RNA–Protein interactions for RNA: ENST00000487894.5

HMG20B-212, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 1,242 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-212ENST00000487894 GPC2Q8N158 579 aa21.53■■□□□ 1.04
HMG20B-212ENST00000487894 RBM46Q8TBY0 533 aaKnown RBP21.53■■□□□ 1.04
HMG20B-212ENST00000487894 KAZALD1Q96I82 304 aa21.53■■□□□ 1.04
HMG20B-212ENST00000487894 GPR101Q96P66 508 aaPredicted RBP21.53■■□□□ 1.04
HMG20B-212ENST00000487894 XDHP47989 1333 aa21.53■■□□□ 1.04
HMG20B-212ENST00000487894 UFL1O94874 794 aa21.52■■□□□ 1.04
HMG20B-212ENST00000487894 IGHMBP2P38935 993 aaKnown RBP21.52■■□□□ 1.04
HMG20B-212ENST00000487894 WASHC4Q2M389 1173 aa21.52■■□□□ 1.04
HMG20B-212ENST00000487894 LMBR1LQ6UX01 489 aa21.52■■□□□ 1.04
HMG20B-212ENST00000487894 API5Q9BZZ5 524 aaKnown RBP21.52■■□□□ 1.04
HMG20B-212ENST00000487894 ANKIB1Q9P2G1 1089 aa21.52■■□□□ 1.04
HMG20B-212ENST00000487894 ZNRF3Q9ULT6 936 aa21.52■■□□□ 1.04
HMG20B-212ENST00000487894 ANKRD18BA2A2Z9 1011 aa21.51■■□□□ 1.03
HMG20B-212ENST00000487894 EYA3Q99504 573 aa21.51■■□□□ 1.03
HMG20B-212ENST00000487894 GGA1Q9UJY5 639 aa21.51■■□□□ 1.03
HMG20B-212ENST00000487894 MINPP1Q9UNW1 487 aa21.51■■□□□ 1.03
HMG20B-212ENST00000487894 CHMP3Q9Y3E7 222 aa21.51■■□□□ 1.03
HMG20B-212ENST00000487894 YDJCA8MPS7 323 aa21.5■■□□□ 1.03
HMG20B-212ENST00000487894 BCAR3O75815 825 aa21.5■■□□□ 1.03
HMG20B-212ENST00000487894 USP44Q9H0E7 712 aa21.5■■□□□ 1.03
HMG20B-212ENST00000487894 GJA3Q9Y6H8 435 aa21.5■■□□□ 1.03
HMG20B-212ENST00000487894 IQCA1LA6NCM1 817 aa21.49■■□□□ 1.03
HMG20B-212ENST00000487894 RIMBP2O15034 1052 aa21.49■■□□□ 1.03
HMG20B-212ENST00000487894 CCT4P50991 539 aaKnown RBP21.49■■□□□ 1.03
HMG20B-212ENST00000487894 CXCL9Q07325 125 aa21.49■■□□□ 1.03
HMG20B-212ENST00000487894 IFIT5Q13325 482 aaKnown RBP21.49■■□□□ 1.03
HMG20B-212ENST00000487894 ARHGAP45Q92619 1136 aa21.49■■□□□ 1.03
HMG20B-212ENST00000487894 MPHOSPH8Q99549 860 aa21.48■■□□□ 1.03
HMG20B-212ENST00000487894 BICC1Q9H694 974 aaKnown RBP21.48■■□□□ 1.03
HMG20B-212ENST00000487894 DBNDD1Q9H9R9 158 aa21.48■■□□□ 1.03
HMG20B-212ENST00000487894 WTIPA6NIX2 430 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-212ENST00000487894 ATP2B4P23634 1241 aa21.47■■□□□ 1.03
HMG20B-212ENST00000487894 RABL6Q3YEC7 729 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-212ENST00000487894 ANKRD44Q8N8A2 993 aa21.47■■□□□ 1.03
HMG20B-212ENST00000487894 TAF1DQ9H5J8 278 aaPredicted RBP21.47■■□□□ 1.03
HMG20B-212ENST00000487894 HACL1Q9UJ83 578 aa21.47■■□□□ 1.03
HMG20B-212ENST00000487894 MED23Q9ULK4 1368 aa21.47■■□□□ 1.03
HMG20B-212ENST00000487894 ECE2O60344 883 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 POTEIP0CG38 1075 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 POTEJP0CG39 1038 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 SCNN1DP51172 638 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 CCDC57Q2TAC2 916 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 CIAPIN1Q6FI81 312 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 ZC3H12CQ9C0D7 883 aaKnown RBP21.46■■□□□ 1.03
HMG20B-212ENST00000487894 TNNQ9UQP3 1299 aa21.46■■□□□ 1.03
HMG20B-212ENST00000487894 RAD17O75943 681 aa21.45■■□□□ 1.02
HMG20B-212ENST00000487894 TRIM27P14373 513 aa21.45■■□□□ 1.02
HMG20B-212ENST00000487894 FSTL1Q12841 308 aa21.45■■□□□ 1.02
HMG20B-212ENST00000487894 DOK7Q18PE1 504 aa21.45■■□□□ 1.02
