RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 IL15P40933 162 aaPredicted RBP13.87□□□□□ -0.19
CLDN11-205ENST00000480067 SOGA3Q5TF21 947 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 CC2D2BQ6DHV5 1058 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 C7orf43Q8WVR3 580 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 NSFL1CQ9UNZ2 370 aaKnown RBP13.87□□□□□ -0.19
CLDN11-205ENST00000480067 NOP58Q9Y2X3 529 aaKnown RBP13.87□□□□□ -0.19
CLDN11-205ENST00000480067 RIPOR2Q9Y4F9 1068 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 MROH5Q6ZUA9 1318 aa13.87□□□□□ -0.19
CLDN11-205ENST00000480067 CHRNDQ07001 517 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 GRIPAP1Q4V328 841 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 METTL24Q5JXM2 366 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 OLFM4Q6UX06 510 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 ANKRD2Q9GZV1 360 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 CEP126Q9P2H0 1117 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 EXOC6BQ9Y2D4 811 aa13.86□□□□□ -0.19
CLDN11-205ENST00000480067 COL11A2P13942 1736 aaPredicted RBP13.86□□□□□ -0.19
CLDN11-205ENST00000480067 GPR162Q16538 588 aa13.85□□□□□ -0.19
CLDN11-205ENST00000480067 CCDC93Q567U6 631 aa13.85□□□□□ -0.19
CLDN11-205ENST00000480067 ATG9AQ7Z3C6 839 aa13.85□□□□□ -0.19
CLDN11-205ENST00000480067 RTKN2Q8IZC4 609 aa13.85□□□□□ -0.19
CLDN11-205ENST00000480067 HELBQ8NG08 1087 aaPredicted RBP13.85□□□□□ -0.19
CLDN11-205ENST00000480067 DCTPP1Q9H773 170 aa13.85□□□□□ -0.19
CLDN11-205ENST00000480067 APBB1O00213 710 aa13.84□□□□□ -0.19
CLDN11-205ENST00000480067 DPP8Q6V1X1 898 aaPredicted RBP13.84□□□□□ -0.19
CLDN11-205ENST00000480067 ERC1Q8IUD2 1116 aa13.84□□□□□ -0.19
CLDN11-205ENST00000480067 MPNDQ8N594 471 aa13.84□□□□□ -0.19
CLDN11-205ENST00000480067 RAB11FIP3O75154 756 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 TAF5LO75529 589 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 PDE8BO95263 885 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 IGHDP01880 384 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 KCNJ4P48050 445 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 GPSM2P81274 684 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 SLC51AQ86UW1 340 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 CCDC136Q96JN2 1154 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 XDHP47989 1333 aa13.83□□□□□ -0.19
CLDN11-205ENST00000480067 KIAA1551Q9HCM1 1747 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 COL4A1P02462 1669 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 C6orf229H3BNL8 230 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 GCC1Q96CN9 775 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 PODXL2Q9NZ53 605 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 GGA1Q9UJY5 639 aa13.83□□□□□ -0.2
CLDN11-205ENST00000480067 TAF1P21675 1872 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 SLX4Q8IY92 1834 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 DCAF8L1A6NGE4 600 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 SASH1O94885 1247 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 YBX3P16989 372 aaKnown RBP eCLIP13.82□□□□□ -0.2
CLDN11-205ENST00000480067 ATP2B4P23634 1241 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 TFCP2Q12800 502 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 ARHGAP27Q6ZUM4 889 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 KIF1BPQ96EK5 621 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 PPP4R2Q9NY27 417 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 AKAP2Q9Y2D5 859 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 LEMD3Q9Y2U8 911 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 DLEC1Q9Y238 1755 aa13.82□□□□□ -0.2
CLDN11-205ENST00000480067 UFL1O94874 794 aa13.81□□□□□ -0.2
CLDN11-205ENST00000480067 PUM3Q15397 648 aaKnown RBP13.81□□□□□ -0.2
CLDN11-205ENST00000480067 TBC1D16Q8TBP0 767 aa13.81□□□□□ -0.2
CLDN11-205ENST00000480067 RHPN1Q8TCX5 695 aa13.81□□□□□ -0.2
CLDN11-205ENST00000480067 LRRCC1Q9C099 1032 aa13.81□□□□□ -0.2
CLDN11-205ENST00000480067 BCL11AQ9H165 835 aa13.81□□□□□ -0.2
CLDN11-205ENST00000480067 ZBTB47Q9UFB7 747 aaPredicted RBP13.81□□□□□ -0.2
CLDN11-205ENST00000480067 ZNF804BA4D1E1 1349 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 GRIN3BO60391 1043 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 UBE4AQ14139 1066 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 VGLL2Q8N8G2 317 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 SUPT20HQ8NEM7 779 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 PSMD1Q99460 953 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 TAOK3Q9H2K8 898 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 POLLQ9UGP5 575 aa13.8□□□□□ -0.2
CLDN11-205ENST00000480067 WTIPA6NIX2 430 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 SNAP23O00161 211 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 FKBP4Q02790 459 aaKnown RBP eCLIP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 ATP2B3Q16720 1220 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 ANKRD45Q5TZF3 282 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 CLASRPQ8N2M8 674 aaKnown RBP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 LPIN2Q92539 896 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 EYA3Q99504 573 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 RTFDC1Q9BY42 306 aaPredicted RBP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 ZC3H12CQ9C0D7 883 aaKnown RBP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 IL1RAPL2Q9NP60 686 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 IFIT1P09914 478 aaKnown RBP13.79□□□□□ -0.2
CLDN11-205ENST00000480067 TIMM10P62072 90 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 WASHC4Q2M389 1173 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 B4GALNT3Q6L9W6 998 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 SMC5Q8IY18 1101 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 NEUROD6Q96NK8 337 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 GPR108Q9NPR9 543 aa13.79□□□□□ -0.2
CLDN11-205ENST00000480067 BRCA1P38398 1863 aaKnown RBP13.78□□□□□ -0.2
CLDN11-205ENST00000480067 SLC5A1P13866 664 aa13.78□□□□□ -0.2
CLDN11-205ENST00000480067 ZNF277Q9NRM2 450 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-205ENST00000480067 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.78□□□□□ -0.2
CLDN11-205ENST00000480067 A0A1B0GUL7 405 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 NFKBIEO00221 500 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 RIMBP2O15034 1052 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 SMARCA5O60264 1052 aaPredicted RBP13.77□□□□□ -0.21
CLDN11-205ENST00000480067 FGFR2P21802 821 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 TNNI3KQ59H18 835 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 CAVIN4Q5BKX8 364 aa13.77□□□□□ -0.21
CLDN11-205ENST00000480067 CENPQQ7L2Z9 268 aaPredicted RBP13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms