RNA–Protein interactions for RNA: ENST00000482967.5

CDK5RAP1-213, Transcript of CDK5 regulatory subunit associated protein 1, human

TSL 3

Gene CDK5RAP1, Length 840 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP1-213	ENST00000482967	CDCA5	Q96FF9	252 aa		11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CSRNP1	Q96S65	589 aa		11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	PNN	Q9H307	717 aa	Known RBP	11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	BABAM1	Q9NWV8	329 aa		11.24	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	HDGFL1	Q5TGJ6	251 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RASAL3	Q86YV0	1011 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CCDC146	Q8IYE0	955 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	PLBD2	Q8NHP8	589 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CCDC102A	Q96A19	550 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	EYA3	Q99504	573 aa		11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SCAF8	Q9UPN6	1271 aa	Known RBP	11.23	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CHL1	O00533	1208 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	UFL1	O94874	794 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	VIL1	P09327	827 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	LMOD3	Q0VAK6	560 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SCN9A	Q15858	1988 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ANGEL2	Q5VTE6	544 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	CTU1	Q7Z7A3	348 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SULF1	Q8IWU6	871 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SEC31B	Q9NQW1	1179 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	PCDH10	Q9P2E7	1040 aa		11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	LAS1L	Q9Y4W2	734 aa	Known RBP	11.22	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	IRS4	O14654	1257 aa	Predicted RBP	11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	RPS8	P62241	208 aa	Known RBP	11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	SCARF1	Q14162	830 aa		11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	NEUROD2	Q15784	382 aa		11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ANKRD13D	Q6ZTN6	518 aa		11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	MOB2	Q70IA6	237 aa		11.21	□□□□□ -0.61
CDK5RAP1-213	ENST00000482967	ZNF280A	P59817	542 aa	Predicted RBP	11.2	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PODXL2	Q9NZ53	605 aa		11.2	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	TRIM35	Q9UPQ4	493 aa		11.2	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	ZNF609	O15014	1411 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PAPPA2	Q9BXP8	1791 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	RSBN1L	Q6PCB5	846 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	JARID2	Q92833	1246 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	CCDC85A	Q96PX6	553 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	GML	Q99445	158 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	ZC3H12C	Q9C0D7	883 aa	Known RBP	11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	ANKIB1	Q9P2G1	1089 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	DBF4	Q9UBU7	674 aa	Predicted RBP	11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	GGA1	Q9UJY5	639 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	HPS5	Q9UPZ3	1129 aa		11.19	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	POLR2A	P24928	1970 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	WTIP	A6NIX2	430 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	HOXB7	P09629	217 aa		11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	TRIM28	Q13263	835 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PRPF38B	Q5VTL8	546 aa	Known RBP	11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PRAMEF18	Q5VWM3	479 aa		11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	DUSP27	Q5VZP5	1158 aa		11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	ZBTB38	Q8NAP3	1195 aa	Predicted RBP	11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	AGBL3	Q8NEM8	1001 aa		11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	MYOZ2	Q9NPC6	264 aa		11.18	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967		G3V3G9	751 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	UBE2Q2L	H0YL09	131 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	TBC1D8	O95759	1140 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	DCAF8	Q5TAQ9	597 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	ZNF296	Q8WUU4	475 aa	Predicted RBP	11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	MYD88	Q99836	296 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	MXD3	Q9BW11	206 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PHAX	Q9H814	394 aa	Known RBP	11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	HYPK	Q9NX55	129 aa		11.17	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	USP17L8	P0C7I0	530 aa		11.16	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	FKBP1B	P68106	108 aa		11.16	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	MKRN3	Q13064	507 aa	Known RBP	11.16	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	RIC3	Q7Z5B4	369 aa		11.16	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	MBIP	Q9NS73	344 aa		11.16	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	XDH	P47989	1333 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PITPNM2	Q9BZ72	1349 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	PCCA	P05165	728 aa	Predicted RBP	11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	GOLGA2	Q08379	1002 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	NBPF9	Q3BBW0	867 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	CCDC152	Q4G0S7	254 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	R3HDML	Q9H3Y0	253 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	HDAC9	Q9UKV0	1011 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	AKAP11	Q9UKA4	1901 aa		11.15	□□□□□ -0.62
CDK5RAP1-213	ENST00000482967	HTT	P42858	3142 aa		11.15	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	USP17L3	A6NCW0	530 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	USP17L4	A6NCW7	530 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	SASH1	O94885	1247 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	TTLL12	Q14166	644 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	RALBP1	Q15311	655 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	USP17L1	Q7RTZ2	530 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	REM2	Q8IYK8	340 aa	Predicted RBP	11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	RUNDC1	Q96C34	613 aa		11.14	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	GPR25	O00155	361 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	ELL2	O00472	640 aa	Predicted RBP	11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	PDE8A	O60658	829 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	ATP2B4	P23634	1241 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	DACT2	Q5SW24	774 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	ANKRD18A	Q8IVF6	992 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	FBXW7	Q969H0	707 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	MED23	Q9ULK4	1368 aa		11.13	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	MYBBP1A	Q9BQG0	1328 aa	Known RBP	11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	PSME4	Q14997	1843 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	WNT10B	O00744	389 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	ZNF853	P0CG23	659 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	KLRK1	P26718	216 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	CTSW	P56202	376 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	PRKG1	Q13976	671 aa		11.12	□□□□□ -0.63
CDK5RAP1-213	ENST00000482967	PKN2	Q16513	984 aa	Known RBP	11.12	□□□□□ -0.63

Retrieved 100 of 20,778 RNA–protein pairs in 74 ms