RNA–Protein interactions for RNA: ENST00000482645.1

TRAPPC12-220, Transcript of trafficking protein particle complex 12, humanhuman

TSL 2

Gene TRAPPC12, Length 1,538 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-220ENST00000482645 SOGA3Q5TF21 947 aa24.75■■□□□ 1.55
TRAPPC12-220ENST00000482645 PCDHB15Q9Y5E8 787 aa24.75■■□□□ 1.55
TRAPPC12-220ENST00000482645 POLA2Q14181 598 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 ARHGAP27Q6ZUM4 889 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 SIRT2Q8IXJ6 389 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 SSH3Q8TE77 659 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 ANKIB1Q9P2G1 1089 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 MINPP1Q9UNW1 487 aa24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 NSFL1CQ9UNZ2 370 aaKnown RBP24.74■■□□□ 1.55
TRAPPC12-220ENST00000482645 LRRC37AA6NMS7 1700 aa24.73■■□□□ 1.55
TRAPPC12-220ENST00000482645 DCAF8L1A6NGE4 600 aa24.73■■□□□ 1.55
TRAPPC12-220ENST00000482645 HMMRO75330 724 aa24.73■■□□□ 1.55
TRAPPC12-220ENST00000482645 CCDC136Q96JN2 1154 aa24.73■■□□□ 1.55
TRAPPC12-220ENST00000482645 COPRSQ9NQ92 184 aa24.73■■□□□ 1.55
TRAPPC12-220ENST00000482645 GPSM2P81274 684 aa24.72■■□□□ 1.55
TRAPPC12-220ENST00000482645 CHRNDQ07001 517 aa24.72■■□□□ 1.55
TRAPPC12-220ENST00000482645 B4GALNT3Q6L9W6 998 aa24.72■■□□□ 1.55
TRAPPC12-220ENST00000482645 HELBQ8NG08 1087 aaPredicted RBP24.72■■□□□ 1.55
TRAPPC12-220ENST00000482645 EYA2O00167 538 aa24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 CC2D2BQ6DHV5 1058 aa24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 DPP8Q6V1X1 898 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 MPNDQ8N594 471 aa24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 SURF6O75683 361 aaKnown RBP24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 OS9Q13438 667 aaPredicted RBP24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 METTL24Q5JXM2 366 aa24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 RTKN2Q8IZC4 609 aa24.71■■□□□ 1.55
TRAPPC12-220ENST00000482645 TAF5LO75529 589 aa24.7■■□□□ 1.54
TRAPPC12-220ENST00000482645 RASSF7Q02833 373 aa24.7■■□□□ 1.54
TRAPPC12-220ENST00000482645 RIPOR2Q9Y4F9 1068 aa24.7■■□□□ 1.54
TRAPPC12-220ENST00000482645 XDHP47989 1333 aa24.69■■□□□ 1.54
TRAPPC12-220ENST00000482645 GRIN3BO60391 1043 aa24.69■■□□□ 1.54
TRAPPC12-220ENST00000482645 G3BP1Q13283 466 aaKnown RBP eCLIP24.69■■□□□ 1.54
TRAPPC12-220ENST00000482645 MROH5Q6ZUA9 1318 aa24.68■■□□□ 1.54
TRAPPC12-220ENST00000482645 ATG9AQ7Z3C6 839 aa24.68■■□□□ 1.54
TRAPPC12-220ENST00000482645 ANKRD2Q9GZV1 360 aa24.68■■□□□ 1.54
TRAPPC12-220ENST00000482645 TAOK3Q9H2K8 898 aa24.68■■□□□ 1.54
TRAPPC12-220ENST00000482645 EXOC6BQ9Y2D4 811 aa24.68■■□□□ 1.54
TRAPPC12-220ENST00000482645 FER1L6Q2WGJ9 1857 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 C6orf229H3BNL8 230 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 NFKBIEO00221 500 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 CIAO1O76071 339 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 UFL1O94874 794 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 KCNJ4P48050 445 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 GGA1Q9UJY5 639 aa24.67■■□□□ 1.54
TRAPPC12-220ENST00000482645 APBB1O00213 710 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 IL15P40933 162 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 GPR101Q96P66 508 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 FBXO3Q9UK99 471 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 SNED1Q8TER0 1413 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 A0A1B0GUL6 1792 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 WTIPA6NIX2 430 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 SNAP23O00161 211 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 FKBP4Q02790 459 aaKnown RBP eCLIP24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 GRIPAP1Q4V328 841 aa24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 ZNF277Q9NRM2 450 aaPredicted RBP24.66■■□□□ 1.54
TRAPPC12-220ENST00000482645 TBC1D16Q8TBP0 767 aa24.65■■□□□ 1.54
TRAPPC12-220ENST00000482645 BCL11AQ9H165 835 aa24.65■■□□□ 1.54
TRAPPC12-220ENST00000482645 PODXL2Q9NZ53 605 aa24.65■■□□□ 1.54
TRAPPC12-220ENST00000482645 POLLQ9UGP5 575 aa24.65■■□□□ 1.54
TRAPPC12-220ENST00000482645 DUOX1Q9NRD9 1551 aa24.64■■□□□ 1.54
TRAPPC12-220ENST00000482645 PSMD1Q99460 953 aa24.64■■□□□ 1.53
TRAPPC12-220ENST00000482645 CEP126Q9P2H0 1117 aa24.64■■□□□ 1.53
TRAPPC12-220ENST00000482645 LTBP1Q14766 1721 aa24.64■■□□□ 1.53
TRAPPC12-220ENST00000482645 ATP2B4P23634 1241 aa24.63■■□□□ 1.53
TRAPPC12-220ENST00000482645 TFCP2Q12800 502 aa24.63■■□□□ 1.53
TRAPPC12-220ENST00000482645 NOP58Q9Y2X3 529 aaKnown RBP24.63■■□□□ 1.53
TRAPPC12-220ENST00000482645 ZNF804BA4D1E1 1349 aa24.63■■□□□ 1.53
TRAPPC12-220ENST00000482645 PDE8BO95263 885 aa24.62■■□□□ 1.53
TRAPPC12-220ENST00000482645 SUPT20HQ8NEM7 779 aa24.62■■□□□ 1.53
TRAPPC12-220ENST00000482645 RWDD1Q9H446 243 aaPredicted RBP24.62■■□□□ 1.53
TRAPPC12-220ENST00000482645 RIMBP2O15034 1052 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 IGHDP01880 384 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 HDAC1Q13547 482 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 VGLL2Q8N8G2 317 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 LEMD3Q9Y2U8 911 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 SASH1O94885 1247 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 AOC3Q16853 763 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 WASHC4Q2M389 1173 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 HSP90AB4PQ58FF6 505 aa24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 RTFDC1Q9BY42 306 aaPredicted RBP24.61■■□□□ 1.53
TRAPPC12-220ENST00000482645 LTBP3Q9NS15 1303 aa24.6■■□□□ 1.53
TRAPPC12-220ENST00000482645 PPIP5K2O43314 1243 aa24.6■■□□□ 1.53
TRAPPC12-220ENST00000482645 EYA3Q99504 573 aa24.6■■□□□ 1.53
TRAPPC12-220ENST00000482645 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP24.6■■□□□ 1.53
TRAPPC12-220ENST00000482645 KLRK1P26718 216 aa24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 IARSP41252 1262 aaKnown RBP24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 PUM3Q15397 648 aaKnown RBP24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 CCDC88AQ3V6T2 1871 aa24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 ERC1Q8IUD2 1116 aa24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 KDM2BQ8NHM5 1336 aa24.59■■□□□ 1.53
TRAPPC12-220ENST00000482645 PRELPP51888 382 aa24.58■■□□□ 1.53
TRAPPC12-220ENST00000482645 ATP2B3Q16720 1220 aa24.58■■□□□ 1.53
TRAPPC12-220ENST00000482645 LARGE2Q8N3Y3 721 aa24.58■■□□□ 1.53
TRAPPC12-220ENST00000482645 ZC3H12CQ9C0D7 883 aaKnown RBP24.58■■□□□ 1.53
TRAPPC12-220ENST00000482645 LMNB1P20700 586 aa24.57■■□□□ 1.52
TRAPPC12-220ENST00000482645 UBE4AQ14139 1066 aa24.57■■□□□ 1.52
TRAPPC12-220ENST00000482645 DCTPP1Q9H773 170 aa24.57■■□□□ 1.52
TRAPPC12-220ENST00000482645 RNF181Q9P0P0 153 aa24.57■■□□□ 1.52
TRAPPC12-220ENST00000482645 CENPQQ7L2Z9 268 aaPredicted RBP24.56■■□□□ 1.52
TRAPPC12-220ENST00000482645 RHPN1Q8TCX5 695 aa24.56■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms