RNA–Protein interactions for RNA: ENST00000483969.5

COL8A1-207, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 3

Gene COL8A1, Length 832 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-207ENST00000483969 C1QTNF2Q9BXJ5 285 aa11.87□□□□□ -0.51
COL8A1-207ENST00000483969 RGPD5Q99666 1765 aa11.87□□□□□ -0.51
COL8A1-207ENST00000483969 MYBBP1AQ9BQG0 1328 aaKnown RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 PARP4Q9UKK3 1724 aaKnown RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 U2AF1L5P0DN76 240 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 U2AF1Q01081 240 aaKnown RBP eCLIP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 ZNF530Q6P9A1 599 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 PRKRIP1Q9H875 184 aaPredicted RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 MAP4K5Q9Y4K4 846 aa11.86□□□□□ -0.51
COL8A1-207ENST00000483969 KDRP35968 1356 aa11.86□□□□□ -0.51
COL8A1-207ENST00000483969 FAM208AQ9UK61 1670 aaKnown RBP11.86□□□□□ -0.51
COL8A1-207ENST00000483969 NR3C2P08235 984 aa11.85□□□□□ -0.51
COL8A1-207ENST00000483969 PTF1AQ7RTS3 328 aa11.85□□□□□ -0.51
COL8A1-207ENST00000483969 SH3RF1Q7Z6J0 888 aa11.85□□□□□ -0.51
COL8A1-207ENST00000483969 GPKOWQ92917 476 aaPredicted RBP eCLIP11.85□□□□□ -0.51
COL8A1-207ENST00000483969 PNNQ9H307 717 aaKnown RBP11.85□□□□□ -0.51
COL8A1-207ENST00000483969 FAM181BA6NEQ2 426 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 NEFMP07197 916 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 HMGB2P26583 209 aaKnown RBP11.84□□□□□ -0.51
COL8A1-207ENST00000483969 GMPRP36959 345 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 TRMT44Q8IYL2 757 aaKnown RBP11.84□□□□□ -0.51
COL8A1-207ENST00000483969 ITPKCQ96DU7 683 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 DCAF5Q96JK2 942 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 ZFAND3Q9H8U3 227 aa11.84□□□□□ -0.51
COL8A1-207ENST00000483969 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.51
COL8A1-207ENST00000483969 LRRC37A3O60309 1634 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 ERVV-2B6SEH9 535 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 ANP32CO43423 234 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 GRM5P41594 1212 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 AKAP4Q5JQC9 854 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 MPRIPQ6WCQ1 1025 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 SH3BP5LQ7L8J4 393 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 GAS2L2Q8NHY3 880 aa11.83□□□□□ -0.52
COL8A1-207ENST00000483969 MAP2P11137 1827 aaKnown RBP11.83□□□□□ -0.52
COL8A1-207ENST00000483969 UPP2O95045 317 aa11.82□□□□□ -0.52
COL8A1-207ENST00000483969 FSHRP23945 695 aa11.82□□□□□ -0.52
COL8A1-207ENST00000483969 VEGFBP49765 207 aa11.82□□□□□ -0.52
COL8A1-207ENST00000483969 TXNRD1Q16881 649 aa11.82□□□□□ -0.52
COL8A1-207ENST00000483969 MTHFSDQ2M296 383 aaKnown RBP11.82□□□□□ -0.52
COL8A1-207ENST00000483969 RTL5Q5HYW3 569 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-207ENST00000483969 SMARCC1Q92922 1105 aaPredicted RBP11.82□□□□□ -0.52
COL8A1-207ENST00000483969 TMOD3Q9NYL9 352 aa11.82□□□□□ -0.52
COL8A1-207ENST00000483969 PRKAR2BP31323 418 aa11.81□□□□□ -0.52
COL8A1-207ENST00000483969 CABP4P57796 275 aa11.81□□□□□ -0.52
COL8A1-207ENST00000483969 SLC27A3Q5K4L6 730 aa11.8□□□□□ -0.52
COL8A1-207ENST00000483969 MEIOBQ8N635 442 aa11.8□□□□□ -0.52
COL8A1-207ENST00000483969 PIGBQ92521 554 aa11.8□□□□□ -0.52
COL8A1-207ENST00000483969 COL3A1P02461 1466 aaPredicted RBP11.8□□□□□ -0.52
COL8A1-207ENST00000483969 GNAT3A8MTJ3 354 aa11.79□□□□□ -0.52
COL8A1-207ENST00000483969 WDR43Q15061 677 aaKnown RBP eCLIP11.79□□□□□ -0.52
COL8A1-207ENST00000483969 VASH1Q7L8A9 365 aaPredicted RBP11.79□□□□□ -0.52
COL8A1-207ENST00000483969 LINC00528Q8N1L1 170 aa11.79□□□□□ -0.52
COL8A1-207ENST00000483969 ERBB4Q15303 1308 aa11.79□□□□□ -0.52
COL8A1-207ENST00000483969 MAGEB6P1A0A0J9YX57 407 aa11.78□□□□□ -0.52
COL8A1-207ENST00000483969 MAN1A2O60476 641 aa11.78□□□□□ -0.52
COL8A1-207ENST00000483969 C6orf118Q5T5N4 469 aa11.78□□□□□ -0.52
COL8A1-207ENST00000483969 ZSCAN1Q8NBB4 408 aa11.78□□□□□ -0.52
COL8A1-207ENST00000483969 PHACTR3Q96KR7 559 aa11.78□□□□□ -0.52
COL8A1-207ENST00000483969 RNMTO43148 476 aaKnown RBP11.77□□□□□ -0.53
COL8A1-207ENST00000483969 HTATSF1O43719 755 aaKnown RBP11.77□□□□□ -0.53
COL8A1-207ENST00000483969 VSIG8P0DPA2 414 aa11.77□□□□□ -0.53
COL8A1-207ENST00000483969 NFATC2IPQ8NCF5 419 aa11.77□□□□□ -0.53
COL8A1-207ENST00000483969 RTF1Q92541 710 aaKnown RBP11.77□□□□□ -0.53
COL8A1-207ENST00000483969 LGR6Q9HBX8 967 aa11.77□□□□□ -0.53
COL8A1-207ENST00000483969 POLR3EQ9NVU0 708 aa11.77□□□□□ -0.53
COL8A1-207ENST00000483969 STK32BQ9NY57 414 aa11.77□□□□□ -0.53
COL8A1-207ENST00000483969 SOBPA7XYQ1 873 aa11.76□□□□□ -0.53
COL8A1-207ENST00000483969 BMP2P12643 396 aa11.76□□□□□ -0.53
COL8A1-207ENST00000483969 R3HDM1Q15032 1099 aaKnown RBP11.76□□□□□ -0.53
COL8A1-207ENST00000483969 CCNL1Q9UK58 526 aaPredicted RBP11.76□□□□□ -0.53
COL8A1-207ENST00000483969 RGPD1P0DJD0 1748 aa11.76□□□□□ -0.53
COL8A1-207ENST00000483969 MAPK8IP3Q9UPT6 1336 aa11.76□□□□□ -0.53
COL8A1-207ENST00000483969 RGPD2P0DJD1 1756 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 WNK3Q9BYP7 1800 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 TEFQ10587 303 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 CCDC116Q8IYX3 515 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 PLEKHF1Q96S99 279 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 SLC52A2Q9HAB3 445 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 ATG3Q9NT62 314 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 ASAP1Q9ULH1 1129 aa11.75□□□□□ -0.53
COL8A1-207ENST00000483969 SLC15A2Q16348 729 aa11.74□□□□□ -0.53
COL8A1-207ENST00000483969 IL17REQ8NFR9 667 aa11.74□□□□□ -0.53
COL8A1-207ENST00000483969 LRRC4BQ9NT99 713 aa11.74□□□□□ -0.53
COL8A1-207ENST00000483969 ZC3H4Q9UPT8 1303 aaKnown RBP11.74□□□□□ -0.53
COL8A1-207ENST00000483969 PALLDQ8WX93 1383 aa11.74□□□□□ -0.53
COL8A1-207ENST00000483969 LOC102724428A0A0B4J2F2 783 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 SIK1P57059 783 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 NFE2L2Q16236 605 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 ERFEQ4G0M1 354 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 RUNDC1Q96C34 613 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 MAP3K5Q99683 1374 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 TSEN34Q9BSV6 310 aaKnown RBP11.73□□□□□ -0.53
COL8A1-207ENST00000483969 CDV3Q9UKY7 258 aaKnown RBP11.73□□□□□ -0.53
COL8A1-207ENST00000483969 ADAMTS8Q9UP79 889 aa11.73□□□□□ -0.53
COL8A1-207ENST00000483969 KDM6AO15550 1401 aaPredicted RBP11.72□□□□□ -0.53
COL8A1-207ENST00000483969 SH3D19Q5HYK7 790 aa11.72□□□□□ -0.53
COL8A1-207ENST00000483969 PDXDC2PQ6P474 469 aa11.72□□□□□ -0.53
COL8A1-207ENST00000483969 FKBPLQ9UIM3 349 aa11.72□□□□□ -0.53
COL8A1-207ENST00000483969 LORP23490 312 aaPredicted RBP11.71□□□□□ -0.53
COL8A1-207ENST00000483969 KCNQ4P56696 695 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms