RNA–Protein interactions for RNA: ENST00000474475.1

TNFRSF9-202, Transcript of TNF receptor superfamily member 9, humanhuman

TSL 3

Gene TNFRSF9, Length 445 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF9-202ENST00000474475 MKRN1Q9UHC7 482 aaKnown RBP11.36□□□□□ -0.59
TNFRSF9-202ENST00000474475 LMOD1P29536 600 aaPredicted RBP11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 CXCL9Q07325 125 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 GOLGA2Q08379 1002 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 KIAA2012Q0VF49 1180 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 RIC3Q7Z5B4 369 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 CNTROBQ8N137 903 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 TSPYL6Q8N831 410 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 CELF1Q92879 486 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 TMEM106CQ9BVX2 250 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 RYDENQ9NUL5 291 aaKnown RBP11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 ZNRF3Q9ULT6 936 aa11.35□□□□□ -0.59
TNFRSF9-202ENST00000474475 CNTNAP1P78357 1384 aa11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 TMEM88BA6NKF7 163 aa11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 IRS4O14654 1257 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 HSPA1AP0DMV8 641 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 HSPA1BP0DMV9 641 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 PAXIP1Q6ZW49 1069 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 TMC4Q7Z404 712 aa11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 TSR2Q969E8 191 aaKnown RBP11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 MYD88Q99836 296 aa11.34□□□□□ -0.59
TNFRSF9-202ENST00000474475 GALR2O43603 387 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 TIE1P35590 1138 aa11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 CCDC27Q2M243 656 aa11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 CCDC30Q5VVM6 783 aa11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 WWC1Q8IX03 1113 aa11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 ZBTB38Q8NAP3 1195 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 GPRC5DQ9NZD1 345 aa11.33□□□□□ -0.6
TNFRSF9-202ENST00000474475 YDJCA8MPS7 323 aa11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 ZEB1P37275 1124 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 GMPSP49915 693 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 GPSM2P81274 684 aa11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 FMR1Q06787 632 aaKnown RBP eCLIP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 CIAPIN1Q6FI81 312 aa11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 USP50Q70EL3 339 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 CCDC191Q8NCU4 936 aa11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 JARID2Q92833 1246 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 METTL22Q9BUU2 404 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 NSFL1CQ9UNZ2 370 aaKnown RBP11.32□□□□□ -0.6
TNFRSF9-202ENST00000474475 RAD17O75943 681 aa11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 RPS8P62241 208 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 MRS2Q9HD23 443 aa11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 SEC31BQ9NQW1 1179 aa11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 ADARB2Q9NS39 739 aaKnown RBP11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 POLLQ9UGP5 575 aa11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 MAP3K2Q9Y2U5 619 aa11.31□□□□□ -0.6
TNFRSF9-202ENST00000474475 DDX58O95786 925 aaKnown RBP11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 PCCAP05165 728 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 VEGFBP49765 207 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 TNIP1Q15025 636 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 WASHC4Q2M389 1173 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 TWISTNBQ3B726 338 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 KSR2Q6VAB6 950 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 CHMP4AQ9BY43 222 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 CWC25Q9NXE8 425 aaPredicted RBP11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 CDHR2Q9BYE9 1310 aa11.3□□□□□ -0.6
TNFRSF9-202ENST00000474475 SHTN1A0MZ66 631 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 PI4KAP2A4QPH2 592 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 ZNF316A6NFI3 1004 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 RASSF10A6NK89 507 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 C6orf229H3BNL8 230 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 TRAF5O00463 557 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 RIMBP2O15034 1052 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 PDE8AO60658 829 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 GABBR2O75899 941 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 IGKV5-2P06315 115 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 HIRAP54198 1017 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 G2E3Q7L622 706 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 PI4KAP1Q8N8J0 262 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 TBC1D16Q8TBP0 767 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 GPR101Q96P66 508 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 CCDC85AQ96PX6 553 aaPredicted RBP11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 BCL2L13Q9BXK5 485 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 DBNDD1Q9H9R9 158 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 IL16Q14005 1332 aa11.29□□□□□ -0.6
TNFRSF9-202ENST00000474475 ANP32CO43423 234 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 HSP90B1P14625 803 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 DEFB115Q30KQ5 88 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 CCDC152Q4G0S7 254 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 CST9Q5W186 159 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 STK31Q9BXU1 1019 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 PGAP2Q9UHJ9 254 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 CNOT7Q9UIV1 285 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 ABT1Q9ULW3 272 aaKnown RBP11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 TRPC6Q9Y210 931 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 RTL9Q8NET4 1388 aa11.28□□□□□ -0.6
TNFRSF9-202ENST00000474475 TRPM7Q96QT4 1865 aa11.27□□□□□ -0.6
TNFRSF9-202ENST00000474475 PSMD14O00487 310 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 ECE2O60344 883 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 DOK7Q18PE1 504 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 CWF19L2Q2TBE0 894 aaKnown RBP11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 TRPM4Q8TD43 1214 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 EYA3Q99504 573 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 KCNQ5Q9NR82 932 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 PODXL2Q9NZ53 605 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 FANCIQ9NVI1 1328 aa11.27□□□□□ -0.61
TNFRSF9-202ENST00000474475 TTLL13PA6NNM8 815 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 NEURL1BA8MQ27 555 aa11.26□□□□□ -0.61
TNFRSF9-202ENST00000474475 FOXN1O15353 648 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms