RNA–Protein interactions for RNA: ENST00000474568.5

ITGB1-210, Transcript of integrin subunit beta 1, humanhuman

TSL 5

Gene ITGB1, Length 788 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-210ENST00000474568 CT47B1P0C2W7 299 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-210ENST00000474568 CXCL9Q07325 125 aa20.24■□□□□ 0.83
ITGB1-210ENST00000474568 LMBR1LQ6UX01 489 aa20.24■□□□□ 0.83
ITGB1-210ENST00000474568 EYA3Q99504 573 aa20.24■□□□□ 0.83
ITGB1-210ENST00000474568 TAF1DQ9H5J8 278 aaPredicted RBP20.24■□□□□ 0.83
ITGB1-210ENST00000474568 WTIPA6NIX2 430 aaPredicted RBP20.23■□□□□ 0.83
ITGB1-210ENST00000474568 YDJCA8MPS7 323 aa20.23■□□□□ 0.83
ITGB1-210ENST00000474568 NBPF7P0C2Y1 421 aaPredicted RBP20.23■□□□□ 0.83
ITGB1-210ENST00000474568 RARSP54136 660 aaKnown RBP20.23■□□□□ 0.83
ITGB1-210ENST00000474568 FSTL1Q12841 308 aa20.23■□□□□ 0.83
ITGB1-210ENST00000474568 SUCLG2Q96I99 432 aa20.23■□□□□ 0.83
ITGB1-210ENST00000474568 BSDC1Q9NW68 430 aaPredicted RBP20.23■□□□□ 0.83
ITGB1-210ENST00000474568 PODXL2Q9NZ53 605 aa20.23■□□□□ 0.83
ITGB1-210ENST00000474568 MINPP1Q9UNW1 487 aa20.23■□□□□ 0.83
ITGB1-210ENST00000474568 ANKRD18BA2A2Z9 1011 aa20.22■□□□□ 0.83
ITGB1-210ENST00000474568 EPHX2P34913 555 aa20.22■□□□□ 0.83
ITGB1-210ENST00000474568 CIAPIN1Q6FI81 312 aa20.22■□□□□ 0.83
ITGB1-210ENST00000474568 MPHOSPH8Q99549 860 aa20.22■□□□□ 0.83
ITGB1-210ENST00000474568 ZC3H12CQ9C0D7 883 aaKnown RBP20.22■□□□□ 0.83
ITGB1-210ENST00000474568 XDHP47989 1333 aa20.22■□□□□ 0.83
ITGB1-210ENST00000474568 ECE2O60344 883 aa20.21■□□□□ 0.83
ITGB1-210ENST00000474568 LMOD1P29536 600 aaPredicted RBP20.21■□□□□ 0.83
ITGB1-210ENST00000474568 EPS15P42566 896 aa20.21■□□□□ 0.83
ITGB1-210ENST00000474568 IFIT5Q13325 482 aaKnown RBP20.21■□□□□ 0.83
ITGB1-210ENST00000474568 CLEC11AQ9Y240 323 aa20.21■□□□□ 0.83
ITGB1-210ENST00000474568 G3V3G9 751 aa20.2■□□□□ 0.82
ITGB1-210ENST00000474568 ATP2B4P23634 1241 aa20.2■□□□□ 0.82
ITGB1-210ENST00000474568 GMPSP49915 693 aaPredicted RBP20.2■□□□□ 0.82
ITGB1-210ENST00000474568 SCNN1DP51172 638 aa20.2■□□□□ 0.82
ITGB1-210ENST00000474568 DCAF8Q5TAQ9 597 aa20.2■□□□□ 0.82
ITGB1-210ENST00000474568 ZNF594Q96JF6 807 aaPredicted RBP20.2■□□□□ 0.82
ITGB1-210ENST00000474568 KCNQ5Q9NR82 932 aa20.2■□□□□ 0.82
ITGB1-210ENST00000474568 HTRA3P83110 453 aa20.19■□□□□ 0.82
ITGB1-210ENST00000474568 TAF7LQ5H9L4 462 aa20.19■□□□□ 0.82
ITGB1-210ENST00000474568 CHADLQ6NUI6 762 aa20.19■□□□□ 0.82
ITGB1-210ENST00000474568 KAZALD1Q96I82 304 aa20.19■□□□□ 0.82
ITGB1-210ENST00000474568 TNIP1Q15025 636 aa20.18■□□□□ 0.82
ITGB1-210ENST00000474568 CCDC57Q2TAC2 916 aa20.18■□□□□ 0.82
ITGB1-210ENST00000474568 BICC1Q9H694 974 aaKnown RBP20.18■□□□□ 0.82
ITGB1-210ENST00000474568 MYH3P11055 1940 aa20.17■□□□□ 0.82
ITGB1-210ENST00000474568 LTBP1Q14766 1721 aa20.17■□□□□ 0.82
ITGB1-210ENST00000474568 PSMD14O00487 310 aa20.17■□□□□ 0.82
ITGB1-210ENST00000474568 BCAR3O75815 825 aa20.17■□□□□ 0.82
ITGB1-210ENST00000474568 CCT4P50991 539 aaKnown RBP20.17■□□□□ 0.82
ITGB1-210ENST00000474568 LDHDQ86WU2 507 aa20.17■□□□□ 0.82
ITGB1-210ENST00000474568 HELBQ8NG08 1087 aaPredicted RBP20.17■□□□□ 0.82
ITGB1-210ENST00000474568 API5Q9BZZ5 524 aaKnown RBP20.17■□□□□ 0.82
ITGB1-210ENST00000474568 ZBTB12Q9Y330 459 aaPredicted RBP20.17■□□□□ 0.82
ITGB1-210ENST00000474568 SHTN1A0MZ66 631 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 APLP1P51693 650 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 CHRNDQ07001 517 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 FRAT1Q92837 279 aaPredicted RBP20.16■□□□□ 0.82
ITGB1-210ENST00000474568 USP44Q9H0E7 712 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 UTYO14607 1347 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 ZBED9Q6R2W3 1325 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 SPEF2Q9C093 1822 aa20.16■□□□□ 0.82
ITGB1-210ENST00000474568 SNAP23O00161 211 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 TAF5LO75529 589 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 KCNJ4P48050 445 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 PNMA8AQ86V59 439 aaPredicted RBP20.15■□□□□ 0.82
ITGB1-210ENST00000474568 ANKRD2Q9GZV1 360 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 GPRC5DQ9NZD1 345 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 TNNQ9UQP3 1299 aa20.15■□□□□ 0.82
ITGB1-210ENST00000474568 KIF16BQ96L93 1317 aa20.14■□□□□ 0.81
ITGB1-210ENST00000474568 PLIN1O60240 522 aa20.14■□□□□ 0.81
ITGB1-210ENST00000474568 KLRK1P26718 216 aa20.14■□□□□ 0.81
ITGB1-210ENST00000474568 BRPF1P55201 1214 aaPredicted RBP20.14■□□□□ 0.81
ITGB1-210ENST00000474568 MAP1SQ66K74 1059 aaPredicted RBP20.14■□□□□ 0.81
ITGB1-210ENST00000474568 ANKRD44Q8N8A2 993 aa20.14■□□□□ 0.81
ITGB1-210ENST00000474568 CNNM1Q9NRU3 951 aa20.14■□□□□ 0.81
ITGB1-210ENST00000474568 ZNF804BA4D1E1 1349 aa20.13■□□□□ 0.81
ITGB1-210ENST00000474568 LDHAL6AQ6ZMR3 332 aa20.13■□□□□ 0.81
ITGB1-210ENST00000474568 TXNRD3Q86VQ6 643 aa20.13■□□□□ 0.81
ITGB1-210ENST00000474568 LEMD3Q9Y2U8 911 aa20.13■□□□□ 0.81
ITGB1-210ENST00000474568 SCN4AP35499 1836 aa20.13■□□□□ 0.81
ITGB1-210ENST00000474568 MED23Q9ULK4 1368 aa20.12■□□□□ 0.81
ITGB1-210ENST00000474568 FBXW7Q969H0 707 aa20.12■□□□□ 0.81
ITGB1-210ENST00000474568 PUS3Q9BZE2 481 aaKnown RBP20.12■□□□□ 0.81
ITGB1-210ENST00000474568 ADARB2Q9NS39 739 aaKnown RBP20.12■□□□□ 0.81
ITGB1-210ENST00000474568 CNOT7Q9UIV1 285 aaKnown RBP20.12■□□□□ 0.81
ITGB1-210ENST00000474568 RABL6Q3YEC7 729 aaPredicted RBP20.11■□□□□ 0.81
ITGB1-210ENST00000474568 MICALL2Q8IY33 904 aa20.11■□□□□ 0.81
ITGB1-210ENST00000474568 TRPM4Q8TD43 1214 aa20.11■□□□□ 0.81
ITGB1-210ENST00000474568 UBTFL1P0CB47 393 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-210ENST00000474568 USP50Q70EL3 339 aaPredicted RBP20.1■□□□□ 0.81
ITGB1-210ENST00000474568 KLHDC4Q8TBB5 520 aa20.1■□□□□ 0.81
ITGB1-210ENST00000474568 CLUAP1Q96AJ1 413 aa20.1■□□□□ 0.81
ITGB1-210ENST00000474568 H7C1D1 291 aa20.09■□□□□ 0.81
ITGB1-210ENST00000474568 IPO8O15397 1037 aaKnown RBP20.09■□□□□ 0.81
ITGB1-210ENST00000474568 TRIM27P14373 513 aa20.09■□□□□ 0.81
ITGB1-210ENST00000474568 RBM26Q5T8P6 1007 aaKnown RBP20.09■□□□□ 0.81
ITGB1-210ENST00000474568 CNTROBQ8N137 903 aa20.09■□□□□ 0.81
ITGB1-210ENST00000474568 ARHGAP45Q92619 1136 aa20.09■□□□□ 0.81
ITGB1-210ENST00000474568 VIL1P09327 827 aaKnown RBP20.08■□□□□ 0.81
ITGB1-210ENST00000474568 TBC1D10BQ4KMP7 808 aaPredicted RBP20.08■□□□□ 0.81
ITGB1-210ENST00000474568 SAMD7Q7Z3H4 446 aa20.08■□□□□ 0.81
ITGB1-210ENST00000474568 MEIS3Q99687 375 aa20.08■□□□□ 0.81
ITGB1-210ENST00000474568 MXD3Q9BW11 206 aa20.08■□□□□ 0.81
ITGB1-210ENST00000474568 USP17L3A6NCW0 530 aa20.07■□□□□ 0.8
ITGB1-210ENST00000474568 USP17L4A6NCW7 530 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms