□□□□ 0.61
FDPS-213ENST00000489003 ZNF541Q9H0D2 1346 aa18.83■□□□□ 0.61
FDPS-213ENST00000489003 DDNO94850 711 aaPredicted RBP18.83■□□□□ 0.6
FDPS-213ENST00000489003 CXCL9Q07325 125 aa18.83■□□□□ 0.6
FDPS-213ENST00000489003 G3BP1Q13283 466 aaKnown RBP eCLIP18.83■□□□□ 0.61e-7■■□□□ 14.2
FDPS-213ENST00000489003 C15orf52Q6ZUT6 534 aaKnown RBP18.83■□□□□ 0.6
FDPS-213ENST00000489003 ZNF526Q8TF50 670 aaPredicted RBP18.83■□□□□ 0.6
FDPS-213ENST00000489003 KCNQ5Q9NR82 932 aa18.83■□□□□ 0.6
FDPS-213ENST00000489003 CEP126Q9P2H0 1117 aa18.83■□□□□ 0.6
FDPS-213ENST00000489003 G3V3G9 751 aa18.82■□□□□ 0.6
FDPS-213ENST00000489003 ECE2O60344 883 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms