RNA–Protein interactions for RNA: ENST00000474617.1

CCM2-206, Transcript of CCM2 scaffold protein, humanhuman

TSL 5 BASIC

Gene CCM2, Length 1,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-206ENST00000474617 LDHAL6AQ6ZMR3 332 aa26.09■■□□□ 1.77
CCM2-206ENST00000474617 RASEFQ8IZ41 740 aa26.09■■□□□ 1.77
CCM2-206ENST00000474617 UPF3BQ9BZI7 483 aaKnown RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 FOXD4L1Q9NU39 408 aa26.09■■□□□ 1.77
CCM2-206ENST00000474617 ZSCAN21Q9Y5A6 473 aaPredicted RBP26.09■■□□□ 1.77
CCM2-206ENST00000474617 UBN2Q6ZU65 1347 aa26.08■■□□□ 1.77
CCM2-206ENST00000474617 MROH5Q6ZUA9 1318 aa26.08■■□□□ 1.77
CCM2-206ENST00000474617 TAF5LO75529 589 aa26.08■■□□□ 1.77
CCM2-206ENST00000474617 SSFA2P28290 1259 aa26.08■■□□□ 1.77
CCM2-206ENST00000474617 TIMM10P62072 90 aa26.08■■□□□ 1.77
CCM2-206ENST00000474617 RC3H1Q5TC82 1133 aaKnown RBP26.08■■□□□ 1.77
CCM2-206ENST00000474617 LAMB2P55268 1798 aa26.08■■□□□ 1.76
CCM2-206ENST00000474617 BCORQ6W2J9 1755 aa26.07■■□□□ 1.76
CCM2-206ENST00000474617 CASTP20810 708 aaKnown RBP26.07■■□□□ 1.76
CCM2-206ENST00000474617 METTL24Q5JXM2 366 aa26.07■■□□□ 1.76
CCM2-206ENST00000474617 TTC39AQ5SRH9 613 aa26.07■■□□□ 1.76
CCM2-206ENST00000474617 RUFY3Q7L099 469 aa26.07■■□□□ 1.76
CCM2-206ENST00000474617 PUS3Q9BZE2 481 aaKnown RBP26.07■■□□□ 1.76
CCM2-206ENST00000474617 USP21Q9UK80 565 aa26.07■■□□□ 1.76
CCM2-206ENST00000474617 RIC1Q4ADV7 1423 aa26.06■■□□□ 1.76
CCM2-206ENST00000474617 SLC27A2O14975 620 aa26.06■■□□□ 1.76
CCM2-206ENST00000474617 ATP2B3Q16720 1220 aa26.06■■□□□ 1.76
CCM2-206ENST00000474617 JAKMIP1Q96N16 626 aaKnown RBP26.06■■□□□ 1.76
CCM2-206ENST00000474617 GREM2Q9H772 168 aa26.06■■□□□ 1.76
CCM2-206ENST00000474617 NHSQ6T4R5 1651 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 A0A0G2JS52 829 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 TRAK2O60296 914 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 XAGE2Q96GT9 111 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 DSCC1Q9BVC3 393 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 CNNM1Q9NRU3 951 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 PDRG1Q9NUG6 133 aa26.05■■□□□ 1.76
CCM2-206ENST00000474617 ISY1Q9ULR0 285 aaKnown RBP26.04■■□□□ 1.76
CCM2-206ENST00000474617 GOLIM4O00461 696 aa26.04■■□□□ 1.76
CCM2-206ENST00000474617 CCDC152Q4G0S7 254 aa26.04■■□□□ 1.76
CCM2-206ENST00000474617 ZMYM1Q5SVZ6 1142 aa26.04■■□□□ 1.76
CCM2-206ENST00000474617 RNF113AO15541 343 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 BAG4O95429 457 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 HMGB1P09429 215 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 AK2P54819 239 aa26.03■■□□□ 1.76
CCM2-206ENST00000474617 TTF1Q15361 905 aaPredicted RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 ZSCAN25Q6NSZ9 544 aa26.03■■□□□ 1.76
CCM2-206ENST00000474617 DDX46Q7L014 1031 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 ZGPATQ8N5A5 531 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 MYH14Q7Z406 1995 aaKnown RBP26.03■■□□□ 1.76
CCM2-206ENST00000474617 PDE8BO95263 885 aa26.02■■□□□ 1.76
CCM2-206ENST00000474617 UQCRFS1P1P0C7P4 283 aa26.01■■□□□ 1.75
CCM2-206ENST00000474617 SUSD4Q5VX71 490 aa26.01■■□□□ 1.75
CCM2-206ENST00000474617 BLOC1S2Q6QNY1 142 aa26.01■■□□□ 1.75
CCM2-206ENST00000474617 VGLL2Q8N8G2 317 aa26.01■■□□□ 1.75
CCM2-206ENST00000474617 HMGB2P26583 209 aaKnown RBP26■■□□□ 1.75
CCM2-206ENST00000474617 PUM3Q15397 648 aaKnown RBP26■■□□□ 1.75
CCM2-206ENST00000474617 ZNF589Q86UQ0 364 aaPredicted RBP26■■□□□ 1.75
CCM2-206ENST00000474617 EDC3Q96F86 508 aaKnown RBP26■■□□□ 1.75
CCM2-206ENST00000474617 DDX24Q9GZR7 859 aaKnown RBP eCLIP26■■□□□ 1.75
CCM2-206ENST00000474617 WDR33Q9C0J8 1336 aaKnown RBP25.99■■□□□ 1.75
CCM2-206ENST00000474617 CERKQ8TCT0 537 aa25.99■■□□□ 1.75
CCM2-206ENST00000474617 LPIN2Q92539 896 aa25.99■■□□□ 1.75
CCM2-206ENST00000474617 NIP7Q9Y221 180 aaKnown RBP eCLIP25.99■■□□□ 1.75
CCM2-206ENST00000474617 ARAP2Q8WZ64 1704 aa25.99■■□□□ 1.75
CCM2-206ENST00000474617 KCNQ2O43526 872 aa25.98■■□□□ 1.75
CCM2-206ENST00000474617 NTSR2O95665 410 aa25.98■■□□□ 1.75
CCM2-206ENST00000474617 BRD1O95696 1058 aa25.98■■□□□ 1.75
CCM2-206ENST00000474617 SCN7AQ01118 1682 aa25.98■■□□□ 1.75
CCM2-206ENST00000474617 ONECUT3O60422 494 aaPredicted RBP25.97■■□□□ 1.75
CCM2-206ENST00000474617 RPS6KB1P23443 525 aa25.97■■□□□ 1.75
CCM2-206ENST00000474617 L1TD1Q5T7N2 865 aaKnown RBP25.97■■□□□ 1.75
CCM2-206ENST00000474617 CHMP4CQ96CF2 233 aa25.97■■□□□ 1.75
CCM2-206ENST00000474617 CTNNA3Q9UI47 895 aa25.97■■□□□ 1.75
CCM2-206ENST00000474617 DDX60Q8IY21 1712 aaKnown RBP25.96■■□□□ 1.75
CCM2-206ENST00000474617 IGHMBP2P38935 993 aaKnown RBP25.96■■□□□ 1.75
CCM2-206ENST00000474617 ADCK5Q3MIX3 580 aa25.96■■□□□ 1.75
CCM2-206ENST00000474617 SYNE4Q8N205 404 aa25.96■■□□□ 1.75
CCM2-206ENST00000474617 GJD4Q96KN9 370 aaPredicted RBP25.96■■□□□ 1.75
CCM2-206ENST00000474617 MPHOSPH8Q99549 860 aa25.96■■□□□ 1.75
CCM2-206ENST00000474617 BTAF1O14981 1849 aa25.95■■□□□ 1.74
CCM2-206ENST00000474617 SLC5A1P13866 664 aa25.95■■□□□ 1.74
CCM2-206ENST00000474617 ARID4AP29374 1257 aaPredicted RBP25.95■■□□□ 1.74
CCM2-206ENST00000474617 MEX3CQ5U5Q3 659 aaKnown RBP25.95■■□□□ 1.74
CCM2-206ENST00000474617 LINC00116Q8NCU8 138 aa25.95■■□□□ 1.74
CCM2-206ENST00000474617 CDC5LQ99459 802 aaKnown RBP25.95■■□□□ 1.74
CCM2-206ENST00000474617 NYXQ9GZU5 481 aa25.95■■□□□ 1.74
CCM2-206ENST00000474617 RPS6KA4O75676 772 aa25.94■■□□□ 1.74
CCM2-206ENST00000474617 CCDC85AQ96PX6 553 aaPredicted RBP25.94■■□□□ 1.74
CCM2-206ENST00000474617 ATRNO75882 1429 aa25.94■■□□□ 1.74
CCM2-206ENST00000474617 FGFR2P21802 821 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 ADORA1P30542 326 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 FKBP4Q02790 459 aaKnown RBP eCLIP25.93■■□□□ 1.74
CCM2-206ENST00000474617 KLHL40Q2TBA0 621 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 APPBP2Q92624 585 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 TRPC5Q9UL62 973 aaPredicted RBP25.93■■□□□ 1.74
CCM2-206ENST00000474617 SMC3Q9UQE7 1217 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 ATP6V1DQ9Y5K8 247 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 NEK1Q96PY6 1258 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 NARFQ9UHQ1 456 aa25.93■■□□□ 1.74
CCM2-206ENST00000474617 SF3B3Q15393 1217 aaKnown RBP25.92■■□□□ 1.74
CCM2-206ENST00000474617 ZDHHC9Q9Y397 364 aa25.92■■□□□ 1.74
CCM2-206ENST00000474617 MAST3O60307 1309 aa25.91■■□□□ 1.74
CCM2-206ENST00000474617 SLC10A5Q5PT55 438 aa25.91■■□□□ 1.74
CCM2-206ENST00000474617 HCLS1P14317 486 aaPredicted RBP25.9■■□□□ 1.74
CCM2-206ENST00000474617 PDCP20941 246 aa25.9■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms