RNA–Protein interactions for RNA: ENST00000474249.5

GAPDH-208, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

TSL 5

Gene GAPDH, Length 1,333 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-208ENST00000474249 DOK7Q18PE1 504 aa17.31■□□□□ 0.36
GAPDH-208ENST00000474249 HDGFL1Q5TGJ6 251 aa17.31■□□□□ 0.36
GAPDH-208ENST00000474249 ASTN2O75129 1339 aaPredicted RBP17.31■□□□□ 0.36
GAPDH-208ENST00000474249 C6orf229H3BNL8 230 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 ZNF853P0CG23 659 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 ZNF280AP59817 542 aaPredicted RBP17.3■□□□□ 0.36
GAPDH-208ENST00000474249 KIF23Q02241 960 aaPredicted RBP17.3■□□□□ 0.36
GAPDH-208ENST00000474249 CCDC146Q8IYE0 955 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 CCDC102AQ96A19 550 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 GMLQ99445 158 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 HYPKQ9NX55 129 aa17.3■□□□□ 0.36
GAPDH-208ENST00000474249 IRS4O14654 1257 aaPredicted RBP17.29■□□□□ 0.36
GAPDH-208ENST00000474249 NEUROD2Q15784 382 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 C2orf69Q8N8R5 385 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 RUNDC1Q96C34 613 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 DCPSQ96C86 337 aaKnown RBP17.29■□□□□ 0.36
GAPDH-208ENST00000474249 CFAP44Q96MT7 982 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 CSRNP1Q96S65 589 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 EYA3Q99504 573 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 SEC31BQ9NQW1 1179 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 RNF186Q9NXI6 227 aa17.29■□□□□ 0.36
GAPDH-208ENST00000474249 SLC10A3P09131 477 aa17.28■□□□□ 0.36
GAPDH-208ENST00000474249 RTL5Q5HYW3 569 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-208ENST00000474249 RBM26Q5T8P6 1007 aaKnown RBP17.28■□□□□ 0.36
GAPDH-208ENST00000474249 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
GAPDH-208ENST00000474249 ZBTB38Q8NAP3 1195 aaPredicted RBP17.28■□□□□ 0.36
GAPDH-208ENST00000474249 PDE4DIPQ5VU43 2346 aa17.28■□□□□ 0.36
GAPDH-208ENST00000474249 KIF4BQ2VIQ3 1234 aa17.27■□□□□ 0.36
GAPDH-208ENST00000474249 ZNF157P51786 506 aaPredicted RBP17.26■□□□□ 0.35
GAPDH-208ENST00000474249 ZC3H12CQ9C0D7 883 aaKnown RBP17.26■□□□□ 0.35
GAPDH-208ENST00000474249 PHAXQ9H814 394 aaKnown RBP17.26■□□□□ 0.35
GAPDH-208ENST00000474249 MBIPQ9NS73 344 aa17.26■□□□□ 0.35
GAPDH-208ENST00000474249 ADAMTS8Q9UP79 889 aa17.26■□□□□ 0.35
GAPDH-208ENST00000474249 LAS1LQ9Y4W2 734 aaKnown RBP17.26■□□□□ 0.35
GAPDH-208ENST00000474249 TRPA1O75762 1119 aa17.25■□□□□ 0.35
GAPDH-208ENST00000474249 AGBL3Q8NEM8 1001 aa17.25■□□□□ 0.35
GAPDH-208ENST00000474249 CDCA5Q96FF9 252 aa17.25■□□□□ 0.35
GAPDH-208ENST00000474249 GGA3Q9NZ52 723 aa17.25■□□□□ 0.35
GAPDH-208ENST00000474249 MYBBP1AQ9BQG0 1328 aaKnown RBP17.25■□□□□ 0.35
GAPDH-208ENST00000474249 PCCAP05165 728 aaPredicted RBP17.24■□□□□ 0.35
GAPDH-208ENST00000474249 SCARF1Q14162 830 aa17.24■□□□□ 0.35
GAPDH-208ENST00000474249 RSBN1LQ6PCB5 846 aaPredicted RBP17.24■□□□□ 0.35
GAPDH-208ENST00000474249 PSME4Q14997 1843 aa17.24■□□□□ 0.35
GAPDH-208ENST00000474249 WTIPA6NIX2 430 aaPredicted RBP17.23■□□□□ 0.35
GAPDH-208ENST00000474249 SULF1Q8IWU6 871 aa17.23■□□□□ 0.35
GAPDH-208ENST00000474249 CCDC191Q8NCU4 936 aa17.23■□□□□ 0.35
GAPDH-208ENST00000474249 UFL1O94874 794 aa17.22■□□□□ 0.35
GAPDH-208ENST00000474249 ANGEL2Q5VTE6 544 aaKnown RBP17.22■□□□□ 0.35
GAPDH-208ENST00000474249 GGA1Q9UJY5 639 aa17.22■□□□□ 0.35
GAPDH-208ENST00000474249 AKAP11Q9UKA4 1901 aa17.22■□□□□ 0.35
GAPDH-208ENST00000474249 PDE8AO60658 829 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 FKBP1BP68106 108 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 RIC3Q7Z5B4 369 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 RASAL3Q86YV0 1011 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 REM2Q8IYK8 340 aaPredicted RBP17.21■□□□□ 0.35
GAPDH-208ENST00000474249 ANKIB1Q9P2G1 1089 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 PITPNM2Q9BZ72 1349 aa17.21■□□□□ 0.35
GAPDH-208ENST00000474249 USP17L8P0C7I0 530 aa17.21■□□□□ 0.34
GAPDH-208ENST00000474249 PODNQ7Z5L7 613 aa17.21■□□□□ 0.34
GAPDH-208ENST00000474249 MYD88Q99836 296 aa17.21■□□□□ 0.34
GAPDH-208ENST00000474249 MYOZ2Q9NPC6 264 aa17.21■□□□□ 0.34
GAPDH-208ENST00000474249 HTTP42858 3142 aa17.2■□□□□ 0.34
GAPDH-208ENST00000474249 ZNF646O15015 1829 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-208ENST00000474249 HSP90B1P14625 803 aaKnown RBP17.2■□□□□ 0.34
GAPDH-208ENST00000474249 CCDC152Q4G0S7 254 aa17.2■□□□□ 0.34
GAPDH-208ENST00000474249 C8orf58Q8NAV2 365 aa17.2■□□□□ 0.34
GAPDH-208ENST00000474249 JARID2Q92833 1246 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-208ENST00000474249 METTL22Q9BUU2 404 aaPredicted RBP17.2■□□□□ 0.34
GAPDH-208ENST00000474249 XDHP47989 1333 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 MKI67P46013 3256 aaKnown RBP17.19■□□□□ 0.34
GAPDH-208ENST00000474249 ATP2B4P23634 1241 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 GOLGA2Q08379 1002 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 MOB2Q70IA6 237 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 IFT57Q9NWB7 429 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 PCDH10Q9P2E7 1040 aa17.19■□□□□ 0.34
GAPDH-208ENST00000474249 PAPPA2Q9BXP8 1791 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 USP17L3A6NCW0 530 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 USP17L4A6NCW7 530 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 IGKV5-2P06315 115 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 DACT2Q5SW24 774 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 USP17L1Q7RTZ2 530 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 CTU1Q7Z7A3 348 aaKnown RBP17.18■□□□□ 0.34
GAPDH-208ENST00000474249 TTLL11Q8NHH1 800 aa17.18■□□□□ 0.34
GAPDH-208ENST00000474249 CWC25Q9NXE8 425 aaPredicted RBP17.18■□□□□ 0.34
GAPDH-208ENST00000474249 SCAF8Q9UPN6 1271 aaKnown RBP17.18■□□□□ 0.34
GAPDH-208ENST00000474249 ELL2O00472 640 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-208ENST00000474249 TM4SF4P48230 202 aa17.17■□□□□ 0.34
GAPDH-208ENST00000474249 SOX10P56693 466 aa17.17■□□□□ 0.34
GAPDH-208ENST00000474249 NBPF9Q3BBW0 867 aa17.17■□□□□ 0.34
GAPDH-208ENST00000474249 CCDC85AQ96PX6 553 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-208ENST00000474249 BSDC1Q9NW68 430 aaPredicted RBP17.17■□□□□ 0.34
GAPDH-208ENST00000474249 MINPP1Q9UNW1 487 aa17.17■□□□□ 0.34
GAPDH-208ENST00000474249 CENPFP49454 3210 aa17.16■□□□□ 0.34
GAPDH-208ENST00000474249 DDX10Q13206 875 aaKnown RBP17.16■□□□□ 0.34
GAPDH-208ENST00000474249 WDR43Q15061 677 aaKnown RBP eCLIP17.16■□□□□ 0.34
GAPDH-208ENST00000474249 NOM1Q5C9Z4 860 aaKnown RBP17.16■□□□□ 0.34
GAPDH-208ENST00000474249 ANKRD18AQ8IVF6 992 aa17.16■□□□□ 0.34
GAPDH-208ENST00000474249 MED23Q9ULK4 1368 aa17.15■□□□□ 0.34
GAPDH-208ENST00000474249 G3V3G9 751 aa17.15■□□□□ 0.34
GAPDH-208ENST00000474249 UBE2Q2LH0YL09 131 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms