RNA–Protein interactions for RNA: ENST00000488934.1

SF3A3-207, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 5

Gene SF3A3, Length 273 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-207ENST00000488934 POLR3AO14802 1390 aaPredicted RBP7.19□□□□□ -1.26
SF3A3-207ENST00000488934 ATAD2Q6PL18 1390 aa7.19□□□□□ -1.26
SF3A3-207ENST00000488934 NWD2Q9ULI1 1742 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 POM121CA8CG34 1229 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 USP17L5A8MUK1 530 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 PIK3CDO00329 1044 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 XPCQ01831 940 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-207ENST00000488934 LCE2CQ5TA81 110 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 RIPOR1Q6ZS17 1223 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 PMFBP1Q8TBY8 1022 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 CCER1Q8TC90 406 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-207ENST00000488934 GAS2L1Q99501 681 aaPredicted RBP7.18□□□□□ -1.26
SF3A3-207ENST00000488934 ETNK1Q9HBU6 452 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 PRR36Q9H6K5 1346 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 PPIP5K1Q6PFW1 1433 aa7.18□□□□□ -1.26
SF3A3-207ENST00000488934 BACH1O14867 736 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 INHAP05111 366 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 ATP1A2P50993 1020 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 GTF2IP78347 998 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 NCOA4Q13772 614 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 NBPF8Q3BBV2 869 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 TRIM22Q8IYM9 498 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 VWA5B2Q8N398 1253 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 ZSCAN1Q8NBB4 408 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 NGLY1Q96IV0 654 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 C8orf37Q96NL8 207 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 HRH3Q9Y5N1 445 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 AFF2P51816 1311 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 AKAP12Q02952 1782 aa7.17□□□□□ -1.26
SF3A3-207ENST00000488934 CDK12Q9NYV4 1490 aaPredicted RBP7.17□□□□□ -1.26
SF3A3-207ENST00000488934 PLCH1Q4KWH8 1693 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 CRYBG1Q9Y4K1 1723 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 A0A1B0GTH6 734 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 ATP9BO43861 1147 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 ADAMTS2O95450 1211 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 PLEKHM2Q8IWE5 1019 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 RHBDD1Q8TEB9 315 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 GLMNQ92990 594 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 FHDC1Q9C0D6 1143 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-207ENST00000488934 RGS17Q9UGC6 210 aaPredicted RBP7.16□□□□□ -1.26
SF3A3-207ENST00000488934 RBM19Q9Y4C8 960 aaKnown RBP7.16□□□□□ -1.26
SF3A3-207ENST00000488934 NINLQ9Y2I6 1382 aa7.16□□□□□ -1.26
SF3A3-207ENST00000488934 PHRF1Q9P1Y6 1649 aaKnown RBP7.16□□□□□ -1.26
SF3A3-207ENST00000488934 COL14A1Q05707 1796 aaKnown RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 F11P03951 625 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 CSB-PGBD3P0DP91 1061 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 PGBD3Q8N328 593 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 FNBP4Q8N3X1 1017 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 CALR3Q96L12 384 aaKnown RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 TRERF1Q96PN7 1200 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 PUS7Q96PZ0 661 aaKnown RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 COL25A1Q9BXS0 654 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 USP21Q9UK80 565 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 TRPC5Q9UL62 973 aaPredicted RBP7.15□□□□□ -1.26
SF3A3-207ENST00000488934 ACEP12821 1306 aa7.15□□□□□ -1.26
SF3A3-207ENST00000488934 MON2Q7Z3U7 1717 aa7.15□□□□□ -1.27
SF3A3-207ENST00000488934 USP17L3A6NCW0 530 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 USP17L4A6NCW7 530 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 RXRBP28702 533 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 USP6P35125 1406 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 SCNN1DP51172 638 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 SMTNP53814 917 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 CDCA8Q53HL2 280 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 USP17L2Q6R6M4 530 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 POTEAQ6S8J7 498 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 USP17L1Q7RTZ2 530 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 ADAMTS19Q8TE59 1207 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 USP47Q96K76 1375 aa7.14□□□□□ -1.27
SF3A3-207ENST00000488934 NIFKQ9BYG3 293 aaKnown RBP7.14□□□□□ -1.27
SF3A3-207ENST00000488934 NRKQ7Z2Y5 1582 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 SLIT2O94813 1529 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 PHKA2P46019 1235 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 RBM6P78332 1123 aaKnown RBP7.13□□□□□ -1.27
SF3A3-207ENST00000488934 LBRQ14739 615 aaKnown RBP7.13□□□□□ -1.27
SF3A3-207ENST00000488934 TBC1D9Q6ZT07 1266 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 NLRP13Q86W25 1043 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 DEPDC4Q8N2C3 294 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 ABTB2Q8N961 1025 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 ZNF837Q96EG3 531 aaPredicted RBP7.13□□□□□ -1.27
SF3A3-207ENST00000488934 CNTNAP3BQ96NU0 1288 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 CNTNAP3Q9BZ76 1288 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 NUCKS1Q9H1E3 243 aaKnown RBP7.13□□□□□ -1.27
SF3A3-207ENST00000488934 SERTAD1Q9UHV2 236 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 PCDHGA11Q9Y5H2 935 aa7.13□□□□□ -1.27
SF3A3-207ENST00000488934 TTC21AQ8NDW8 1320 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 TMF1P82094 1093 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 C4orf17Q53FE4 359 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 HDGFL2Q7Z4V5 671 aaPredicted RBP7.12□□□□□ -1.27
SF3A3-207ENST00000488934 GPR161Q8N6U8 529 aaKnown RBP7.12□□□□□ -1.27
SF3A3-207ENST00000488934 C1orf216Q8TAB5 229 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 SLC4A9Q96Q91 983 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 QTRT2Q9H974 415 aaKnown RBP7.12□□□□□ -1.27
SF3A3-207ENST00000488934 CABP1Q9NZU7 370 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 NSFL1CQ9UNZ2 370 aaKnown RBP7.12□□□□□ -1.27
SF3A3-207ENST00000488934 NRAPQ86VF7 1730 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 PIK3C2AO00443 1686 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 USP54Q70EL1 1684 aa7.12□□□□□ -1.27
SF3A3-207ENST00000488934 BCL9LQ86UU0 1499 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 ATRNO75882 1429 aa7.11□□□□□ -1.27
SF3A3-207ENST00000488934 CPSF1Q10570 1443 aaKnown RBP7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 82 ms