RNA–Protein interactions for RNA: ENST00000475378.5

RNF220-212, Transcript of ring finger protein 220, humanhuman

TSL 3

Gene RNF220, Length 916 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-212ENST00000475378 C6orf229H3BNL8 230 aa23.56■■□□□ 1.36
RNF220-212ENST00000475378 VIL1P09327 827 aaKnown RBP23.56■■□□□ 1.36
RNF220-212ENST00000475378 SULF1Q8IWU6 871 aa23.56■■□□□ 1.36
RNF220-212ENST00000475378 ZNF428Q96B54 188 aa23.56■■□□□ 1.36
RNF220-212ENST00000475378 CDCA5Q96FF9 252 aa23.56■■□□□ 1.36
RNF220-212ENST00000475378 MAPK8IP3Q9UPT6 1336 aa23.56■■□□□ 1.36
RNF220-212ENST00000475378 REM2Q8IYK8 340 aaPredicted RBP23.55■■□□□ 1.36
RNF220-212ENST00000475378 EYA3Q99504 573 aa23.55■■□□□ 1.36
RNF220-212ENST00000475378 HPS5Q9UPZ3 1129 aa23.55■■□□□ 1.36
RNF220-212ENST00000475378 ZNF609O15014 1411 aa23.55■■□□□ 1.36
RNF220-212ENST00000475378 TBC1D16Q8TBP0 767 aa23.54■■□□□ 1.36
RNF220-212ENST00000475378 ISCA1Q9BUE6 129 aa23.54■■□□□ 1.36
RNF220-212ENST00000475378 PNNQ9H307 717 aaKnown RBP23.54■■□□□ 1.36
RNF220-212ENST00000475378 FAM89AQ96GI7 184 aa23.53■■□□□ 1.36
RNF220-212ENST00000475378 ZNF280AP59817 542 aaPredicted RBP23.52■■□□□ 1.36
RNF220-212ENST00000475378 RIPK4P57078 832 aa23.51■■□□□ 1.35
RNF220-212ENST00000475378 PLBD2Q8NHP8 589 aa23.51■■□□□ 1.35
RNF220-212ENST00000475378 FKBP1BP68106 108 aa23.5■■□□□ 1.35
RNF220-212ENST00000475378 PKN2Q16513 984 aaKnown RBP23.5■■□□□ 1.35
RNF220-212ENST00000475378 ANGEL2Q5VTE6 544 aaKnown RBP23.5■■□□□ 1.35
RNF220-212ENST00000475378 PODXL2Q9NZ53 605 aa23.5■■□□□ 1.35
RNF220-212ENST00000475378 RPS8P62241 208 aaKnown RBP23.49■■□□□ 1.35
RNF220-212ENST00000475378 SCARF1Q14162 830 aa23.49■■□□□ 1.35
RNF220-212ENST00000475378 KRT24Q2M2I5 525 aa23.49■■□□□ 1.35
RNF220-212ENST00000475378 ZC3H12CQ9C0D7 883 aaKnown RBP23.49■■□□□ 1.35
RNF220-212ENST00000475378 CHPF2Q9P2E5 772 aa23.49■■□□□ 1.35
RNF220-212ENST00000475378 ATP5J2-PTCD1G3V325 749 aa23.48■■□□□ 1.35
RNF220-212ENST00000475378 ZNF296Q8WUU4 475 aaPredicted RBP23.48■■□□□ 1.35
RNF220-212ENST00000475378 ZNF646O15015 1829 aaPredicted RBP23.47■■□□□ 1.35
RNF220-212ENST00000475378 RSBN1LQ6PCB5 846 aaPredicted RBP23.47■■□□□ 1.35
RNF220-212ENST00000475378 ANKRD13DQ6ZTN6 518 aa23.47■■□□□ 1.35
RNF220-212ENST00000475378 AGBL3Q8NEM8 1001 aa23.47■■□□□ 1.35
RNF220-212ENST00000475378 PITPNM2Q9BZ72 1349 aa23.47■■□□□ 1.35
RNF220-212ENST00000475378 MKI67P46013 3256 aaKnown RBP23.46■■□□□ 1.35
RNF220-212ENST00000475378 GMLQ99445 158 aa23.46■■□□□ 1.35
RNF220-212ENST00000475378 IRS4O14654 1257 aaPredicted RBP23.45■■□□□ 1.34
RNF220-212ENST00000475378 TBC1D8O95759 1140 aa23.45■■□□□ 1.34
RNF220-212ENST00000475378 TMPOP42166 694 aaKnown RBP23.45■■□□□ 1.34
RNF220-212ENST00000475378 TRIM28Q13263 835 aaKnown RBP23.45■■□□□ 1.34
RNF220-212ENST00000475378 RTL5Q5HYW3 569 aaPredicted RBP23.45■■□□□ 1.34
RNF220-212ENST00000475378 MOB2Q70IA6 237 aa23.45■■□□□ 1.34
RNF220-212ENST00000475378 HDAC9Q9UKV0 1011 aa23.45■■□□□ 1.34
RNF220-212ENST00000475378 CHL1O00533 1208 aa23.44■■□□□ 1.34
RNF220-212ENST00000475378 UFL1O94874 794 aa23.44■■□□□ 1.34
RNF220-212ENST00000475378 LMOD3Q0VAK6 560 aa23.44■■□□□ 1.34
RNF220-212ENST00000475378 NOM1Q5C9Z4 860 aaKnown RBP23.44■■□□□ 1.34
RNF220-212ENST00000475378 SEC31BQ9NQW1 1179 aa23.44■■□□□ 1.34
RNF220-212ENST00000475378 HTTP42858 3142 aa23.43■■□□□ 1.34
RNF220-212ENST00000475378 MYOZ2Q9NPC6 264 aa23.43■■□□□ 1.34
RNF220-212ENST00000475378 GGA1Q9UJY5 639 aa23.43■■□□□ 1.34
RNF220-212ENST00000475378 TM4SF4P48230 202 aa23.42■■□□□ 1.34
RNF220-212ENST00000475378 HDGFL1Q5TGJ6 251 aa23.42■■□□□ 1.34
RNF220-212ENST00000475378 SCAF8Q9UPN6 1271 aaKnown RBP23.42■■□□□ 1.34
RNF220-212ENST00000475378 G3V3G9 751 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 UBE2Q2LH0YL09 131 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 GPR25O00155 361 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 USP17L8P0C7I0 530 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 DCAF8Q5TAQ9 597 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 FBXO46Q6PJ61 603 aaPredicted RBP23.41■■□□□ 1.34
RNF220-212ENST00000475378 ANKIB1Q9P2G1 1089 aa23.41■■□□□ 1.34
RNF220-212ENST00000475378 DBF4Q9UBU7 674 aaPredicted RBP23.41■■□□□ 1.34
RNF220-212ENST00000475378 HOXB7P09629 217 aa23.4■■□□□ 1.34
RNF220-212ENST00000475378 ZBTB38Q8NAP3 1195 aaPredicted RBP23.39■■□□□ 1.33
RNF220-212ENST00000475378 CENPFP49454 3210 aa23.39■■□□□ 1.33
RNF220-212ENST00000475378 PRAMEF18Q5VWM3 479 aa23.38■■□□□ 1.33
RNF220-212ENST00000475378 CFHR5Q9BXR6 569 aa23.38■■□□□ 1.33
RNF220-212ENST00000475378 USP17L3A6NCW0 530 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 USP17L4A6NCW7 530 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 NBPF9Q3BBW0 867 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 USP17L1Q7RTZ2 530 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 HYPKQ9NX55 129 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 LAMB1P07942 1786 aa23.37■■□□□ 1.33
RNF220-212ENST00000475378 SPEF2Q9C093 1822 aa23.36■■□□□ 1.33
RNF220-212ENST00000475378 PODNQ7Z5L7 613 aa23.36■■□□□ 1.33
RNF220-212ENST00000475378 R3HDMLQ9H3Y0 253 aa23.36■■□□□ 1.33
RNF220-212ENST00000475378 XDHP47989 1333 aa23.35■■□□□ 1.33
RNF220-212ENST00000475378 RBBP6Q7Z6E9 1792 aaKnown RBP23.35■■□□□ 1.33
RNF220-212ENST00000475378 GCC1Q96CN9 775 aa23.35■■□□□ 1.33
RNF220-212ENST00000475378 TRIM35Q9UPQ4 493 aa23.35■■□□□ 1.33
RNF220-212ENST00000475378 MYH3P11055 1940 aa23.35■■□□□ 1.33
RNF220-212ENST00000475378 BRCA2P51587 3418 aa23.34■■□□□ 1.33
RNF220-212ENST00000475378 LAS1LQ9Y4W2 734 aaKnown RBP23.34■■□□□ 1.33
RNF220-212ENST00000475378 FKTNO75072 461 aa23.33■■□□□ 1.33
RNF220-212ENST00000475378 SREBF2Q12772 1141 aa23.33■■□□□ 1.33
RNF220-212ENST00000475378 MKRN3Q13064 507 aaKnown RBP23.33■■□□□ 1.33
RNF220-212ENST00000475378 NEUROD2Q15784 382 aa23.33■■□□□ 1.33
RNF220-212ENST00000475378 CCDC152Q4G0S7 254 aa23.33■■□□□ 1.33
RNF220-212ENST00000475378 KIAA0100Q14667 2235 aaKnown RBP23.33■■□□□ 1.33
RNF220-212ENST00000475378 WTIPA6NIX2 430 aaPredicted RBP23.32■■□□□ 1.32
RNF220-212ENST00000475378 WNT10BO00744 389 aa23.32■■□□□ 1.32
RNF220-212ENST00000475378 PDE8AO60658 829 aa23.32■■□□□ 1.32
RNF220-212ENST00000475378 PCCAP05165 728 aaPredicted RBP23.32■■□□□ 1.32
RNF220-212ENST00000475378 HSP90B1P14625 803 aaKnown RBP23.32■■□□□ 1.32
RNF220-212ENST00000475378 ATP2B4P23634 1241 aa23.32■■□□□ 1.32
RNF220-212ENST00000475378 TTLL12Q14166 644 aaPredicted RBP23.32■■□□□ 1.32
RNF220-212ENST00000475378 PTPN12Q05209 780 aaKnown RBP23.31■■□□□ 1.32
RNF220-212ENST00000475378 DACT2Q5SW24 774 aa23.31■■□□□ 1.32
RNF220-212ENST00000475378 DUSP27Q5VZP5 1158 aa23.31■■□□□ 1.32
RNF220-212ENST00000475378 RIC3Q7Z5B4 369 aa23.31■■□□□ 1.32
RNF220-212ENST00000475378 MXD3Q9BW11 206 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 87.3 ms