RNA–Protein interactions for RNA: ENST00000485870.1

COL1A1-206, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 403 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-206ENST00000485870 GGA1Q9UJY5 639 aa23.32■■□□□ 1.32
COL1A1-206ENST00000485870 EPHX2P34913 555 aa23.31■■□□□ 1.32
COL1A1-206ENST00000485870 IGHMBP2P38935 993 aaKnown RBP23.31■■□□□ 1.32
COL1A1-206ENST00000485870 CXCL9Q07325 125 aa23.31■■□□□ 1.32
COL1A1-206ENST00000485870 EAPPQ56P03 285 aaPredicted RBP23.31■■□□□ 1.32
COL1A1-206ENST00000485870 DBNDD1Q9H9R9 158 aa23.31■■□□□ 1.32
COL1A1-206ENST00000485870 BSDC1Q9NW68 430 aaPredicted RBP23.31■■□□□ 1.32
COL1A1-206ENST00000485870 CHMP3Q9Y3E7 222 aa23.31■■□□□ 1.32
COL1A1-206ENST00000485870 RAD17O75943 681 aa23.3■■□□□ 1.32
COL1A1-206ENST00000485870 LMOD1P29536 600 aaPredicted RBP23.3■■□□□ 1.32
COL1A1-206ENST00000485870 FOXO4P98177 505 aa23.3■■□□□ 1.32
COL1A1-206ENST00000485870 XDHP47989 1333 aa23.3■■□□□ 1.32
COL1A1-206ENST00000485870 YDJCA8MPS7 323 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 APLP1P51693 650 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 DOK7Q18PE1 504 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 EPHA10Q5JZY3 1008 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 CIAPIN1Q6FI81 312 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 MINPP1Q9UNW1 487 aa23.29■■□□□ 1.32
COL1A1-206ENST00000485870 ANKRD18BA2A2Z9 1011 aa23.28■■□□□ 1.32
COL1A1-206ENST00000485870 SCNN1DP51172 638 aa23.28■■□□□ 1.32
COL1A1-206ENST00000485870 CHADLQ6NUI6 762 aa23.28■■□□□ 1.32
COL1A1-206ENST00000485870 LMBR1LQ6UX01 489 aa23.28■■□□□ 1.32
COL1A1-206ENST00000485870 ZC3H12CQ9C0D7 883 aaKnown RBP23.28■■□□□ 1.32
COL1A1-206ENST00000485870 ECE2O60344 883 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 ATP2B4P23634 1241 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 EPS15P42566 896 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 TNIP1Q15025 636 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 LDHDQ86WU2 507 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 MPHOSPH8Q99549 860 aa23.27■■□□□ 1.32
COL1A1-206ENST00000485870 NBPF7P0C2Y1 421 aaPredicted RBP23.26■■□□□ 1.31
COL1A1-206ENST00000485870 GMPSP49915 693 aaPredicted RBP23.26■■□□□ 1.31
COL1A1-206ENST00000485870 IFIT5Q13325 482 aaKnown RBP23.26■■□□□ 1.31
COL1A1-206ENST00000485870 SUCLG2Q96I99 432 aa23.26■■□□□ 1.31
COL1A1-206ENST00000485870 NOB1Q9ULX3 412 aaKnown RBP23.26■■□□□ 1.31
COL1A1-206ENST00000485870 CLEC11AQ9Y240 323 aa23.26■■□□□ 1.31
COL1A1-206ENST00000485870 WTIPA6NIX2 430 aaPredicted RBP23.25■■□□□ 1.31
COL1A1-206ENST00000485870 G3V3G9 751 aa23.25■■□□□ 1.31
COL1A1-206ENST00000485870 RARSP54136 660 aaKnown RBP23.25■■□□□ 1.31
COL1A1-206ENST00000485870 DCAF8Q5TAQ9 597 aa23.25■■□□□ 1.31
COL1A1-206ENST00000485870 PNMA8AQ86V59 439 aaPredicted RBP23.25■■□□□ 1.31
COL1A1-206ENST00000485870 HTRA3P83110 453 aa23.24■■□□□ 1.31
COL1A1-206ENST00000485870 GPRC5DQ9NZD1 345 aa23.24■■□□□ 1.31
COL1A1-206ENST00000485870 PSMD14O00487 310 aa23.23■■□□□ 1.31
COL1A1-206ENST00000485870 CCT4P50991 539 aaKnown RBP23.23■■□□□ 1.31
COL1A1-206ENST00000485870 CCDC57Q2TAC2 916 aa23.23■■□□□ 1.31
COL1A1-206ENST00000485870 KCNQ5Q9NR82 932 aa23.23■■□□□ 1.31
COL1A1-206ENST00000485870 UTYO14607 1347 aa23.23■■□□□ 1.31
COL1A1-206ENST00000485870 ADAMTSL1Q8N6G6 1762 aa23.22■■□□□ 1.31
COL1A1-206ENST00000485870 TAF7LQ5H9L4 462 aa23.22■■□□□ 1.31
COL1A1-206ENST00000485870 KAZALD1Q96I82 304 aa23.22■■□□□ 1.31
COL1A1-206ENST00000485870 SCN9AQ15858 1988 aa23.21■■□□□ 1.31
COL1A1-206ENST00000485870 BRPF1P55201 1214 aaPredicted RBP23.21■■□□□ 1.31
COL1A1-206ENST00000485870 ZNF594Q96JF6 807 aaPredicted RBP23.21■■□□□ 1.31
COL1A1-206ENST00000485870 ANKRD2Q9GZV1 360 aa23.21■■□□□ 1.31
COL1A1-206ENST00000485870 ZBTB12Q9Y330 459 aaPredicted RBP23.21■■□□□ 1.31
COL1A1-206ENST00000485870 MED23Q9ULK4 1368 aa23.2■■□□□ 1.3
COL1A1-206ENST00000485870 CHRNDQ07001 517 aa23.2■■□□□ 1.3
COL1A1-206ENST00000485870 API5Q9BZZ5 524 aaKnown RBP23.2■■□□□ 1.3
COL1A1-206ENST00000485870 USP44Q9H0E7 712 aa23.2■■□□□ 1.3
COL1A1-206ENST00000485870 BICC1Q9H694 974 aaKnown RBP23.2■■□□□ 1.3
COL1A1-206ENST00000485870 KIF16BQ96L93 1317 aa23.19■■□□□ 1.3
COL1A1-206ENST00000485870 MAP1SQ66K74 1059 aaPredicted RBP23.19■■□□□ 1.3
COL1A1-206ENST00000485870 USP50Q70EL3 339 aaPredicted RBP23.19■■□□□ 1.3
COL1A1-206ENST00000485870 ADARB2Q9NS39 739 aaKnown RBP23.19■■□□□ 1.3
COL1A1-206ENST00000485870 LEMD3Q9Y2U8 911 aa23.19■■□□□ 1.3
COL1A1-206ENST00000485870 ZNF804BA4D1E1 1349 aa23.18■■□□□ 1.3
COL1A1-206ENST00000485870 SHTN1A0MZ66 631 aa23.18■■□□□ 1.3
COL1A1-206ENST00000485870 KCNJ4P48050 445 aa23.18■■□□□ 1.3
COL1A1-206ENST00000485870 HELBQ8NG08 1087 aaPredicted RBP23.18■■□□□ 1.3
COL1A1-206ENST00000485870 CNOT7Q9UIV1 285 aaKnown RBP23.18■■□□□ 1.3
COL1A1-206ENST00000485870 ZBED9Q6R2W3 1325 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 LDHAL6AQ6ZMR3 332 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 MICALL2Q8IY33 904 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 ANKRD44Q8N8A2 993 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 CNNM1Q9NRU3 951 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 A0A1B0GUL6 1792 aa23.17■■□□□ 1.3
COL1A1-206ENST00000485870 TAF5LO75529 589 aa23.16■■□□□ 1.3
COL1A1-206ENST00000485870 BCAR3O75815 825 aa23.16■■□□□ 1.3
COL1A1-206ENST00000485870 KLRK1P26718 216 aa23.16■■□□□ 1.3
COL1A1-206ENST00000485870 TXNRD3Q86VQ6 643 aa23.16■■□□□ 1.3
COL1A1-206ENST00000485870 CNTROBQ8N137 903 aa23.16■■□□□ 1.3
COL1A1-206ENST00000485870 H7C1D1 291 aa23.15■■□□□ 1.3
COL1A1-206ENST00000485870 SNAP23O00161 211 aa23.15■■□□□ 1.3
COL1A1-206ENST00000485870 RABL6Q3YEC7 729 aaPredicted RBP23.15■■□□□ 1.3
COL1A1-206ENST00000485870 DPF2Q92785 391 aa23.15■■□□□ 1.3
COL1A1-206ENST00000485870 PASKQ96RG2 1323 aa23.14■■□□□ 1.3
COL1A1-206ENST00000485870 PLIN1O60240 522 aa23.14■■□□□ 1.29
COL1A1-206ENST00000485870 ITGBL1O95965 494 aaPredicted RBP23.14■■□□□ 1.29
COL1A1-206ENST00000485870 VIL1P09327 827 aaKnown RBP23.14■■□□□ 1.29
COL1A1-206ENST00000485870 RPS12P25398 132 aaKnown RBP23.14■■□□□ 1.29
COL1A1-206ENST00000485870 PODNQ7Z5L7 613 aa23.14■■□□□ 1.29
COL1A1-206ENST00000485870 TRPM4Q8TD43 1214 aa23.14■■□□□ 1.29
COL1A1-206ENST00000485870 FRAT1Q92837 279 aaPredicted RBP23.14■■□□□ 1.29
COL1A1-206ENST00000485870 PSME4Q14997 1843 aa23.14■■□□□ 1.29
COL1A1-206ENST00000485870 DNAJC5GQ8N7S2 189 aa23.13■■□□□ 1.29
COL1A1-206ENST00000485870 ARHGAP45Q92619 1136 aa23.13■■□□□ 1.29
COL1A1-206ENST00000485870 PUS3Q9BZE2 481 aaKnown RBP23.13■■□□□ 1.29
COL1A1-206ENST00000485870 USP17L3A6NCW0 530 aa23.12■■□□□ 1.29
COL1A1-206ENST00000485870 USP17L4A6NCW7 530 aa23.12■■□□□ 1.29
COL1A1-206ENST00000485870 UBTFL1P0CB47 393 aaPredicted RBP23.12■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms