RNA–Protein interactions for RNA: ENST00000488864.5

CHD1L-208, Transcript of chromodomain helicase DNA binding protein 1 like, humanhuman

TSL 2

Gene CHD1L, Length 2,415 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1L-208ENST00000488864 G3BP1Q13283 466 aaKnown RBP eCLIP16.12■□□□□ 0.172e-7■□□□□ 8.3
CHD1L-208ENST00000488864 PRR5LQ6MZQ0 368 aa16.12■□□□□ 0.17
CHD1L-208ENST00000488864 OTUD7AQ8TE49 926 aaPredicted RBP16.12■□□□□ 0.17
CHD1L-208ENST00000488864 TAF7LQ5H9L4 462 aa16.11■□□□□ 0.17
CHD1L-208ENST00000488864 RHPN1Q8TCX5 695 aa16.11■□□□□ 0.17
CHD1L-208ENST00000488864 PUS3Q9BZE2 481 aaKnown RBP16.11■□□□□ 0.17
CHD1L-208ENST00000488864 COPRSQ9NQ92 184 aa16.11■□□□□ 0.17
CHD1L-208ENST00000488864 LRRC24Q50LG9 513 aa16.11■□□□□ 0.17
CHD1L-208ENST00000488864 COL24A1Q17RW2 1714 aa16.1■□□□□ 0.17
CHD1L-208ENST00000488864 SASH1O94885 1247 aa16.1■□□□□ 0.17
CHD1L-208ENST00000488864 PPP1R9BQ96SB3 815 aa16.1■□□□□ 0.17
CHD1L-208ENST00000488864 DDX60Q8IY21 1712 aaKnown RBP16.1■□□□□ 0.17
CHD1L-208ENST00000488864 ANKRD18BA2A2Z9 1011 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 PTMSP20962 102 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 NASPP49321 788 aaPredicted RBP16.09■□□□□ 0.17
CHD1L-208ENST00000488864 CCDC152Q4G0S7 254 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 KIF1BPQ96EK5 621 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 NLRP3Q96P20 1036 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 MYH3P11055 1940 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 RAB11FIP3O75154 756 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 HSP90B1P14625 803 aaKnown RBP16.09■□□□□ 0.17
CHD1L-208ENST00000488864 CCDC173Q0VFZ6 552 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 SLC10A5Q5PT55 438 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 AK9Q5TCS8 1911 aa16.09■□□□□ 0.17
CHD1L-208ENST00000488864 BAG4O95429 457 aaKnown RBP16.08■□□□□ 0.17
CHD1L-208ENST00000488864 R3HDM1Q15032 1099 aaKnown RBP16.08■□□□□ 0.17
CHD1L-208ENST00000488864 TPM2P07951 284 aa16.08■□□□□ 0.16
CHD1L-208ENST00000488864 TSHZ3Q63HK5 1081 aa16.08■□□□□ 0.16
CHD1L-208ENST00000488864 LDHAL6AQ6ZMR3 332 aa16.08■□□□□ 0.16
CHD1L-208ENST00000488864 ST5P78524 1137 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 TFCP2Q12800 502 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 CLEC17AQ6ZS10 378 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 ATG9AQ7Z3C6 839 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 PARP3Q9Y6F1 533 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 DDX49Q9Y6V7 483 aaKnown RBP16.07■□□□□ 0.16
CHD1L-208ENST00000488864 EYA2O00167 538 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 KIAA1211Q6ZU35 1233 aa16.07■□□□□ 0.16
CHD1L-208ENST00000488864 PSDA5PKW4 1024 aaPredicted RBP16.06■□□□□ 0.16
CHD1L-208ENST00000488864 ZBTB7AO95365 584 aa16.06■□□□□ 0.16
CHD1L-208ENST00000488864 SF3B3Q15393 1217 aaKnown RBP16.06■□□□□ 0.16
CHD1L-208ENST00000488864 KLHL40Q2TBA0 621 aa16.06■□□□□ 0.16
CHD1L-208ENST00000488864 ZSCAN30Q86W11 494 aa16.06■□□□□ 0.16
CHD1L-208ENST00000488864 ERC1Q8IUD2 1116 aa16.06■□□□□ 0.16
CHD1L-208ENST00000488864 CNNM1Q9NRU3 951 aa16.06■□□□□ 0.16
CHD1L-208ENST00000488864 PLEKHM2Q8IWE5 1019 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 CLASRPQ8N2M8 674 aaKnown RBP16.05■□□□□ 0.16
CHD1L-208ENST00000488864 CELF1Q92879 486 aaKnown RBP16.05■□□□□ 0.16
CHD1L-208ENST00000488864 TAF1P21675 1872 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 COL4A1P02462 1669 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 GOLGA6L22H0YM25 854 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 AACSQ86V21 672 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 MPHOSPH8Q99549 860 aa16.05■□□□□ 0.16
CHD1L-208ENST00000488864 CCDC8Q9H0W5 538 aaPredicted RBP16.05■□□□□ 0.16
CHD1L-208ENST00000488864 TNRC6CQ9HCJ0 1690 aaKnown RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 HELBQ8NG08 1087 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 EAF2Q96CJ1 260 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 GSPT1P15170 499 aaKnown RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 IL15P40933 162 aaPredicted RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 MCTP1Q6DN14 999 aa16.04■□□□□ 0.16
CHD1L-208ENST00000488864 TLR7Q9NYK1 1049 aaKnown RBP16.04■□□□□ 0.16
CHD1L-208ENST00000488864 UTRNP46939 3433 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 LAMB2P55268 1798 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 CDC45O75419 566 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 SLC51AQ86UW1 340 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 ATF5Q9Y2D1 282 aaPredicted RBP16.03■□□□□ 0.16
CHD1L-208ENST00000488864 RIPOR2Q9Y4F9 1068 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 IGHMBP2P38935 993 aaKnown RBP16.03■□□□□ 0.16
CHD1L-208ENST00000488864 METTL24Q5JXM2 366 aa16.03■□□□□ 0.16
CHD1L-208ENST00000488864 CDC5LQ99459 802 aaKnown RBP16.03■□□□□ 0.16
CHD1L-208ENST00000488864 OFD1O75665 1012 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 CIAO1O76071 339 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 NCLP19338 710 aaKnown RBP16.02■□□□□ 0.16
CHD1L-208ENST00000488864 TIMM10P62072 90 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 PKP1Q13835 747 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 DDX46Q7L014 1031 aaKnown RBP16.02■□□□□ 0.16
CHD1L-208ENST00000488864 ANKRD18AQ8IVF6 992 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 CEP126Q9P2H0 1117 aa16.02■□□□□ 0.16
CHD1L-208ENST00000488864 SNAP23O00161 211 aa16.02■□□□□ 0.15
CHD1L-208ENST00000488864 IFIT2P09913 472 aaKnown RBP16.02■□□□□ 0.15
CHD1L-208ENST00000488864 MX1P20591 662 aa16.02■□□□□ 0.15
CHD1L-208ENST00000488864 PDE1AP54750 535 aa16.02■□□□□ 0.15
CHD1L-208ENST00000488864 TNNI3KQ59H18 835 aa16.02■□□□□ 0.15
CHD1L-208ENST00000488864 CAVIN1Q6NZI2 390 aaKnown RBP16.02■□□□□ 0.15
CHD1L-208ENST00000488864 RPGRQ92834 1020 aaKnown RBP16.02■□□□□ 0.15
CHD1L-208ENST00000488864 FPGT-TNNI3KV9GXZ4 949 aa16.02■□□□□ 0.15
CHD1L-208ENST00000488864 QSER1Q2KHR3 1735 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 RTL9Q8NET4 1388 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 TAF5LO75529 589 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 ZNF445P59923 1031 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 NEUROD6Q96NK8 337 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 CASZ1Q86V15 1759 aa16.01■□□□□ 0.15
CHD1L-208ENST00000488864 RPS8P62241 208 aaKnown RBP16■□□□□ 0.15
CHD1L-208ENST00000488864 ANP32BQ92688 251 aaKnown RBP16■□□□□ 0.15
CHD1L-208ENST00000488864 RBSNQ9H1K0 784 aa16■□□□□ 0.15
CHD1L-208ENST00000488864 LMBRD1Q9NUN5 540 aa16■□□□□ 0.15
CHD1L-208ENST00000488864 ZSCAN23Q3MJ62 389 aa16■□□□□ 0.15
CHD1L-208ENST00000488864 SLC16A10Q8TF71 515 aa16■□□□□ 0.15
CHD1L-208ENST00000488864 BRIP1Q9BX63 1249 aa16■□□□□ 0.15
CHD1L-208ENST00000488864 SALL3Q9BXA9 1300 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms