RNA–Protein interactions for RNA: ENST00000474833.5

PCCB-212, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 5

Gene PCCB, Length 921 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-212ENST00000474833 DOK7Q18PE1 504 aa19.37■□□□□ 0.69
PCCB-212ENST00000474833 RBM26Q5T8P6 1007 aaKnown RBP19.37■□□□□ 0.69
PCCB-212ENST00000474833 NECTIN2Q92692 538 aa19.37■□□□□ 0.69
PCCB-212ENST00000474833 PSME4Q14997 1843 aa19.37■□□□□ 0.69
PCCB-212ENST00000474833 KRT24Q2M2I5 525 aa19.36■□□□□ 0.69
PCCB-212ENST00000474833 TBC1D16Q8TBP0 767 aa19.36■□□□□ 0.69
PCCB-212ENST00000474833 BABAM1Q9NWV8 329 aa19.36■□□□□ 0.69
PCCB-212ENST00000474833 HPS5Q9UPZ3 1129 aa19.36■□□□□ 0.69
PCCB-212ENST00000474833 CENPFP49454 3210 aa19.36■□□□□ 0.69
PCCB-212ENST00000474833 MAPK8IP3Q9UPT6 1336 aa19.35■□□□□ 0.69
PCCB-212ENST00000474833 VIL1P09327 827 aaKnown RBP19.35■□□□□ 0.69
PCCB-212ENST00000474833 ISCA1Q9BUE6 129 aa19.35■□□□□ 0.69
PCCB-212ENST00000474833 BRCA2P51587 3418 aa19.34■□□□□ 0.69
PCCB-212ENST00000474833 C6orf229H3BNL8 230 aa19.34■□□□□ 0.69
PCCB-212ENST00000474833 ZNF280AP59817 542 aaPredicted RBP19.34■□□□□ 0.69
PCCB-212ENST00000474833 SULF1Q8IWU6 871 aa19.34■□□□□ 0.69
PCCB-212ENST00000474833 FAM89AQ96GI7 184 aa19.34■□□□□ 0.69
PCCB-212ENST00000474833 CHPF2Q9P2E5 772 aa19.33■□□□□ 0.68
PCCB-212ENST00000474833 ANGEL2Q5VTE6 544 aaKnown RBP19.32■□□□□ 0.68
PCCB-212ENST00000474833 ZNF646O15015 1829 aaPredicted RBP19.32■□□□□ 0.68
PCCB-212ENST00000474833 RIPK4P57078 832 aa19.31■□□□□ 0.68
PCCB-212ENST00000474833 REM2Q8IYK8 340 aaPredicted RBP19.31■□□□□ 0.68
PCCB-212ENST00000474833 PLBD2Q8NHP8 589 aa19.31■□□□□ 0.68
PCCB-212ENST00000474833 GMLQ99445 158 aa19.31■□□□□ 0.68
PCCB-212ENST00000474833 EYA3Q99504 573 aa19.31■□□□□ 0.68
PCCB-212ENST00000474833 PODXL2Q9NZ53 605 aa19.31■□□□□ 0.68
PCCB-212ENST00000474833 ATP5J2-PTCD1G3V325 749 aa19.3■□□□□ 0.68
PCCB-212ENST00000474833 SCARF1Q14162 830 aa19.3■□□□□ 0.68
PCCB-212ENST00000474833 MOB2Q70IA6 237 aa19.3■□□□□ 0.68
PCCB-212ENST00000474833 RPS8P62241 208 aaKnown RBP19.29■□□□□ 0.68
PCCB-212ENST00000474833 FKBP1BP68106 108 aa19.29■□□□□ 0.68
PCCB-212ENST00000474833 RTL5Q5HYW3 569 aaPredicted RBP19.29■□□□□ 0.68
PCCB-212ENST00000474833 ZNF296Q8WUU4 475 aaPredicted RBP19.29■□□□□ 0.68
PCCB-212ENST00000474833 PITPNM2Q9BZ72 1349 aa19.28■□□□□ 0.68
PCCB-212ENST00000474833 CHL1O00533 1208 aa19.28■□□□□ 0.68
PCCB-212ENST00000474833 TMPOP42166 694 aaKnown RBP19.28■□□□□ 0.68
PCCB-212ENST00000474833 RSBN1LQ6PCB5 846 aaPredicted RBP19.28■□□□□ 0.68
PCCB-212ENST00000474833 SCAF8Q9UPN6 1271 aaKnown RBP19.28■□□□□ 0.68
PCCB-212ENST00000474833 IRS4O14654 1257 aaPredicted RBP19.27■□□□□ 0.68
PCCB-212ENST00000474833 UFL1O94874 794 aa19.27■□□□□ 0.68
PCCB-212ENST00000474833 PKN2Q16513 984 aaKnown RBP19.27■□□□□ 0.68
PCCB-212ENST00000474833 ANKRD13DQ6ZTN6 518 aa19.27■□□□□ 0.68
PCCB-212ENST00000474833 AGBL3Q8NEM8 1001 aa19.27■□□□□ 0.68
PCCB-212ENST00000474833 ZC3H12CQ9C0D7 883 aaKnown RBP19.27■□□□□ 0.68
PCCB-212ENST00000474833 PNNQ9H307 717 aaKnown RBP19.27■□□□□ 0.68
PCCB-212ENST00000474833 SEC31BQ9NQW1 1179 aa19.27■□□□□ 0.68
PCCB-212ENST00000474833 TBC1D8O95759 1140 aa19.26■□□□□ 0.67
PCCB-212ENST00000474833 TRIM28Q13263 835 aaKnown RBP19.26■□□□□ 0.67
PCCB-212ENST00000474833 MYOZ2Q9NPC6 264 aa19.26■□□□□ 0.67
PCCB-212ENST00000474833 NOM1Q5C9Z4 860 aaKnown RBP19.25■□□□□ 0.67
PCCB-212ENST00000474833 HDGFL1Q5TGJ6 251 aa19.25■□□□□ 0.67
PCCB-212ENST00000474833 UBE2Q2LH0YL09 131 aa19.24■□□□□ 0.67
PCCB-212ENST00000474833 USP17L8P0C7I0 530 aa19.24■□□□□ 0.67
PCCB-212ENST00000474833 TM4SF4P48230 202 aa19.23■□□□□ 0.67
PCCB-212ENST00000474833 LMOD3Q0VAK6 560 aa19.23■□□□□ 0.67
PCCB-212ENST00000474833 PRAMEF18Q5VWM3 479 aa19.23■□□□□ 0.67
PCCB-212ENST00000474833 R3HDMLQ9H3Y0 253 aa19.23■□□□□ 0.67
PCCB-212ENST00000474833 GGA1Q9UJY5 639 aa19.23■□□□□ 0.67
PCCB-212ENST00000474833 WTIPA6NIX2 430 aaPredicted RBP19.22■□□□□ 0.67
PCCB-212ENST00000474833 GPR25O00155 361 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 HOXB7P09629 217 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 NBPF9Q3BBW0 867 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 FBXO46Q6PJ61 603 aaPredicted RBP19.22■□□□□ 0.67
PCCB-212ENST00000474833 CFHR5Q9BXR6 569 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 ANKIB1Q9P2G1 1089 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 DBF4Q9UBU7 674 aaPredicted RBP19.22■□□□□ 0.67
PCCB-212ENST00000474833 HDAC9Q9UKV0 1011 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 TRIM35Q9UPQ4 493 aa19.22■□□□□ 0.67
PCCB-212ENST00000474833 ZBTB38Q8NAP3 1195 aaPredicted RBP19.21■□□□□ 0.67
PCCB-212ENST00000474833 RALBP1Q15311 655 aa19.2■□□□□ 0.66
PCCB-212ENST00000474833 USP17L3A6NCW0 530 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 USP17L4A6NCW7 530 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 USP17L1Q7RTZ2 530 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 MXD3Q9BW11 206 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 HYPKQ9NX55 129 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 XDHP47989 1333 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 LAMB1P07942 1786 aa19.19■□□□□ 0.66
PCCB-212ENST00000474833 DACT2Q5SW24 774 aa19.18■□□□□ 0.66
PCCB-212ENST00000474833 PODNQ7Z5L7 613 aa19.18■□□□□ 0.66
PCCB-212ENST00000474833 RBBP6Q7Z6E9 1792 aaKnown RBP19.17■□□□□ 0.66
PCCB-212ENST00000474833 G3V3G9 751 aa19.17■□□□□ 0.66
PCCB-212ENST00000474833 MKRN3Q13064 507 aaKnown RBP19.17■□□□□ 0.66
PCCB-212ENST00000474833 DCAF8Q5TAQ9 597 aa19.17■□□□□ 0.66
PCCB-212ENST00000474833 MED23Q9ULK4 1368 aa19.17■□□□□ 0.66
PCCB-212ENST00000474833 WNT10BO00744 389 aa19.16■□□□□ 0.66
PCCB-212ENST00000474833 NEUROD2Q15784 382 aa19.16■□□□□ 0.66
PCCB-212ENST00000474833 CCDC152Q4G0S7 254 aa19.16■□□□□ 0.66
PCCB-212ENST00000474833 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
PCCB-212ENST00000474833 CCDC85AQ96PX6 553 aaPredicted RBP19.16■□□□□ 0.66
PCCB-212ENST00000474833 LAS1LQ9Y4W2 734 aaKnown RBP19.16■□□□□ 0.66
PCCB-212ENST00000474833 SPEF2Q9C093 1822 aa19.16■□□□□ 0.66
PCCB-212ENST00000474833 SZT2Q5T011 3432 aa19.15■□□□□ 0.66
PCCB-212ENST00000474833 FKTNO75072 461 aa19.15■□□□□ 0.66
PCCB-212ENST00000474833 PCCAP05165 728 aaPredicted RBP19.15■□□□□ 0.66
PCCB-212ENST00000474833 PTPN12Q05209 780 aaKnown RBP19.15■□□□□ 0.66
PCCB-212ENST00000474833 DDX10Q13206 875 aaKnown RBP19.15■□□□□ 0.66
PCCB-212ENST00000474833 DUSP27Q5VZP5 1158 aa19.15■□□□□ 0.66
PCCB-212ENST00000474833 JARID2Q92833 1246 aaPredicted RBP19.15■□□□□ 0.66
PCCB-212ENST00000474833 PDE8AO60658 829 aa19.14■□□□□ 0.65
PCCB-212ENST00000474833 SASH1O94885 1247 aa19.14■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms