RNA–Protein interactions for RNA: ENST00000474961.5

DDX39B-217, Transcript of DExD-box helicase 39B, humanhuman

TSL 2

Gene DDX39B, Length 974 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39B-217ENST00000474961 NBPF5PQ86XG9 351 aaPredicted RBP11.89□□□□□ -0.51
DDX39B-217ENST00000474961 NUTM1Q86Y26 1132 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 ANKRD44Q8N8A2 993 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 CCDC136Q96JN2 1154 aa11.89□□□□□ -0.51
DDX39B-217ENST00000474961 BICC1Q9H694 974 aaKnown RBP11.89□□□□□ -0.51
DDX39B-217ENST00000474961 POLRMTO00411 1230 aaKnown RBP11.88□□□□□ -0.51
DDX39B-217ENST00000474961 SERPINB2P05120 415 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 FOXO4P98177 505 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 ATP8B2P98198 1209 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 ERFEQ4G0M1 354 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 B4GALNT3Q6L9W6 998 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 SIRT2Q8IXJ6 389 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 RPAP2Q8IXW5 612 aaPredicted RBP11.88□□□□□ -0.51
DDX39B-217ENST00000474961 SLC16A10Q8TF71 515 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 PLA2G12BQ9BX93 195 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 NRXN2Q9P2S2 1712 aa11.88□□□□□ -0.51
DDX39B-217ENST00000474961 C2orf72A6NCS6 295 aa11.87□□□□□ -0.51
DDX39B-217ENST00000474961 PDE8AO60658 829 aa11.87□□□□□ -0.51
DDX39B-217ENST00000474961 IGHDP01880 384 aa11.87□□□□□ -0.51
DDX39B-217ENST00000474961 MMP10P09238 476 aa11.87□□□□□ -0.51
DDX39B-217ENST00000474961 HCLS1P14317 486 aaPredicted RBP11.87□□□□□ -0.51
DDX39B-217ENST00000474961 GTF2E1P29083 439 aaPredicted RBP11.87□□□□□ -0.51
DDX39B-217ENST00000474961 TMEM92Q6UXU6 159 aa11.87□□□□□ -0.51
DDX39B-217ENST00000474961 GPHNQ9NQX3 736 aaPredicted RBP11.87□□□□□ -0.51
DDX39B-217ENST00000474961 PNMA6EA0A0J9YXQ4 647 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 NPHP1O15259 732 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 HSP90B1P14625 803 aaKnown RBP11.86□□□□□ -0.51
DDX39B-217ENST00000474961 MTX1Q13505 466 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 HDAC1Q13547 482 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-217ENST00000474961 RABL6Q3YEC7 729 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-217ENST00000474961 SLC10A5Q5PT55 438 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 PRR5LQ6MZQ0 368 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 LMBR1LQ6UX01 489 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 CCDC24Q8N4L8 307 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 CNBD1Q8NA66 436 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 RWDD1Q9H446 243 aaPredicted RBP11.86□□□□□ -0.51
DDX39B-217ENST00000474961 PARP3Q9Y6F1 533 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 ABCC12Q96J65 1359 aa11.86□□□□□ -0.51
DDX39B-217ENST00000474961 ANKRD31Q8N7Z5 1873 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
DDX39B-217ENST00000474961 SRGAP3O43295 1099 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 HMMRO75330 724 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 CSF1RP07333 972 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 CTSWP56202 376 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 SSH3Q8TE77 659 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 TAF1P21675 1872 aa11.85□□□□□ -0.51
DDX39B-217ENST00000474961 TNRC6CQ9HCJ0 1690 aaKnown RBP11.84□□□□□ -0.51
DDX39B-217ENST00000474961 ZBTB7AO95365 584 aa11.84□□□□□ -0.51
DDX39B-217ENST00000474961 ST5P78524 1137 aa11.84□□□□□ -0.51
DDX39B-217ENST00000474961 TTLL11Q8NHH1 800 aa11.84□□□□□ -0.51
DDX39B-217ENST00000474961 CHMP3Q9Y3E7 222 aa11.84□□□□□ -0.51
DDX39B-217ENST00000474961 KIF3CO14782 793 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 DOK7Q18PE1 504 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 NLRP3Q96P20 1036 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 CCDC85AQ96PX6 553 aaPredicted RBP11.83□□□□□ -0.52
DDX39B-217ENST00000474961 MTFR1LQ9H019 292 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 RIC1Q4ADV7 1423 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 SPEF2Q9C093 1822 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 KDM2BQ8NHM5 1336 aa11.83□□□□□ -0.52
DDX39B-217ENST00000474961 RIMBP2O15034 1052 aa11.82□□□□□ -0.52
DDX39B-217ENST00000474961 RFX5P48382 616 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-217ENST00000474961 SF3B3Q15393 1217 aaKnown RBP11.82□□□□□ -0.52
DDX39B-217ENST00000474961 FAM161AQ3B820 660 aa11.82□□□□□ -0.52
DDX39B-217ENST00000474961 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
DDX39B-217ENST00000474961 FAM163AQ96GL9 167 aaPredicted RBP11.82□□□□□ -0.52
DDX39B-217ENST00000474961 LARP6Q9BRS8 491 aaKnown RBP11.82□□□□□ -0.52
DDX39B-217ENST00000474961 GREM2Q9H772 168 aa11.82□□□□□ -0.52
DDX39B-217ENST00000474961 DCTPP1Q9H773 170 aa11.82□□□□□ -0.52
DDX39B-217ENST00000474961 ITGA6P23229 1130 aa11.81□□□□□ -0.52
DDX39B-217ENST00000474961 CCDC57Q2TAC2 916 aa11.81□□□□□ -0.52
DDX39B-217ENST00000474961 CENPQQ7L2Z9 268 aaPredicted RBP11.81□□□□□ -0.52
DDX39B-217ENST00000474961 ZNF710Q8N1W2 664 aa11.81□□□□□ -0.52
DDX39B-217ENST00000474961 CRISPLD2Q9H0B8 497 aa11.81□□□□□ -0.52
DDX39B-217ENST00000474961 PA2G4Q9UQ80 394 aaKnown RBP11.81□□□□□ -0.52
DDX39B-217ENST00000474961 RTL9Q8NET4 1388 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 ANKRD18BA2A2Z9 1011 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 SURF6O75683 361 aaKnown RBP11.8□□□□□ -0.52
DDX39B-217ENST00000474961 FOXK1P85037 733 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 PTPN12Q05209 780 aaKnown RBP11.8□□□□□ -0.52
DDX39B-217ENST00000474961 IFIT5Q13325 482 aaKnown RBP11.8□□□□□ -0.52
DDX39B-217ENST00000474961 SMC5Q8IY18 1101 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 KLHDC4Q8TBB5 520 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 GCC1Q96CN9 775 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 ZNF594Q96JF6 807 aaPredicted RBP11.8□□□□□ -0.52
DDX39B-217ENST00000474961 BRIP1Q9BX63 1249 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 COPRSQ9NQ92 184 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 EXOC6BQ9Y2D4 811 aa11.8□□□□□ -0.52
DDX39B-217ENST00000474961 NOP58Q9Y2X3 529 aaKnown RBP11.8□□□□□ -0.52
DDX39B-217ENST00000474961 KIF13BQ9NQT8 1826 aa11.79□□□□□ -0.52
DDX39B-217ENST00000474961 KLRG2A4D1S0 409 aaPredicted RBP11.79□□□□□ -0.52
DDX39B-217ENST00000474961 POLD1P28340 1107 aa11.79□□□□□ -0.52
DDX39B-217ENST00000474961 TAF7LQ5H9L4 462 aa11.79□□□□□ -0.52
DDX39B-217ENST00000474961 SEC31BQ9NQW1 1179 aa11.79□□□□□ -0.52
DDX39B-217ENST00000474961 COL11A2P13942 1736 aaPredicted RBP11.78□□□□□ -0.52
DDX39B-217ENST00000474961 PDE6BP35913 854 aa11.78□□□□□ -0.52
DDX39B-217ENST00000474961 G3BP1Q13283 466 aaKnown RBP eCLIP11.78□□□□□ -0.52
DDX39B-217ENST00000474961 PLPP6Q8IY26 295 aa11.78□□□□□ -0.52
DDX39B-217ENST00000474961 DDX27Q96GQ7 796 aaKnown RBP11.78□□□□□ -0.52
DDX39B-217ENST00000474961 SIL1Q9H173 461 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms