RNA–Protein interactions for RNA: ENST00000485618.1

SF3A1-208, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-208ENST00000485618 BSDC1Q9NW68 430 aaPredicted RBP10.31□□□□□ -0.76
SF3A1-208ENST00000485618 PCNTO95613 3336 aa10.31□□□□□ -0.76
SF3A1-208ENST00000485618 LTBP3Q9NS15 1303 aa10.31□□□□□ -0.76
SF3A1-208ENST00000485618 POTECB2RU33 542 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 PLIN1O60240 522 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 RRP1P56182 461 aaKnown RBP10.3□□□□□ -0.76
SF3A1-208ENST00000485618 DPP8Q6V1X1 898 aaPredicted RBP10.3□□□□□ -0.76
SF3A1-208ENST00000485618 LDHAL6AQ6ZMR3 332 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 C3orf67Q6ZVT6 689 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 MPNDQ8N594 471 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 SUCLG2Q96I99 432 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 EYA3Q99504 573 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 BICC1Q9H694 974 aaKnown RBP10.3□□□□□ -0.76
SF3A1-208ENST00000485618 CNNM1Q9NRU3 951 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 ANKIB1Q9P2G1 1089 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 FBXO3Q9UK99 471 aa10.3□□□□□ -0.76
SF3A1-208ENST00000485618 DICER1Q9UPY3 1922 aaKnown RBP10.3□□□□□ -0.76
SF3A1-208ENST00000485618 SLX4Q8IY92 1834 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 G3V3G9 751 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 ZBTB7BO15156 539 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-208ENST00000485618 HMMRO75330 724 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 KCNJ4P48050 445 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 FKBP4Q02790 459 aaKnown RBP eCLIP10.29□□□□□ -0.76
SF3A1-208ENST00000485618 FAM161AQ3B820 660 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 RABL6Q3YEC7 729 aaPredicted RBP10.29□□□□□ -0.76
SF3A1-208ENST00000485618 DCAF8Q5TAQ9 597 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 CHADLQ6NUI6 762 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 C7orf43Q8WVR3 580 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 PSMD1Q99460 953 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 MEIS3Q99687 375 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 NSFL1CQ9UNZ2 370 aaKnown RBP10.29□□□□□ -0.76
SF3A1-208ENST00000485618 COG6Q9Y2V7 657 aa10.29□□□□□ -0.76
SF3A1-208ENST00000485618 LRRFIP2Q9Y608 721 aaKnown RBP10.29□□□□□ -0.76
SF3A1-208ENST00000485618 C6orf229H3BNL8 230 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 SRGAP3O43295 1099 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 DDNO94850 711 aaPredicted RBP10.28□□□□□ -0.76
SF3A1-208ENST00000485618 POTEIP0CG38 1075 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 POTEJP0CG39 1038 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 RLBP1P12271 317 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 ATP2B4P23634 1241 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 JDP2Q8WYK2 163 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 CELF1Q92879 486 aaKnown RBP10.28□□□□□ -0.76
SF3A1-208ENST00000485618 ZC3H12CQ9C0D7 883 aaKnown RBP10.28□□□□□ -0.76
SF3A1-208ENST00000485618 SEC31BQ9NQW1 1179 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 CREBZFQ9NS37 354 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 MKRN1Q9UHC7 482 aaKnown RBP10.28□□□□□ -0.76
SF3A1-208ENST00000485618 GGA1Q9UJY5 639 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 MROH5Q6ZUA9 1318 aa10.28□□□□□ -0.76
SF3A1-208ENST00000485618 HSP90AB4PQ58FF6 505 aa10.27□□□□□ -0.77
SF3A1-208ENST00000485618 RPAP2Q8IXW5 612 aaPredicted RBP10.27□□□□□ -0.77
SF3A1-208ENST00000485618 LEMD3Q9Y2U8 911 aa10.27□□□□□ -0.77
SF3A1-208ENST00000485618 SUPT16HQ9Y5B9 1047 aaKnown RBP10.27□□□□□ -0.77
SF3A1-208ENST00000485618 XDHP47989 1333 aa10.27□□□□□ -0.77
SF3A1-208ENST00000485618 IQCA1LA6NCM1 817 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 CIAO1O76071 339 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 ATP8B2P98198 1209 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 G3BP1Q13283 466 aaKnown RBP eCLIP10.26□□□□□ -0.773e-6■■■□□ 15.3
SF3A1-208ENST00000485618 MTX1Q13505 466 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 WASHC4Q2M389 1173 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 EPHA10Q5JZY3 1008 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 ANKRD44Q8N8A2 993 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 KAZALD1Q96I82 304 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 RTFDC1Q9BY42 306 aaPredicted RBP10.26□□□□□ -0.77
SF3A1-208ENST00000485618 ZBTB40Q9NUA8 1239 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 PODXL2Q9NZ53 605 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 MINPP1Q9UNW1 487 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 MYH3P11055 1940 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 LAMB2P55268 1798 aa10.26□□□□□ -0.77
SF3A1-208ENST00000485618 DDX60Q8IY21 1712 aaKnown RBP10.25□□□□□ -0.77
SF3A1-208ENST00000485618 UFL1O94874 794 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 IL15P40933 162 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-208ENST00000485618 OS9Q13438 667 aaPredicted RBP10.25□□□□□ -0.77
SF3A1-208ENST00000485618 METTL24Q5JXM2 366 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 LDHDQ86WU2 507 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 LARGE2Q8N3Y3 721 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 COPRSQ9NQ92 184 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 CEP126Q9P2H0 1117 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 TNNQ9UQP3 1299 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 AKAP2Q9Y2D5 859 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 ZNF541Q9H0D2 1346 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 CNTNAP1P78357 1384 aa10.25□□□□□ -0.77
SF3A1-208ENST00000485618 SCN4AP35499 1836 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 EYA2O00167 538 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 PPIP5K2O43314 1243 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 IARSP41252 1262 aaKnown RBP10.24□□□□□ -0.77
SF3A1-208ENST00000485618 GPSM2P81274 684 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 EAPPQ56P03 285 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-208ENST00000485618 ERC1Q8IUD2 1116 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 NIM1KQ8IY84 436 aa10.24□□□□□ -0.77
SF3A1-208ENST00000485618 L3MBTL3Q96JM7 780 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-208ENST00000485618 TAF1DQ9H5J8 278 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-208ENST00000485618 ZNF277Q9NRM2 450 aaPredicted RBP10.24□□□□□ -0.77
SF3A1-208ENST00000485618 NEFLP07196 543 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 EIF6P56537 245 aaKnown RBP10.23□□□□□ -0.77
SF3A1-208ENST00000485618 CHRNDQ07001 517 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 UBE4AQ14139 1066 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 CAVIN4Q5BKX8 364 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 C20orf194Q5TEA3 1177 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 OLFM4Q6UX06 510 aa10.23□□□□□ -0.77
SF3A1-208ENST00000485618 VPS37DQ86XT2 251 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms