RNA–Protein interactions for RNA: ENST00000488058.1

RNF38-208, Transcript of ring finger protein 38, humanhuman

TSL 3

Gene RNF38, Length 582 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-208ENST00000488058 PODXL2Q9NZ53 605 aa30.07■■■□□ 2.4
RNF38-208ENST00000488058 C9orf78Q9NZ63 289 aaPredicted RBP30.07■■■□□ 2.4
RNF38-208ENST00000488058 ITGA6P23229 1130 aa30.06■■■□□ 2.4
RNF38-208ENST00000488058 SCNN1DP51172 638 aa30.06■■■□□ 2.4
RNF38-208ENST00000488058 HTRA3P83110 453 aa30.06■■■□□ 2.4
RNF38-208ENST00000488058 CHMP3Q9Y3E7 222 aa30.06■■■□□ 2.4
RNF38-208ENST00000488058 GRM8O00222 908 aa30.05■■■□□ 2.4
RNF38-208ENST00000488058 ALDH1L1O75891 902 aa30.05■■■□□ 2.4
RNF38-208ENST00000488058 IGHMBP2P38935 993 aaKnown RBP30.05■■■□□ 2.4
RNF38-208ENST00000488058 DOK7Q18PE1 504 aa30.05■■■□□ 2.4
RNF38-208ENST00000488058 PNMA8AQ86V59 439 aaPredicted RBP30.05■■■□□ 2.4
RNF38-208ENST00000488058 ZC3H12CQ9C0D7 883 aaKnown RBP30.05■■■□□ 2.4
RNF38-208ENST00000488058 SMC4Q9NTJ3 1288 aa30.05■■■□□ 2.4
RNF38-208ENST00000488058 PTPRCP08575 1304 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 XDHP47989 1333 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 YDJCA8MPS7 323 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 G3V3G9 751 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 EPS15P42566 896 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 TNIP1Q15025 636 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 DCAF8Q5TAQ9 597 aa30.04■■■□□ 2.4
RNF38-208ENST00000488058 CSF1RP07333 972 aa30.03■■■□□ 2.4
RNF38-208ENST00000488058 ALDH1L2Q3SY69 923 aa30.03■■■□□ 2.4
RNF38-208ENST00000488058 BSDC1Q9NW68 430 aaPredicted RBP30.03■■■□□ 2.4
RNF38-208ENST00000488058 ECE2O60344 883 aa30.02■■■□□ 2.4
RNF38-208ENST00000488058 GMPSP49915 693 aaPredicted RBP30.02■■■□□ 2.4
RNF38-208ENST00000488058 ANKRD18BA2A2Z9 1011 aa30.01■■■□□ 2.39
RNF38-208ENST00000488058 ATP2B4P23634 1241 aa30.01■■■□□ 2.39
RNF38-208ENST00000488058 FOXO4P98177 505 aa30.01■■■□□ 2.39
RNF38-208ENST00000488058 MPHOSPH8Q99549 860 aa30.01■■■□□ 2.39
RNF38-208ENST00000488058 MINPP1Q9UNW1 487 aa30.01■■■□□ 2.39
RNF38-208ENST00000488058 GPRC5DQ9NZD1 345 aa30■■■□□ 2.39
RNF38-208ENST00000488058 ADAMTSL1Q8N6G6 1762 aa30■■■□□ 2.39
RNF38-208ENST00000488058 HNRNPUQ00839 825 aaKnown RBP eCLIP29.99■■■□□ 2.39
RNF38-208ENST00000488058 CT47B1P0C2W7 299 aaPredicted RBP29.98■■■□□ 2.39
RNF38-208ENST00000488058 IFIT5Q13325 482 aaKnown RBP29.98■■■□□ 2.39
RNF38-208ENST00000488058 EPHA10Q5JZY3 1008 aa29.98■■■□□ 2.39
RNF38-208ENST00000488058 LMBR1LQ6UX01 489 aa29.98■■■□□ 2.39
RNF38-208ENST00000488058 PSMD14O00487 310 aa29.96■■■□□ 2.39
RNF38-208ENST00000488058 MAP1SQ66K74 1059 aaPredicted RBP29.96■■■□□ 2.39
RNF38-208ENST00000488058 KCNQ5Q9NR82 932 aa29.96■■■□□ 2.39
RNF38-208ENST00000488058 ZBTB12Q9Y330 459 aaPredicted RBP29.96■■■□□ 2.39
RNF38-208ENST00000488058 CCT4P50991 539 aaKnown RBP29.95■■■□□ 2.39
RNF38-208ENST00000488058 SUCLG2Q96I99 432 aa29.95■■■□□ 2.39
RNF38-208ENST00000488058 ADARB2Q9NS39 739 aaKnown RBP29.95■■■□□ 2.39
RNF38-208ENST00000488058 WTIPA6NIX2 430 aaPredicted RBP29.94■■■□□ 2.38
RNF38-208ENST00000488058 NBPF7P0C2Y1 421 aaPredicted RBP29.94■■■□□ 2.38
RNF38-208ENST00000488058 TAF7LQ5H9L4 462 aa29.94■■■□□ 2.38
RNF38-208ENST00000488058 USP50Q70EL3 339 aaPredicted RBP29.94■■■□□ 2.38
RNF38-208ENST00000488058 CCDC57Q2TAC2 916 aa29.93■■■□□ 2.38
RNF38-208ENST00000488058 ANKRD2Q9GZV1 360 aa29.93■■■□□ 2.38
RNF38-208ENST00000488058 SCN9AQ15858 1988 aa29.93■■■□□ 2.38
RNF38-208ENST00000488058 CNTROBQ8N137 903 aa29.92■■■□□ 2.38
RNF38-208ENST00000488058 DNAJC5GQ8N7S2 189 aa29.92■■■□□ 2.38
RNF38-208ENST00000488058 CNOT7Q9UIV1 285 aaKnown RBP29.92■■■□□ 2.38
RNF38-208ENST00000488058 NOB1Q9ULX3 412 aaKnown RBP29.92■■■□□ 2.38
RNF38-208ENST00000488058 MED23Q9ULK4 1368 aa29.91■■■□□ 2.38
RNF38-208ENST00000488058 SHTN1A0MZ66 631 aa29.91■■■□□ 2.38
RNF38-208ENST00000488058 CHRNDQ07001 517 aa29.91■■■□□ 2.38
RNF38-208ENST00000488058 ZNF594Q96JF6 807 aaPredicted RBP29.91■■■□□ 2.38
RNF38-208ENST00000488058 H7C1D1 291 aa29.9■■■□□ 2.38
RNF38-208ENST00000488058 ITGBL1O95965 494 aaPredicted RBP29.9■■■□□ 2.38
RNF38-208ENST00000488058 KCNJ4P48050 445 aa29.9■■■□□ 2.38
RNF38-208ENST00000488058 MICALL2Q8IY33 904 aa29.9■■■□□ 2.38
RNF38-208ENST00000488058 LEMD3Q9Y2U8 911 aa29.9■■■□□ 2.38
RNF38-208ENST00000488058 PASKQ96RG2 1323 aa29.9■■■□□ 2.38
RNF38-208ENST00000488058 ZNF804BA4D1E1 1349 aa29.89■■■□□ 2.38
RNF38-208ENST00000488058 UTYO14607 1347 aa29.89■■■□□ 2.38
RNF38-208ENST00000488058 RARSP54136 660 aaKnown RBP29.88■■■□□ 2.37
RNF38-208ENST00000488058 HELBQ8NG08 1087 aaPredicted RBP29.88■■■□□ 2.37
RNF38-208ENST00000488058 KLRG1Q96E93 195 aa29.88■■■□□ 2.37
RNF38-208ENST00000488058 KAZALD1Q96I82 304 aa29.88■■■□□ 2.37
RNF38-208ENST00000488058 A0A1B0GUL6 1792 aa29.87■■■□□ 2.37
RNF38-208ENST00000488058 TRPM4Q8TD43 1214 aa29.87■■■□□ 2.37
RNF38-208ENST00000488058 DPF2Q92785 391 aa29.87■■■□□ 2.37
RNF38-208ENST00000488058 BICC1Q9H694 974 aaKnown RBP29.87■■■□□ 2.37
RNF38-208ENST00000488058 CNNM1Q9NRU3 951 aa29.87■■■□□ 2.37
RNF38-208ENST00000488058 CEP350Q5VT06 3117 aa29.87■■■□□ 2.37
RNF38-208ENST00000488058 TAF5LO75529 589 aa29.86■■■□□ 2.37
RNF38-208ENST00000488058 RPS12P25398 132 aaKnown RBP29.86■■■□□ 2.37
RNF38-208ENST00000488058 LDHAL6AQ6ZMR3 332 aa29.86■■■□□ 2.37
RNF38-208ENST00000488058 API5Q9BZZ5 524 aaKnown RBP29.86■■■□□ 2.37
RNF38-208ENST00000488058 PSME4Q14997 1843 aa29.86■■■□□ 2.37
RNF38-208ENST00000488058 VIL1P09327 827 aaKnown RBP29.85■■■□□ 2.37
RNF38-208ENST00000488058 KLRK1P26718 216 aa29.85■■■□□ 2.37
RNF38-208ENST00000488058 PODNQ7Z5L7 613 aa29.85■■■□□ 2.37
RNF38-208ENST00000488058 TXNRD3Q86VQ6 643 aa29.85■■■□□ 2.37
RNF38-208ENST00000488058 FBXW7Q969H0 707 aa29.85■■■□□ 2.37
RNF38-208ENST00000488058 CREBZFQ9NS37 354 aa29.85■■■□□ 2.37
RNF38-208ENST00000488058 PLIN1O60240 522 aa29.84■■■□□ 2.37
RNF38-208ENST00000488058 SAMD7Q7Z3H4 446 aa29.84■■■□□ 2.37
RNF38-208ENST00000488058 USP44Q9H0E7 712 aa29.84■■■□□ 2.37
RNF38-208ENST00000488058 BRPF1P55201 1214 aaPredicted RBP29.83■■■□□ 2.37
RNF38-208ENST00000488058 TBC1D10BQ4KMP7 808 aaPredicted RBP29.83■■■□□ 2.37
RNF38-208ENST00000488058 RBM26Q5T8P6 1007 aaKnown RBP29.83■■■□□ 2.37
RNF38-208ENST00000488058 KIF16BQ96L93 1317 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 USP17L3A6NCW0 530 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 USP17L4A6NCW7 530 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 SNAP23O00161 211 aa29.82■■■□□ 2.36
RNF38-208ENST00000488058 HIRAP54198 1017 aaPredicted RBP29.82■■■□□ 2.36
RNF38-208ENST00000488058 RSBN1LQ6PCB5 846 aaPredicted RBP29.82■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms