RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 G3BP1Q13283 466 aaKnown RBP eCLIP15.53■□□□□ 0.08
TRAPPC12-218ENST00000479897 LRRC24Q50LG9 513 aa15.53■□□□□ 0.08
TRAPPC12-218ENST00000479897 PUS3Q9BZE2 481 aaKnown RBP15.53■□□□□ 0.08
TRAPPC12-218ENST00000479897 SIL1Q9H173 461 aa15.53■□□□□ 0.08
TRAPPC12-218ENST00000479897 ZNF609O15014 1411 aa15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 PPEF1O14829 653 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 PRPF40BQ6NWY9 871 aaKnown RBP15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 TTLL6Q8N841 843 aa15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 VGLL2Q8N8G2 317 aa15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 ZNF622Q969S3 477 aaKnown RBP eCLIP15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 KIF1BPQ96EK5 621 aa15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 FHDC1Q9C0D6 1143 aaPredicted RBP15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 CNNM1Q9NRU3 951 aa15.52■□□□□ 0.08
TRAPPC12-218ENST00000479897 DUOX1Q9NRD9 1551 aa15.52■□□□□ 0.07
TRAPPC12-218ENST00000479897 FER1L6Q2WGJ9 1857 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 A0A0G2JLW4 131 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 SASH1O94885 1247 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 B4GALNT3Q6L9W6 998 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 SP8Q8IXZ3 490 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 RHPN1Q8TCX5 695 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 GPR108Q9NPR9 543 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 PIM2Q9P1W9 311 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 PPP1R1BQ9UD71 204 aaPredicted RBP15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 MINPP1Q9UNW1 487 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 ATP6V0A2Q9Y487 856 aa15.51■□□□□ 0.07
TRAPPC12-218ENST00000479897 CHRNDQ07001 517 aa15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 OS9Q13438 667 aaPredicted RBP15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 CC2D2BQ6DHV5 1058 aa15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 NLGN2Q8NFZ4 835 aa15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 C7orf43Q8WVR3 580 aa15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 LRRCC1Q9C099 1032 aa15.5■□□□□ 0.07
TRAPPC12-218ENST00000479897 NUCB1Q02818 461 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 GRIPAP1Q4V328 841 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 METTL24Q5JXM2 366 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 KLHL34Q8N239 644 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 SYT17Q9BSW7 474 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 ANKRD2Q9GZV1 360 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 PODXL2Q9NZ53 605 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 CEP126Q9P2H0 1117 aa15.49■□□□□ 0.07
TRAPPC12-218ENST00000479897 XDHP47989 1333 aa15.48■□□□□ 0.07
TRAPPC12-218ENST00000479897 PDE8BO95263 885 aa15.48■□□□□ 0.07
TRAPPC12-218ENST00000479897 DALRD3Q5D0E6 543 aaKnown RBP15.48■□□□□ 0.07
TRAPPC12-218ENST00000479897 SOGA3Q5TF21 947 aa15.48■□□□□ 0.07
TRAPPC12-218ENST00000479897 FGFR2P21802 821 aa15.47■□□□□ 0.07
TRAPPC12-218ENST00000479897 TFCP2Q12800 502 aa15.47■□□□□ 0.07
TRAPPC12-218ENST00000479897 AKAP2Q9Y2D5 859 aa15.47■□□□□ 0.07
TRAPPC12-218ENST00000479897 UBE4AQ14139 1066 aa15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 PUM3Q15397 648 aaKnown RBP15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 TNNI3KQ59H18 835 aa15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 CHD1LQ86WJ1 897 aa15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 CLASRPQ8N2M8 674 aaKnown RBP15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 LEMD3Q9Y2U8 911 aa15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 FPGT-TNNI3KV9GXZ4 949 aa15.46■□□□□ 0.07
TRAPPC12-218ENST00000479897 CCDC93Q567U6 631 aa15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 ANKRD45Q5TZF3 282 aa15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 SLC51AQ86UW1 340 aa15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 LPIN2Q92539 896 aa15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 RTFDC1Q9BY42 306 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 TMX4Q9H1E5 349 aaPredicted RBP15.45■□□□□ 0.06
TRAPPC12-218ENST00000479897 SALL3Q9BXA9 1300 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 IRS2Q9Y4H2 1338 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 ATP2B4P23634 1241 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 GPSM2P81274 684 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 ATP2B3Q16720 1220 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 C15orf52Q6ZUT6 534 aaKnown RBP15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 IL1RAPL2Q9NP60 686 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 ZBTB47Q9UFB7 747 aaPredicted RBP15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 MYH13Q9UKX3 1938 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 MED23Q9ULK4 1368 aa15.44■□□□□ 0.06
TRAPPC12-218ENST00000479897 A0A1B0GUL7 405 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 APBB1O00213 710 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 ZBTB22O15209 634 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 C21orf2O43822 256 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 TAF5LO75529 589 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 RTKN2Q8IZC4 609 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 MPNDQ8N594 471 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 HELBQ8NG08 1087 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 EAF2Q96CJ1 260 aaPredicted RBP15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 PSMD1Q99460 953 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 ANKIB1Q9P2G1 1089 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 GGA1Q9UJY5 639 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 ZNF804BA4D1E1 1349 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 LTBP3Q9NS15 1303 aa15.43■□□□□ 0.06
TRAPPC12-218ENST00000479897 SMARCA5O60264 1052 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 IFIT1P09914 478 aaKnown RBP15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 SLC5A1P13866 664 aa15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 OLFM4Q6UX06 510 aa15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 DPP8Q6V1X1 898 aaPredicted RBP15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 TBC1D16Q8TBP0 767 aa15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 LNPKQ9C0E8 428 aa15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 NSFL1CQ9UNZ2 370 aaKnown RBP15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 BCS1LQ9Y276 419 aa15.42■□□□□ 0.06
TRAPPC12-218ENST00000479897 PSME4Q14997 1843 aa15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 UFL1O94874 794 aa15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 AACSQ86V21 672 aa15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 SUPT20HQ8NEM7 779 aa15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 POLLQ9UGP5 575 aa15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 DBNLQ9UJU6 430 aaKnown RBP15.41■□□□□ 0.06
TRAPPC12-218ENST00000479897 AKAP11Q9UKA4 1901 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 98.2 ms