RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 PPIP5K2O43314 1243 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 UFL1O94874 794 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 AOC3Q16853 763 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 C20orf194Q5TEA3 1177 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 LARGE2Q8N3Y3 721 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 MINPP1Q9UNW1 487 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 COG6Q9Y2V7 657 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 XDHP47989 1333 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 A0A1B0GUL6 1792 aa14.82□□□□□ -0.04
HPS4-214ENST00000485842 COL4A5P29400 1685 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 GNAI2P04899 355 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 MVPQ14764 893 aaKnown RBP14.81□□□□□ -0.04
HPS4-214ENST00000485842 LDHAL6AQ6ZMR3 332 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 ZNF526Q8TF50 670 aaPredicted RBP14.81□□□□□ -0.04
HPS4-214ENST00000485842 GPR101Q96P66 508 aaPredicted RBP14.81□□□□□ -0.04
HPS4-214ENST00000485842 RTFDC1Q9BY42 306 aaPredicted RBP14.81□□□□□ -0.04
HPS4-214ENST00000485842 C1orf115Q9H7X2 142 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 CNNM1Q9NRU3 951 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 GGA1Q9UJY5 639 aa14.81□□□□□ -0.04
HPS4-214ENST00000485842 UTRNP46939 3433 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 RRP1P56182 461 aaKnown RBP14.8□□□□□ -0.04
HPS4-214ENST00000485842 CHRNDQ07001 517 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 HELBQ8NG08 1087 aaPredicted RBP14.8□□□□□ -0.04
HPS4-214ENST00000485842 KLHDC4Q8TBB5 520 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 TBC1D16Q8TBP0 767 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 JDP2Q8WYK2 163 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 PUS3Q9BZE2 481 aaKnown RBP14.8□□□□□ -0.04
HPS4-214ENST00000485842 PODXL2Q9NZ53 605 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 POLLQ9UGP5 575 aa14.8□□□□□ -0.04
HPS4-214ENST00000485842 RIMBP2O15034 1052 aa14.79□□□□□ -0.04
HPS4-214ENST00000485842 PDE3AQ14432 1141 aa14.79□□□□□ -0.04
HPS4-214ENST00000485842 NIM1KQ8IY84 436 aa14.79□□□□□ -0.04
HPS4-214ENST00000485842 EYA3Q99504 573 aa14.79□□□□□ -0.04
HPS4-214ENST00000485842 ANKRD2Q9GZV1 360 aa14.79□□□□□ -0.04
HPS4-214ENST00000485842 ZC3H4Q9UPT8 1303 aaKnown RBP14.78□□□□□ -0.04
HPS4-214ENST00000485842 ZBTB7BO15156 539 aaPredicted RBP14.78□□□□□ -0.04
HPS4-214ENST00000485842 SRGAP3O43295 1099 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 TAF5LO75529 589 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 ATP2B4P23634 1241 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 KCNJ4P48050 445 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 RFX5P48382 616 aaPredicted RBP14.78□□□□□ -0.04
HPS4-214ENST00000485842 KIAA2012Q0VF49 1180 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 WASHC4Q2M389 1173 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 DDX19BQ9UMR2 479 aa14.78□□□□□ -0.04
HPS4-214ENST00000485842 ZNF541Q9H0D2 1346 aa14.77□□□□□ -0.04
HPS4-214ENST00000485842 WTIPA6NIX2 430 aaPredicted RBP14.77□□□□□ -0.05
HPS4-214ENST00000485842 LRRC24Q50LG9 513 aa14.77□□□□□ -0.05
HPS4-214ENST00000485842 ZNF784Q8NCA9 323 aaPredicted RBP14.77□□□□□ -0.05
HPS4-214ENST00000485842 SIL1Q9H173 461 aa14.77□□□□□ -0.05
HPS4-214ENST00000485842 VPS33BQ9H267 617 aa14.77□□□□□ -0.05
HPS4-214ENST00000485842 PA2G4Q9UQ80 394 aaKnown RBP14.77□□□□□ -0.05
HPS4-214ENST00000485842 ZNF804BA4D1E1 1349 aa14.76□□□□□ -0.05
HPS4-214ENST00000485842 SNAP23O00161 211 aa14.76□□□□□ -0.05
HPS4-214ENST00000485842 PTPN12Q05209 780 aaKnown RBP14.76□□□□□ -0.05
HPS4-214ENST00000485842 MTX1Q13505 466 aa14.76□□□□□ -0.05
HPS4-214ENST00000485842 ZC3H12CQ9C0D7 883 aaKnown RBP14.76□□□□□ -0.05
HPS4-214ENST00000485842 DBNDD1Q9H9R9 158 aa14.76□□□□□ -0.05
HPS4-214ENST00000485842 LEMD3Q9Y2U8 911 aa14.76□□□□□ -0.05
HPS4-214ENST00000485842 MROH5Q6ZUA9 1318 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 PNMA6EA0A0J9YXQ4 647 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 G3V3G9 751 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 EYA2O00167 538 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 EIF6P56537 245 aaKnown RBP14.75□□□□□ -0.05
HPS4-214ENST00000485842 DOK7Q18PE1 504 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 METTL24Q5JXM2 366 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 DCAF8Q5TAQ9 597 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 RIPOR2Q9Y4F9 1068 aa14.75□□□□□ -0.05
HPS4-214ENST00000485842 MED23Q9ULK4 1368 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 KDM2BQ8NHM5 1336 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 FZD9O00144 591 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 ECE2O60344 883 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 KLRK1P26718 216 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 DPY19L2Q6NUT2 758 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 CHMP4BQ9H444 224 aaKnown RBP14.74□□□□□ -0.05
HPS4-214ENST00000485842 GPBP1L1Q9HC44 474 aaPredicted RBP14.74□□□□□ -0.05
HPS4-214ENST00000485842 ZNRF3Q9ULT6 936 aa14.74□□□□□ -0.05
HPS4-214ENST00000485842 GLTPD2A6NH11 291 aa14.73□□□□□ -0.05
HPS4-214ENST00000485842 DDNO94850 711 aaPredicted RBP14.73□□□□□ -0.05
HPS4-214ENST00000485842 COPRSQ9NQ92 184 aa14.73□□□□□ -0.05
HPS4-214ENST00000485842 GJA3Q9Y6H8 435 aa14.73□□□□□ -0.05
HPS4-214ENST00000485842 RAD17O75943 681 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 ATP8B2P98198 1209 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 CEP85Q6P2H3 762 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 ATG9AQ7Z3C6 839 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 TXNRD3Q86VQ6 643 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 NMRK2Q9NPI5 230 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 ZBTB40Q9NUA8 1239 aa14.72□□□□□ -0.05
HPS4-214ENST00000485842 SCN9AQ15858 1988 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 YDJCA8MPS7 323 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 CIAO1O76071 339 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 POLA2Q14181 598 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 VGLL2Q8N8G2 317 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 CRBNQ96SW2 442 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 FBXO3Q9UK99 471 aa14.71□□□□□ -0.05
HPS4-214ENST00000485842 SUPT16HQ9Y5B9 1047 aaKnown RBP14.71□□□□□ -0.05
HPS4-214ENST00000485842 WDR90Q96KV7 1748 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 PDE8BO95263 885 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 IL15P40933 162 aaPredicted RBP14.7□□□□□ -0.06
HPS4-214ENST00000485842 CXCL9Q07325 125 aa14.7□□□□□ -0.06
HPS4-214ENST00000485842 OS9Q13438 667 aaPredicted RBP14.7□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms