RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 HNRNPUQ00839 825 aaKnown RBP eCLIP20.97■□□□□ 0.95
VAMP4-204ENST00000482519 DOK7Q18PE1 504 aa20.97■□□□□ 0.95
VAMP4-204ENST00000482519 DBNDD1Q9H9R9 158 aa20.97■□□□□ 0.95
VAMP4-204ENST00000482519 GGA1Q9UJY5 639 aa20.97■□□□□ 0.95
VAMP4-204ENST00000482519 G3V3G9 751 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 ALDH1L2Q3SY69 923 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 DCAF8Q5TAQ9 597 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 CIAPIN1Q6FI81 312 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 CHADLQ6NUI6 762 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 ZC3H12CQ9C0D7 883 aaKnown RBP20.96■□□□□ 0.95
VAMP4-204ENST00000482519 PODXL2Q9NZ53 605 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 PTPRCP08575 1304 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 RTL9Q8NET4 1388 aa20.96■□□□□ 0.95
VAMP4-204ENST00000482519 CEP350Q5VT06 3117 aa20.95■□□□□ 0.95
VAMP4-204ENST00000482519 CSF1RP07333 972 aa20.95■□□□□ 0.94
VAMP4-204ENST00000482519 FOXO4P98177 505 aa20.95■□□□□ 0.94
VAMP4-204ENST00000482519 MPHOSPH8Q99549 860 aa20.95■□□□□ 0.94
VAMP4-204ENST00000482519 BSDC1Q9NW68 430 aaPredicted RBP20.95■□□□□ 0.94
VAMP4-204ENST00000482519 XDHP47989 1333 aa20.95■□□□□ 0.94
VAMP4-204ENST00000482519 YDJCA8MPS7 323 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 EPS15P42566 896 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 SCNN1DP51172 638 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 HTRA3P83110 453 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 TNIP1Q15025 636 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 LDHDQ86WU2 507 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 MINPP1Q9UNW1 487 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 LTBP1Q14766 1721 aa20.94■□□□□ 0.94
VAMP4-204ENST00000482519 ANKRD18BA2A2Z9 1011 aa20.93■□□□□ 0.94
VAMP4-204ENST00000482519 ECE2O60344 883 aa20.93■□□□□ 0.94
VAMP4-204ENST00000482519 CT47B1P0C2W7 299 aaPredicted RBP20.93■□□□□ 0.94
VAMP4-204ENST00000482519 GMPSP49915 693 aaPredicted RBP20.93■□□□□ 0.94
VAMP4-204ENST00000482519 IFIT5Q13325 482 aaKnown RBP20.93■□□□□ 0.94
VAMP4-204ENST00000482519 LMBR1LQ6UX01 489 aa20.93■□□□□ 0.94
VAMP4-204ENST00000482519 PNMA8AQ86V59 439 aaPredicted RBP20.93■□□□□ 0.94
VAMP4-204ENST00000482519 ATP2B4P23634 1241 aa20.92■□□□□ 0.94
VAMP4-204ENST00000482519 EPHA10Q5JZY3 1008 aa20.92■□□□□ 0.94
VAMP4-204ENST00000482519 WTIPA6NIX2 430 aaPredicted RBP20.91■□□□□ 0.94
VAMP4-204ENST00000482519 NBPF7P0C2Y1 421 aaPredicted RBP20.91■□□□□ 0.94
VAMP4-204ENST00000482519 KCNQ5Q9NR82 932 aa20.91■□□□□ 0.94
VAMP4-204ENST00000482519 GPRC5DQ9NZD1 345 aa20.91■□□□□ 0.94
VAMP4-204ENST00000482519 NOB1Q9ULX3 412 aaKnown RBP20.91■□□□□ 0.94
VAMP4-204ENST00000482519 CCDC57Q2TAC2 916 aa20.9■□□□□ 0.94
VAMP4-204ENST00000482519 TAF7LQ5H9L4 462 aa20.9■□□□□ 0.94
VAMP4-204ENST00000482519 PSMD14O00487 310 aa20.89■□□□□ 0.93
VAMP4-204ENST00000482519 CCT4P50991 539 aaKnown RBP20.89■□□□□ 0.93
VAMP4-204ENST00000482519 MAP1SQ66K74 1059 aaPredicted RBP20.89■□□□□ 0.93
VAMP4-204ENST00000482519 SUCLG2Q96I99 432 aa20.89■□□□□ 0.93
VAMP4-204ENST00000482519 ZBTB12Q9Y330 459 aaPredicted RBP20.89■□□□□ 0.93
VAMP4-204ENST00000482519 ZNF594Q96JF6 807 aaPredicted RBP20.88■□□□□ 0.93
VAMP4-204ENST00000482519 ANKRD2Q9GZV1 360 aa20.88■□□□□ 0.93
VAMP4-204ENST00000482519 KCNJ4P48050 445 aa20.87■□□□□ 0.93
VAMP4-204ENST00000482519 RARSP54136 660 aaKnown RBP20.87■□□□□ 0.93
VAMP4-204ENST00000482519 CHRNDQ07001 517 aa20.87■□□□□ 0.93
VAMP4-204ENST00000482519 USP50Q70EL3 339 aaPredicted RBP20.87■□□□□ 0.93
VAMP4-204ENST00000482519 ADARB2Q9NS39 739 aaKnown RBP20.87■□□□□ 0.93
VAMP4-204ENST00000482519 HELBQ8NG08 1087 aaPredicted RBP20.86■□□□□ 0.93
VAMP4-204ENST00000482519 CNOT7Q9UIV1 285 aaKnown RBP20.86■□□□□ 0.93
VAMP4-204ENST00000482519 ZNF804BA4D1E1 1349 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 UTYO14607 1347 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 SHTN1A0MZ66 631 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 H7C1D1 291 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 TAF5LO75529 589 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 MICALL2Q8IY33 904 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 CNTROBQ8N137 903 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 KAZALD1Q96I82 304 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 API5Q9BZZ5 524 aaKnown RBP20.85■□□□□ 0.93
VAMP4-204ENST00000482519 BICC1Q9H694 974 aaKnown RBP20.85■□□□□ 0.93
VAMP4-204ENST00000482519 CNNM1Q9NRU3 951 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 LEMD3Q9Y2U8 911 aa20.85■□□□□ 0.93
VAMP4-204ENST00000482519 PLIN1O60240 522 aa20.84■□□□□ 0.93
VAMP4-204ENST00000482519 LDHAL6AQ6ZMR3 332 aa20.84■□□□□ 0.93
VAMP4-204ENST00000482519 USP44Q9H0E7 712 aa20.84■□□□□ 0.93
VAMP4-204ENST00000482519 ADAMTSL1Q8N6G6 1762 aa20.84■□□□□ 0.93
VAMP4-204ENST00000482519 MED23Q9ULK4 1368 aa20.84■□□□□ 0.93
VAMP4-204ENST00000482519 SCN9AQ15858 1988 aa20.83■□□□□ 0.93
VAMP4-204ENST00000482519 ITGBL1O95965 494 aaPredicted RBP20.83■□□□□ 0.93
VAMP4-204ENST00000482519 DNAJC5GQ8N7S2 189 aa20.83■□□□□ 0.93
VAMP4-204ENST00000482519 FBXW7Q969H0 707 aa20.83■□□□□ 0.93
VAMP4-204ENST00000482519 KLRK1P26718 216 aa20.82■□□□□ 0.92
VAMP4-204ENST00000482519 BRPF1P55201 1214 aaPredicted RBP20.82■□□□□ 0.92
VAMP4-204ENST00000482519 TXNRD3Q86VQ6 643 aa20.82■□□□□ 0.92
VAMP4-204ENST00000482519 DPF2Q92785 391 aa20.82■□□□□ 0.92
VAMP4-204ENST00000482519 FRAT1Q92837 279 aaPredicted RBP20.82■□□□□ 0.92
VAMP4-204ENST00000482519 SNAP23O00161 211 aa20.81■□□□□ 0.92
VAMP4-204ENST00000482519 BCAR3O75815 825 aa20.81■□□□□ 0.92
VAMP4-204ENST00000482519 VIL1P09327 827 aaKnown RBP20.81■□□□□ 0.92
VAMP4-204ENST00000482519 RPS12P25398 132 aaKnown RBP20.81■□□□□ 0.92
VAMP4-204ENST00000482519 RBM26Q5T8P6 1007 aaKnown RBP20.81■□□□□ 0.92
VAMP4-204ENST00000482519 SAMD7Q7Z3H4 446 aa20.81■□□□□ 0.92
VAMP4-204ENST00000482519 PODNQ7Z5L7 613 aa20.81■□□□□ 0.92
VAMP4-204ENST00000482519 ANKRD44Q8N8A2 993 aa20.81■□□□□ 0.92
VAMP4-204ENST00000482519 KIF16BQ96L93 1317 aa20.8■□□□□ 0.92
VAMP4-204ENST00000482519 PASKQ96RG2 1323 aa20.8■□□□□ 0.92
VAMP4-204ENST00000482519 TBC1D10BQ4KMP7 808 aaPredicted RBP20.8■□□□□ 0.92
VAMP4-204ENST00000482519 TRPM4Q8TD43 1214 aa20.8■□□□□ 0.92
VAMP4-204ENST00000482519 COA1Q9GZY4 146 aa20.8■□□□□ 0.92
VAMP4-204ENST00000482519 USP17L3A6NCW0 530 aa20.79■□□□□ 0.92
VAMP4-204ENST00000482519 USP17L4A6NCW7 530 aa20.79■□□□□ 0.92
VAMP4-204ENST00000482519 HIRAP54198 1017 aaPredicted RBP20.79■□□□□ 0.92
VAMP4-204ENST00000482519 RABL6Q3YEC7 729 aaPredicted RBP20.79■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms