RNA–Protein interactions for RNA: ENST00000482217.1

VPS41-212, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 951 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-212ENST00000482217 ELOA3CA0A087WX78 387 aaPredicted RBP5.97□□□□□ -1.45
VPS41-212ENST00000482217 LOC100996750A0A140TA64 210 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 ELOA3DA6NLF2 546 aaPredicted RBP5.97□□□□□ -1.45
VPS41-212ENST00000482217 ADARB2-AS1A8MUL3 147 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 ALAS2P22557 587 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 PCBP4P57723 403 aaKnown RBP5.97□□□□□ -1.45
VPS41-212ENST00000482217 ELOA3BQ3SY89 546 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 EAPPQ56P03 285 aaPredicted RBP5.97□□□□□ -1.45
VPS41-212ENST00000482217 FBXO33Q7Z6M2 555 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 FCHSD1Q86WN1 690 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 ELOA3Q8NG57 546 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 SNX29Q8TEQ0 813 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 TNFRSF25Q93038 417 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 KRTAP4-6Q9BYQ5 205 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 GSX2Q9BZM3 304 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 NIF3L1Q9GZT8 377 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 DNAJC25Q9H1X3 360 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 ELP3Q9H9T3 547 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 RRAGCQ9HB90 399 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 BCCIPQ9P287 314 aaKnown RBP eCLIP5.97□□□□□ -1.45
VPS41-212ENST00000482217 KLF15Q9UIH9 416 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 CNTNAP5Q8WYK1 1306 aa5.97□□□□□ -1.45
VPS41-212ENST00000482217 TNFRSF21O75509 655 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 P4HBP07237 508 aaKnown RBP5.96□□□□□ -1.46
VPS41-212ENST00000482217 ZNF326Q5BKZ1 582 aaKnown RBP5.96□□□□□ -1.46
VPS41-212ENST00000482217 CHSY3Q70JA7 882 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 PMEPA1Q969W9 287 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 SLC30A3Q99726 388 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 MDFIQ99750 246 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 IGSF5Q9NSI5 407 aa5.96□□□□□ -1.46
VPS41-212ENST00000482217 A6NHS1 94 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 GNB5O14775 395 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 MAPK8P45983 427 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 DGKGP49619 791 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 ATP2B2Q01814 1243 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 ENOX2Q16206 610 aaKnown RBP5.95□□□□□ -1.46
VPS41-212ENST00000482217 PNMA5Q96PV4 448 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 CSRNP1Q96S65 589 aa5.95□□□□□ -1.46
VPS41-212ENST00000482217 ABI2Q9NYB9 513 aaPredicted RBP5.95□□□□□ -1.46
VPS41-212ENST00000482217 NOP53Q9NZM5 478 aaKnown RBP5.95□□□□□ -1.46
VPS41-212ENST00000482217 GTF3C5Q9Y5Q8 519 aaPredicted RBP5.95□□□□□ -1.46
VPS41-212ENST00000482217 EIF1AYO14602 144 aaKnown RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 CPNE3O75131 537 aaKnown RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 PHACTR2O75167 634 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 SASH3O75995 380 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 MAP3K6O95382 1288 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 ZNF16P17020 682 aaPredicted RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 HOXB4P17483 251 aaPredicted RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 SNRPNP63162 240 aaKnown RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 TTC39BQ5VTQ0 682 aaPredicted RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 ALG1LQ6GMV1 187 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 FBF1Q8TES7 1133 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 GIPC2Q8TF65 315 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 TMEM63CQ9P1W3 806 aa5.94□□□□□ -1.46
VPS41-212ENST00000482217 ARID4BQ4LE39 1312 aaPredicted RBP5.94□□□□□ -1.46
VPS41-212ENST00000482217 CADPSQ9ULU8 1353 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 PNMA6FA0A0J9YX94 578 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 PRPF40AO75400 957 aaKnown RBP5.93□□□□□ -1.46
VPS41-212ENST00000482217 IGHA1P01876 353 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 LDHBP07195 334 aaKnown RBP5.93□□□□□ -1.46
VPS41-212ENST00000482217 RARAP10276 462 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 TARSP26639 723 aaKnown RBP5.93□□□□□ -1.46
VPS41-212ENST00000482217 SOX18P35713 384 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 ORC1Q13415 861 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 LINC00114Q6XXX2 140 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 ZFYVE28Q9HCC9 887 aa5.93□□□□□ -1.46
VPS41-212ENST00000482217 FOXD3Q9UJU5 478 aaPredicted RBP5.93□□□□□ -1.46
VPS41-212ENST00000482217 HOXD8P13378 290 aaPredicted RBP5.92□□□□□ -1.46
VPS41-212ENST00000482217 NFKB1P19838 968 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 ITGAEP38570 1179 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 ADH7P40394 386 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 GRIN2CQ14957 1233 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 PCSK7Q16549 785 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 KRT25Q7Z3Z0 450 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 OR13H1Q8NG92 308 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 BHMTQ93088 406 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 DCAF5Q96JK2 942 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 PSMD1Q99460 953 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 CHRDQ9H2X0 955 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 PRDM6Q9NQX0 595 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 TLR7Q9NYK1 1049 aaKnown RBP5.92□□□□□ -1.46
VPS41-212ENST00000482217 ZFATQ9P243 1243 aa5.92□□□□□ -1.46
VPS41-212ENST00000482217 SPDYE3A6NKU9 549 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 MMP20O60882 483 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 PSAPP07602 524 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 CES1P23141 567 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 C1orf127Q8N9H9 656 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 PRDM16Q9HAZ2 1276 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 CNTN3Q9P232 1028 aa5.91□□□□□ -1.46
VPS41-212ENST00000482217 SMARCA5O60264 1052 aaPredicted RBP5.9□□□□□ -1.46
VPS41-212ENST00000482217 PLAURQ03405 335 aa5.9□□□□□ -1.46
VPS41-212ENST00000482217 RAB44Q7Z6P3 723 aaPredicted RBP5.9□□□□□ -1.46
VPS41-212ENST00000482217 ZNF526Q8TF50 670 aaPredicted RBP5.9□□□□□ -1.46
VPS41-212ENST00000482217 FRMD6Q96NE9 622 aa5.9□□□□□ -1.46
VPS41-212ENST00000482217 EREGO14944 169 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 KIF4AO95239 1232 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 EDN3P14138 238 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 NRLP54845 237 aa5.89□□□□□ -1.47
VPS41-212ENST00000482217 XPCQ01831 940 aaPredicted RBP5.89□□□□□ -1.47
VPS41-212ENST00000482217 HYAL2Q12891 473 aa5.89□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 206.5 ms