RNA–Protein interactions for RNA: ENST00000488349.1

SCRN3-209, Transcript of secernin 3, humanhuman

TSL 4

Gene SCRN3, Length 568 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCRN3-209ENST00000488349 C6orf229H3BNL8 230 aa28.3■■■□□ 2.12
SCRN3-209ENST00000488349 BRPF1P55201 1214 aaPredicted RBP28.3■■■□□ 2.12
SCRN3-209ENST00000488349 WASHC4Q2M389 1173 aa28.3■■■□□ 2.12
SCRN3-209ENST00000488349 SCNN1DP51172 638 aa28.29■■■□□ 2.12
SCRN3-209ENST00000488349 HACL1Q9UJ83 578 aa28.29■■■□□ 2.12
SCRN3-209ENST00000488349 MINPP1Q9UNW1 487 aa28.29■■■□□ 2.12
SCRN3-209ENST00000488349 SCN9AQ15858 1988 aa28.29■■■□□ 2.12
SCRN3-209ENST00000488349 XDHP47989 1333 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 RIMBP2O15034 1052 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 UFL1O94874 794 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 RARSP54136 660 aaKnown RBP28.28■■■□□ 2.12
SCRN3-209ENST00000488349 KAZALD1Q96I82 304 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 C9orf78Q9NZ63 289 aaPredicted RBP28.28■■■□□ 2.12
SCRN3-209ENST00000488349 ANKIB1Q9P2G1 1089 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 GGA1Q9UJY5 639 aa28.28■■■□□ 2.12
SCRN3-209ENST00000488349 NBPF7P0C2Y1 421 aaPredicted RBP28.27■■■□□ 2.12
SCRN3-209ENST00000488349 SUCLG2Q96I99 432 aa28.27■■■□□ 2.12
SCRN3-209ENST00000488349 EYA3Q99504 573 aa28.27■■■□□ 2.12
SCRN3-209ENST00000488349 WTIPA6NIX2 430 aaPredicted RBP28.26■■■□□ 2.11
SCRN3-209ENST00000488349 EPHX2P34913 555 aa28.26■■■□□ 2.11
SCRN3-209ENST00000488349 DBNDD1Q9H9R9 158 aa28.26■■■□□ 2.11
SCRN3-209ENST00000488349 RAD17O75943 681 aa28.25■■■□□ 2.11
SCRN3-209ENST00000488349 LMBR1LQ6UX01 489 aa28.25■■■□□ 2.11
SCRN3-209ENST00000488349 IGHMBP2P38935 993 aaKnown RBP28.24■■■□□ 2.11
SCRN3-209ENST00000488349 CIAPIN1Q6FI81 312 aa28.24■■■□□ 2.11
SCRN3-209ENST00000488349 NOB1Q9ULX3 412 aaKnown RBP28.24■■■□□ 2.11
SCRN3-209ENST00000488349 PSME4Q14997 1843 aa28.24■■■□□ 2.11
SCRN3-209ENST00000488349 ECE2O60344 883 aa28.23■■■□□ 2.11
SCRN3-209ENST00000488349 ATP2B4P23634 1241 aa28.23■■■□□ 2.11
SCRN3-209ENST00000488349 EPS15P42566 896 aa28.23■■■□□ 2.11
SCRN3-209ENST00000488349 DOK7Q18PE1 504 aa28.23■■■□□ 2.11
SCRN3-209ENST00000488349 CHADLQ6NUI6 762 aa28.23■■■□□ 2.11
SCRN3-209ENST00000488349 ANKRD18BA2A2Z9 1011 aa28.22■■■□□ 2.11
SCRN3-209ENST00000488349 LDHDQ86WU2 507 aa28.22■■■□□ 2.11
SCRN3-209ENST00000488349 GMPSP49915 693 aaPredicted RBP28.21■■■□□ 2.11
SCRN3-209ENST00000488349 ZC3H12CQ9C0D7 883 aaKnown RBP28.21■■■□□ 2.11
SCRN3-209ENST00000488349 USP44Q9H0E7 712 aa28.21■■■□□ 2.11
SCRN3-209ENST00000488349 KCNQ5Q9NR82 932 aa28.21■■■□□ 2.11
SCRN3-209ENST00000488349 ZBED9Q6R2W3 1325 aa28.2■■■□□ 2.11
SCRN3-209ENST00000488349 ZNF646O15015 1829 aaPredicted RBP28.2■■■□□ 2.11
SCRN3-209ENST00000488349 CCT4P50991 539 aaKnown RBP28.2■■■□□ 2.1
SCRN3-209ENST00000488349 APLP1P51693 650 aa28.2■■■□□ 2.1
SCRN3-209ENST00000488349 IFIT5Q13325 482 aaKnown RBP28.2■■■□□ 2.1
SCRN3-209ENST00000488349 GPRC5DQ9NZD1 345 aa28.2■■■□□ 2.1
SCRN3-209ENST00000488349 CHMP3Q9Y3E7 222 aa28.2■■■□□ 2.1
SCRN3-209ENST00000488349 PSMD14O00487 310 aa28.19■■■□□ 2.1
SCRN3-209ENST00000488349 LMOD1P29536 600 aaPredicted RBP28.19■■■□□ 2.1
SCRN3-209ENST00000488349 TNIP1Q15025 636 aa28.19■■■□□ 2.1
SCRN3-209ENST00000488349 EAPPQ56P03 285 aaPredicted RBP28.19■■■□□ 2.1
SCRN3-209ENST00000488349 MPHOSPH8Q99549 860 aa28.19■■■□□ 2.1
SCRN3-209ENST00000488349 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
SCRN3-209ENST00000488349 RABL6Q3YEC7 729 aaPredicted RBP28.18■■■□□ 2.1
SCRN3-209ENST00000488349 PNMA8AQ86V59 439 aaPredicted RBP28.18■■■□□ 2.1
SCRN3-209ENST00000488349 ANKRD44Q8N8A2 993 aa28.18■■■□□ 2.1
SCRN3-209ENST00000488349 ZNF594Q96JF6 807 aaPredicted RBP28.18■■■□□ 2.1
SCRN3-209ENST00000488349 BICC1Q9H694 974 aaKnown RBP28.18■■■□□ 2.1
SCRN3-209ENST00000488349 CHRNDQ07001 517 aa28.17■■■□□ 2.1
SCRN3-209ENST00000488349 HTRA3P83110 453 aa28.16■■■□□ 2.1
SCRN3-209ENST00000488349 API5Q9BZZ5 524 aaKnown RBP28.16■■■□□ 2.1
SCRN3-209ENST00000488349 LEMD3Q9Y2U8 911 aa28.16■■■□□ 2.1
SCRN3-209ENST00000488349 KIF16BQ96L93 1317 aa28.16■■■□□ 2.1
SCRN3-209ENST00000488349 SHTN1A0MZ66 631 aa28.15■■■□□ 2.1
SCRN3-209ENST00000488349 CCDC57Q2TAC2 916 aa28.15■■■□□ 2.1
SCRN3-209ENST00000488349 TXNRD3Q86VQ6 643 aa28.15■■■□□ 2.1
SCRN3-209ENST00000488349 ANKRD2Q9GZV1 360 aa28.15■■■□□ 2.1
SCRN3-209ENST00000488349 ZBTB12Q9Y330 459 aaPredicted RBP28.15■■■□□ 2.1
SCRN3-209ENST00000488349 BCAR3O75815 825 aa28.14■■■□□ 2.1
SCRN3-209ENST00000488349 KLRK1P26718 216 aa28.14■■■□□ 2.1
SCRN3-209ENST00000488349 ARHGAP45Q92619 1136 aa28.14■■■□□ 2.1
SCRN3-209ENST00000488349 IRS2Q9Y4H2 1338 aa28.14■■■□□ 2.09
SCRN3-209ENST00000488349 ITGBL1O95965 494 aaPredicted RBP28.13■■■□□ 2.09
SCRN3-209ENST00000488349 USP50Q70EL3 339 aaPredicted RBP28.13■■■□□ 2.09
SCRN3-209ENST00000488349 ADARB2Q9NS39 739 aaKnown RBP28.13■■■□□ 2.09
SCRN3-209ENST00000488349 ZNF804BA4D1E1 1349 aa28.13■■■□□ 2.09
SCRN3-209ENST00000488349 PASKQ96RG2 1323 aa28.13■■■□□ 2.09
SCRN3-209ENST00000488349 ZNF609O15014 1411 aa28.12■■■□□ 2.09
SCRN3-209ENST00000488349 SNAP23O00161 211 aa28.12■■■□□ 2.09
SCRN3-209ENST00000488349 VIL1P09327 827 aaKnown RBP28.12■■■□□ 2.09
SCRN3-209ENST00000488349 DNAJC5GQ8N7S2 189 aa28.12■■■□□ 2.09
SCRN3-209ENST00000488349 TAF5LO75529 589 aa28.11■■■□□ 2.09
SCRN3-209ENST00000488349 MAP1SQ66K74 1059 aaPredicted RBP28.11■■■□□ 2.09
SCRN3-209ENST00000488349 HELBQ8NG08 1087 aaPredicted RBP28.11■■■□□ 2.09
SCRN3-209ENST00000488349 DPF2Q92785 391 aa28.11■■■□□ 2.09
SCRN3-209ENST00000488349 TNNQ9UQP3 1299 aa28.11■■■□□ 2.09
SCRN3-209ENST00000488349 CLEC11AQ9Y240 323 aa28.11■■■□□ 2.09
SCRN3-209ENST00000488349 LDHAL6AQ6ZMR3 332 aa28.1■■■□□ 2.09
SCRN3-209ENST00000488349 TRPM4Q8TD43 1214 aa28.1■■■□□ 2.09
SCRN3-209ENST00000488349 CNOT7Q9UIV1 285 aaKnown RBP28.1■■■□□ 2.09
SCRN3-209ENST00000488349 G3V3G9 751 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 TRIM27P14373 513 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 RPS12P25398 132 aaKnown RBP28.09■■■□□ 2.09
SCRN3-209ENST00000488349 HIRAP54198 1017 aaPredicted RBP28.09■■■□□ 2.09
SCRN3-209ENST00000488349 TAF7LQ5H9L4 462 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 DCAF8Q5TAQ9 597 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 PODNQ7Z5L7 613 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 MICALL2Q8IY33 904 aa28.09■■■□□ 2.09
SCRN3-209ENST00000488349 PUS3Q9BZE2 481 aaKnown RBP28.09■■■□□ 2.09
SCRN3-209ENST00000488349 INTS3Q68E01 1043 aaKnown RBP28.08■■■□□ 2.09
SCRN3-209ENST00000488349 C15orf52Q6ZUT6 534 aaKnown RBP28.07■■■□□ 2.08
SCRN3-209ENST00000488349 CNTROBQ8N137 903 aa28.07■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms