RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 SKOR2Q2VWA4 1001 aaPredicted RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 MCMDC2Q4G0Z9 681 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 CREB3L3Q68CJ9 461 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 VGLL2Q8N8G2 317 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 ZNF594Q96JF6 807 aaPredicted RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 UTP14AQ9BVJ6 771 aaKnown RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 PUS3Q9BZE2 481 aaKnown RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 SH2B1Q9NRF2 756 aaPredicted RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 USP21Q9UK80 565 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 TBC1D2BQ9UPU7 963 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 U3KPZ7 1027 aaPredicted RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 MROH5Q6ZUA9 1318 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 SBF2Q86WG5 1849 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 AKAP11Q9UKA4 1901 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 GOLGA6L22H0YM25 854 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 ONECUT3O60422 494 aaPredicted RBP14.35□□□□□ -0.11
PKP4-213ENST00000486254 ZMYM1Q5SVZ6 1142 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 ZSCAN31Q96LW9 406 aaPredicted RBP14.35□□□□□ -0.11
PKP4-213ENST00000486254 NEUROD6Q96NK8 337 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 UPF3BQ9BZI7 483 aaKnown RBP14.35□□□□□ -0.11
PKP4-213ENST00000486254 GREM2Q9H772 168 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 LIMCH1Q9UPQ0 1083 aa14.35□□□□□ -0.11
PKP4-213ENST00000486254 SLC27A2O14975 620 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 IFIT1P09914 478 aaKnown RBP14.34□□□□□ -0.11
PKP4-213ENST00000486254 SSFA2P28290 1259 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 LDHAL6AQ6ZMR3 332 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 CERKQ8TCT0 537 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 DSCC1Q9BVC3 393 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 CYP46A1Q9Y6A2 500 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 TAF1LQ8IZX4 1826 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 NTSR2O95665 410 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 TIMM10P62072 90 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 ANKRD1Q15327 319 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 ATP2B3Q16720 1220 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 PRPF40BQ6NWY9 871 aaKnown RBP14.34□□□□□ -0.11
PKP4-213ENST00000486254 RUFY3Q7L099 469 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 XAGE2Q96GT9 111 aa14.34□□□□□ -0.11
PKP4-213ENST00000486254 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
PKP4-213ENST00000486254 KCNQ2O43526 872 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 PDE8BO95263 885 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 CASTP20810 708 aaKnown RBP14.33□□□□□ -0.12
PKP4-213ENST00000486254 CCDC152Q4G0S7 254 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 METTL24Q5JXM2 366 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 SUSD4Q5VX71 490 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 ZNF589Q86UQ0 364 aaPredicted RBP14.33□□□□□ -0.12
PKP4-213ENST00000486254 ARXQ96QS3 562 aa14.33□□□□□ -0.12
PKP4-213ENST00000486254 ISY1Q9ULR0 285 aaKnown RBP14.33□□□□□ -0.12
PKP4-213ENST00000486254 KCNJ4P48050 445 aa14.32□□□□□ -0.12
PKP4-213ENST00000486254 AK2P54819 239 aa14.32□□□□□ -0.12
PKP4-213ENST00000486254 DDX46Q7L014 1031 aaKnown RBP14.32□□□□□ -0.12
PKP4-213ENST00000486254 ZGPATQ8N5A5 531 aaKnown RBP14.32□□□□□ -0.12
PKP4-213ENST00000486254 EDC3Q96F86 508 aaKnown RBP14.32□□□□□ -0.12
PKP4-213ENST00000486254 JAKMIP1Q96N16 626 aaKnown RBP14.32□□□□□ -0.12
PKP4-213ENST00000486254 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.32□□□□□ -0.12
PKP4-213ENST00000486254 GOLIM4O00461 696 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 RNF113AO15541 343 aaKnown RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 BAG4O95429 457 aaKnown RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 BRD1O95696 1058 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 FGFR2P21802 821 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 TTF1Q15361 905 aaPredicted RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 PUM3Q15397 648 aaKnown RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 TTC39AQ5SRH9 613 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 SYNE4Q8N205 404 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 LINC00116Q8NCU8 138 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 GJD4Q96KN9 370 aaPredicted RBP14.31□□□□□ -0.12
PKP4-213ENST00000486254 CNNM1Q9NRU3 951 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 PDRG1Q9NUG6 133 aa14.31□□□□□ -0.12
PKP4-213ENST00000486254 TRAK2O60296 914 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 RPS6KA4O75676 772 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 HMGB1P09429 215 aaKnown RBP14.3□□□□□ -0.12
PKP4-213ENST00000486254 UQCRFS1P1P0C7P4 283 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 GORABQ5T7V8 394 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 LPIN2Q92539 896 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 FOXD4L1Q9NU39 408 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 NIP7Q9Y221 180 aaKnown RBP eCLIP14.3□□□□□ -0.12
PKP4-213ENST00000486254 DOCK2Q92608 1830 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 A0A1B0GUL6 1792 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 HMGB2P26583 209 aaKnown RBP14.3□□□□□ -0.12
PKP4-213ENST00000486254 ADCK5Q3MIX3 580 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 ZSCAN25Q6NSZ9 544 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 BLOC1S2Q6QNY1 142 aa14.3□□□□□ -0.12
PKP4-213ENST00000486254 CASZ1Q86V15 1759 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 ZBTB22O15209 634 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 RPS6KB1P23443 525 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 ADORA1P30542 326 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 SF3B3Q15393 1217 aaKnown RBP14.29□□□□□ -0.12
PKP4-213ENST00000486254 SLC10A5Q5PT55 438 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.29□□□□□ -0.129e-8■■■□□ 18
PKP4-213ENST00000486254 NARFQ9UHQ1 456 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 TRPC5Q9UL62 973 aaPredicted RBP14.29□□□□□ -0.12
PKP4-213ENST00000486254 ZDHHC9Q9Y397 364 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 MAST3O60307 1309 aa14.29□□□□□ -0.12
PKP4-213ENST00000486254 WDR33Q9C0J8 1336 aaKnown RBP14.29□□□□□ -0.12
PKP4-213ENST00000486254 APPBP2Q92624 585 aa14.28□□□□□ -0.12
PKP4-213ENST00000486254 CDC5LQ99459 802 aaKnown RBP14.28□□□□□ -0.12
PKP4-213ENST00000486254 NYXQ9GZU5 481 aa14.28□□□□□ -0.12
PKP4-213ENST00000486254 C4BP0C0L5 1744 aa14.28□□□□□ -0.12
PKP4-213ENST00000486254 A0A0G2JS52 829 aa14.27□□□□□ -0.12
PKP4-213ENST00000486254 SLC5A1P13866 664 aa14.27□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms