RNA–Protein interactions for RNA: ENST00000475560.5

SRGAP3-205, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 703 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-205ENST00000475560 CD2BP2O95400 341 aaKnown RBP6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 RLBP1P12271 317 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 GTF2E1P29083 439 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 INPP5BP32019 993 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 ARSDP51689 593 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 GYS2P54840 703 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 TRIP4Q15650 581 aaPredicted RBP6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 HSP90AB2PQ58FF8 381 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 ARSHQ5FYA8 562 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 FBXL19Q6PCT2 694 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 C1orf127Q8N9H9 656 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 ANKLE1Q8NAG6 615 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 C3orf58Q8NDZ4 430 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 TRPM4Q8TD43 1214 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 ANAPC16Q96DE5 110 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 KCNQ5Q9NR82 932 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 FAN1Q9Y2M0 1017 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 KCNMB2Q9Y691 235 aa6.96□□□□□ -1.3
SRGAP3-205ENST00000475560 EREGO14944 169 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 TPD52L2O43399 206 aaKnown RBP6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 GREM1O60565 184 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 MAP4K4O95819 1239 aaPredicted RBP6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 KIAA0319Q5VV43 1072 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 GLIS3Q8NEA6 775 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 ANKRD24Q8TF21 1146 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 PMEPA1Q969W9 287 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 KLRG1Q96E93 195 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 PSMD1Q99460 953 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 DNAJC7Q99615 494 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 CHRDQ9H2X0 955 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 CNTN3Q9P232 1028 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 MSRB2Q9Y3D2 182 aa6.95□□□□□ -1.3
SRGAP3-205ENST00000475560 ESYT3A0FGR9 886 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 CCDC85CA6NKD9 419 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 GARTP22102 1010 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 GGCXP38435 758 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 CTC1Q2NKJ3 1217 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 PCNX4Q63HM2 1172 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 NBPF10Q6P3W6 841 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 Q6ZVU0 165 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 KIAA0907Q7Z7F0 614 aaPredicted RBP6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 HOMER1Q86YM7 354 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 AIDAQ96BJ3 306 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 SRRTQ9BXP5 876 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 MYH16Q9H6N6 1097 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 ANKIB1Q9P2G1 1089 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 G3BP2Q9UN86 482 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 TRAK1Q9UPV9 953 aa6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 SUPT16HQ9Y5B9 1047 aaKnown RBP6.94□□□□□ -1.3
SRGAP3-205ENST00000475560 SMAD7O15105 426 aaKnown RBP6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 PLA2G4AP47712 749 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 GNASQ5JWF2 1037 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 SV2BQ7L1I2 683 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 NKD1Q969G9 470 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 SHDQ96IW2 340 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 RHOVQ96L33 236 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 GRIP2Q9C0E4 1043 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 EHD4Q9H223 541 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 ZDHHC3Q9NYG2 299 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 UBP1Q9NZI7 540 aa6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 GPC6Q9Y625 555 aaPredicted RBP6.93□□□□□ -1.3
SRGAP3-205ENST00000475560 A0A1W2PP55 124 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 PF4P02776 101 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 S100BP04271 92 aaPredicted RBP6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 PDGFRBP09619 1106 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 MASP1P48740 699 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 FAM160A1Q05DH4 1040 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 MAP3K11Q16584 847 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 NBPF1Q3BBV0 1214 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 C4orf17Q53FE4 359 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 TNNI3KQ59H18 835 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 BTLAQ7Z6A9 289 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 CELF2-AS1Q8N7Q2 184 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 PHC3Q8NDX5 983 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 HSH2DQ96JZ2 352 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 AGBL1Q96MI9 1066 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 TMEM260Q9NX78 707 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 PPM1HQ9ULR3 514 aa6.92□□□□□ -1.3
SRGAP3-205ENST00000475560 CES1P23141 567 aa6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 FCGRTP55899 365 aa6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 EMID1Q96A84 441 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 ZNF395Q9H8N7 513 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 TYW1Q9NV66 732 aaKnown RBP6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 ABI2Q9NYB9 513 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 MAGEC2Q9UBF1 373 aaPredicted RBP6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 TLR6Q9Y2C9 796 aa6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 AKAP2Q9Y2D5 859 aa6.91□□□□□ -1.3
SRGAP3-205ENST00000475560 CCDC194A0A1B0GVG4 234 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 PDPK1O15530 556 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 TATP17735 454 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 VEGFBP49765 207 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 RELBQ01201 579 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 APOBRQ0VD83 1088 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 CAMK2GQ13555 558 aaPredicted RBP6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 PRPF40BQ6NWY9 871 aaKnown RBP6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 C16orf86Q6ZW13 317 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 SLITRK4Q8IW52 837 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 GOLM1Q8NBJ4 401 aa6.9□□□□□ -1.3
SRGAP3-205ENST00000475560 ST7Q9NRC1 585 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms