RNA–Protein interactions for RNA: ENST00000474637.5

GAPVD1-216, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 2,545 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-216ENST00000474637 C21orf2O43822 256 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 INTS3Q68E01 1043 aaKnown RBP5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 SUPT20HQ8NEM7 779 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 C7orf43Q8WVR3 580 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 VPS33BQ9H267 617 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 ATP6V0A2Q9Y487 856 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 CSF1RP07333 972 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 TRIM27P14373 513 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 FKBP4Q02790 459 aaKnown RBP eCLIP5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 ANKRD18AQ8IVF6 992 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 TTLL11Q8NHH1 800 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 PSMD1Q99460 953 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 TAOK3Q9H2K8 898 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 WWC3Q9ULE0 1092 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 LRRC37AA6NMS7 1700 aa5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 ZC3H4Q9UPT8 1303 aaKnown RBP5.17□□□□□ -1.58
GAPVD1-216ENST00000474637 ANKRD18BA2A2Z9 1011 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 GNAI3P08754 354 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 LMNB1P20700 586 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 IGHMBP2P38935 993 aaKnown RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 RPS8P62241 208 aaKnown RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 ITPRIPQ8IWB1 547 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 JARID2Q92833 1246 aaPredicted RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 CHMP4BQ9H444 224 aaKnown RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 UBTFL1P0CB47 393 aaPredicted RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 FOXO4P98177 505 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 IFIT5Q13325 482 aaKnown RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 USP44Q9H0E7 712 aa5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 BSDC1Q9NW68 430 aaPredicted RBP5.16□□□□□ -1.58
GAPVD1-216ENST00000474637 SBF1O95248 1867 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 DICER1Q9UPY3 1922 aaKnown RBP5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 ITGA6P23229 1130 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 YY1P25490 414 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 RASSF7Q02833 373 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 CCDC57Q2TAC2 916 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 RABL6Q3YEC7 729 aaPredicted RBP5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 C9orf131Q5VYM1 1079 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 DPP8Q6V1X1 898 aaPredicted RBP5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 MPNDQ8N594 471 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 CELF1Q92879 486 aaKnown RBP5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 SUCLG2Q96I99 432 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 EYA3Q99504 573 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 RTFDC1Q9BY42 306 aaPredicted RBP5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 GREM2Q9H772 168 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 CHMP3Q9Y3E7 222 aa5.15□□□□□ -1.58
GAPVD1-216ENST00000474637 SNED1Q8TER0 1413 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 NFKBIEO00221 500 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 FRAT2O75474 233 aaPredicted RBP5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 NBPF7P0C2Y1 421 aaPredicted RBP5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 DSG3P32926 999 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 TAF7LQ5H9L4 462 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 LMBR1LQ6UX01 489 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 TMEM57Q8N5G2 664 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 MPHOSPH8Q99549 860 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 ANKRD2Q9GZV1 360 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 SEC31BQ9NQW1 1179 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 PODXL2Q9NZ53 605 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 RNF181Q9P0P0 153 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 DDX19BQ9UMR2 479 aa5.15□□□□□ -1.59
GAPVD1-216ENST00000474637 TIAM2Q8IVF5 1701 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 ATP2B4P23634 1241 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 IARSP41252 1262 aaKnown RBP5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 ANKRD44Q8N8A2 993 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 CCDC85AQ96PX6 553 aaPredicted RBP5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 BICC1Q9H694 974 aaKnown RBP5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 TAF1P21675 1872 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 CCDC88AQ3V6T2 1871 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 SPEF2Q9C093 1822 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 XDHP47989 1333 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 GNAI2P04899 355 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 GPSM2P81274 684 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 EPHA10Q5JZY3 1008 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 UPF2Q9HAU5 1272 aaKnown RBP5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 ZBTB40Q9NUA8 1239 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 ANKIB1Q9P2G1 1089 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 GGA1Q9UJY5 639 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 FBXO3Q9UK99 471 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 LEMD3Q9Y2U8 911 aa5.14□□□□□ -1.59
GAPVD1-216ENST00000474637 LTBP1Q14766 1721 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 HDAC1Q13547 482 aaPredicted RBP5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 NIM1KQ8IY84 436 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 JDP2Q8WYK2 163 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 KAZALD1Q96I82 304 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 ZMYND15Q9H091 742 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 ZNF277Q9NRM2 450 aaPredicted RBP5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 MINPP1Q9UNW1 487 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 MROH5Q6ZUA9 1318 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 PPIP5K2O43314 1243 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 KIAA2012Q0VF49 1180 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 BECN1Q14457 450 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 DPY19L2Q6NUT2 758 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 OLFM4Q6UX06 510 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 LDHAL6AQ6ZMR3 332 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 LARGE2Q8N3Y3 721 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 MEIS3Q99687 375 aa5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 SLKQ9H2G2 1235 aaPredicted RBP5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 NSFL1CQ9UNZ2 370 aaKnown RBP5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 LRRFIP2Q9Y608 721 aaKnown RBP5.13□□□□□ -1.59
GAPVD1-216ENST00000474637 C6orf229H3BNL8 230 aa5.12□□□□□ -1.59
GAPVD1-216ENST00000474637 UFL1O94874 794 aa5.12□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms