RNA–Protein interactions for RNA: ENST00000486159.5

TMEM39A-208, Transcript of transmembrane protein 39A, human

TSL 3

Gene TMEM39A, Length 826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TMEM39A-208	ENST00000486159	DBNDD1	Q9H9R9	158 aa		12.07	□□□□□ -0.48
TMEM39A-208	ENST00000486159	HYPK	Q9NX55	129 aa		12.07	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ABT1	Q9ULW3	272 aa	Known RBP	12.07	□□□□□ -0.48
TMEM39A-208	ENST00000486159	NSFL1C	Q9UNZ2	370 aa	Known RBP	12.07	□□□□□ -0.48
TMEM39A-208	ENST00000486159	WDR33	Q9C0J8	1336 aa	Known RBP	12.07	□□□□□ -0.48
TMEM39A-208	ENST00000486159	LRRC37A	A6NMS7	1700 aa		12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	USP50	Q70EL3	339 aa	Predicted RBP	12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	SUPT20H	Q8NEM7	779 aa		12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	TMX4	Q9H1E5	349 aa	Predicted RBP	12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	IFT57	Q9NWB7	429 aa		12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	SUPT16H	Q9Y5B9	1047 aa	Known RBP	12.06	□□□□□ -0.48
TMEM39A-208	ENST00000486159	PSMD14	O00487	310 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	AOC2	O75106	756 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	LBX1	P52954	281 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	SAMD7	Q7Z3H4	446 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	BCL2L13	Q9BXK5	485 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ADARB2	Q9NS39	739 aa	Known RBP	12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	WBP1L	Q9NX94	342 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	TRPM7	Q96QT4	1865 aa		12.05	□□□□□ -0.48
TMEM39A-208	ENST00000486159	C6orf229	H3BNL8	230 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	GNAI1	P63096	354 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	TRIM28	Q13263	835 aa	Known RBP	12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	PAXIP1	Q6ZW49	1069 aa	Predicted RBP	12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	G2E3	Q7L622	706 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	VPS33B	Q9H267	617 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	CNOT7	Q9UIV1	285 aa	Known RBP	12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	SCN9A	Q15858	1988 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	RTL9	Q8NET4	1388 aa		12.04	□□□□□ -0.48
TMEM39A-208	ENST00000486159	HSPA8	P11142	646 aa	Known RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	RPS8	P62241	208 aa	Known RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	WASHC4	Q2M389	1173 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	RBM26	Q5T8P6	1007 aa	Known RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	MICALL2	Q8IY33	904 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	TBC1D16	Q8TBP0	767 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	CAPNS2	Q96L46	248 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ZNF408	Q9H9D4	720 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	TSKS	Q9UJT2	592 aa		12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ASTN2	O75129	1339 aa	Predicted RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	POLR2A	P24928	1970 aa	Known RBP	12.03	□□□□□ -0.48
TMEM39A-208	ENST00000486159	ECE2	O60344	883 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CELF2	O95319	508 aa	Known RBP	12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	IGKV5-2	P06315	115 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	GOLGA2	Q08379	1002 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	USP48	Q86UV5	1035 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ZIC5	Q96T25	663 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	METTL22	Q9BUU2	404 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PGAP2	Q9UHJ9	254 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	MAP3K2	Q9Y2U5	619 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	SALL2	Q9Y467	1007 aa	Predicted RBP	12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TLL2	Q9Y6L7	1015 aa		12.02	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CTCF	P49711	727 aa	Predicted RBP	12.01	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TNIP1	Q15025	636 aa		12.01	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CWF19L2	Q2TBE0	894 aa	Known RBP	12.01	□□□□□ -0.49
TMEM39A-208	ENST00000486159	SCAF8	Q9UPN6	1271 aa	Known RBP	12.01	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PDE4DIP	Q5VU43	2346 aa		12.01	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PI4KAP2	A4QPH2	592 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ADM5	C9JUS6	153 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PCCA	P05165	728 aa	Predicted RBP	12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	SAPCD2	Q86UD0	394 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PI4KAP1	Q8N8J0	262 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	AIDA	Q96BJ3	306 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CWC25	Q9NXE8	425 aa	Predicted RBP	12	□□□□□ -0.49
TMEM39A-208	ENST00000486159	SPEF2	Q9C093	1822 aa		12	□□□□□ -0.49
TMEM39A-208	ENST00000486159		H7C1D1	291 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PDE8A	O60658	829 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	UFL1	O94874	794 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CCDC30	Q5VVM6	783 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TMC4	Q7Z404	712 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	WWC1	Q8IX03	1113 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CCDC191	Q8NCU4	936 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	MXD3	Q9BW11	206 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PRDM10	Q9NQV6	1147 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	FBXO3	Q9UK99	471 aa		11.99	□□□□□ -0.49
TMEM39A-208	ENST00000486159	THSD7B	Q9C0I4	1608 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ZNF521	Q96K83	1311 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	KSR2	Q6VAB6	950 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	REM2	Q8IYK8	340 aa	Predicted RBP	11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	GREM2	Q9H772	168 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	PODXL2	Q9NZ53	605 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ANKIB1	Q9P2G1	1089 aa		11.98	□□□□□ -0.49
TMEM39A-208	ENST00000486159	VIL1	P09327	827 aa	Known RBP	11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CALD1	Q05682	793 aa	Known RBP	11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TWISTNB	Q3B726	338 aa	Predicted RBP	11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CCDC152	Q4G0S7	254 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CDC37L1	Q7L3B6	337 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TTLL11	Q8NHH1	800 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	DPF2	Q92785	391 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ABHD8	Q96I13	439 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	GGA1	Q9UJY5	639 aa		11.97	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CDHR2	Q9BYE9	1310 aa		11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	NEURL1B	A8MQ27	555 aa		11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	RGS19	P49795	217 aa		11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	CTSW	P56202	376 aa		11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	MAP2K1	Q02750	393 aa	Predicted RBP	11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	TXNRD3	Q86VQ6	643 aa		11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	ZC3H15	Q8WU90	426 aa	Known RBP	11.96	□□□□□ -0.49
TMEM39A-208	ENST00000486159	EYA3	Q99504	573 aa		11.96	□□□□□ -0.49

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