HMG20B-212ENST00000487894 SMC1BQ8NDV3 1235 aa21.45■■□□□ 1.02
HMG20B-212ENST00000487894 ZNF594Q96JF6 807 aaPredicted RBP21.45■■□□□ 1.02
HMG20B-212ENST00000487894 HSPA6P17066 643 aa21.44■■□□□ 1.02
HMG20B-212ENST00000487894 EPHX2P34913 555 aa21.44■■□□□ 1.02
HMG20B-212ENST00000487894 CHRNDQ07001 517 aa21.44■■□□□ 1.02
HMG20B-212ENST00000487894 FRAT1Q92837 279 aaPredicted RBP21.44■■□□□ 1.02
HMG20B-212ENST00000487894 ANKRD2Q9GZV1 360 aa21.44■■□□□ 1.02
HMG20B-212ENST00000487894 IPO8O15397 1037 aaKnown RBP21.43■■□□□ 1.02
HMG20B-212ENST00000487894 TAF7LQ5H9L4 462 aa21.43■■□□□ 1.02
HMG20B-212ENST00000487894 INTS3Q68E01 1043 aaKnown RBP21.43■■□□□ 1.02
HMG20B-212ENST00000487894 ATF7IPQ6VMQ6 1270 aa21.43■■□□□ 1.02
HMG20B-212ENST00000487894 LEMD3Q9Y2U8 911 aa21.43■■□□□ 1.02
HMG20B-212ENST00000487894 LMOD1P29536 600 aaPredicted RBP21.42■■□□□ 1.02
HMG20B-212ENST00000487894 GMPSP49915 693 aaPredicted RBP21.42■■□□□ 1.02
HMG20B-212ENST00000487894 TNIP1Q15025 636 aa21.42■■□□□ 1.02
HMG20B-212ENST00000487894 ZNF804BA4D1E1 1349 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 PSMD14O00487 310 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 EPS15P42566 896 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 LDHAL6AQ6ZMR3 332 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 KCNQ5Q9NR82 932 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 GPRC5DQ9NZD1 345 aa21.41■■□□□ 1.02
HMG20B-212ENST00000487894 UBTFL1P0CB47 393 aaPredicted RBP21.4■■□□□ 1.02
HMG20B-212ENST00000487894 KLRK1P26718 216 aa21.4■■□□□ 1.02
HMG20B-212ENST00000487894 EAPPQ56P03 285 aaPredicted RBP21.4■■□□□ 1.02
HMG20B-212ENST00000487894 ZKSCAN2Q63HK3 967 aa21.4■■□□□ 1.02
HMG20B-212ENST00000487894 LDHDQ86WU2 507 aa21.4■■□□□ 1.02
HMG20B-212ENST00000487894 MEIS3Q99687 375 aa21.4■■□□□ 1.02
HMG20B-212ENST00000487894 ZNF609O15014 1411 aa21.39■■□□□ 1.02
HMG20B-212ENST00000487894 IRS2Q9Y4H2 1338 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 TAF5LO75529 589 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 CHADLQ6NUI6 762 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 PNMA8AQ86V59 439 aaPredicted RBP21.39■■□□□ 1.01
HMG20B-212ENST00000487894 TXNRD3Q86VQ6 643 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 HELBQ8NG08 1087 aaPredicted RBP21.39■■□□□ 1.01
HMG20B-212ENST00000487894 CLUAP1Q96AJ1 413 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 PUS3Q9BZE2 481 aaKnown RBP21.39■■□□□ 1.01
HMG20B-212ENST00000487894 CNNM1Q9NRU3 951 aa21.39■■□□□ 1.01
HMG20B-212ENST00000487894 G3V3G9 751 aa21.38■■□□□ 1.01
HMG20B-212ENST00000487894 SNAP23O00161 211 aa21.38■■□□□ 1.01
HMG20B-212ENST00000487894 DCAF8Q5TAQ9 597 aa21.38■■□□□ 1.01
HMG20B-212ENST00000487894 ZBTB12Q9Y330 459 aaPredicted RBP21.38■■□□□ 1.01
HMG20B-212ENST00000487894 ARAP2Q8WZ64 1704 aa21.38■■□□□ 1.01
HMG20B-212ENST00000487894 TRPM7Q96QT4 1865 aa21.37■■□□□ 1.01
HMG20B-212ENST00000487894 KCNJ4P48050 445 aa21.37■■□□□ 1.01
HMG20B-212ENST00000487894 LRRFIP2Q9Y608 721 aaKnown RBP21.37■■□□□ 1.01
HMG20B-212ENST00000487894 MYH13Q9UKX3 1938 aa21.37■■□□□ 1.01
HMG20B-212ENST00000487894 SHTN1A0MZ66 631 aa21.36■■□□□ 1.01
HMG20B-212ENST00000487894 RFX5P48382 616 aaPredicted RBP21.36■■□□□ 1.01
HMG20B-212ENST00000487894 PODNQ7Z5L7 613 aa21.36■■□□□ 1.01
HMG20B-212ENST00000487894 KLHDC4Q8TBB5 520 aa21.36■■□□□ 1.01
HMG20B-212ENST00000487894 ADARB2Q9NS39 739 aaKnown RBP21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 119.1 ms