RNA–Protein interactions for RNA: ENST00000474190.1

CASC3-204, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 3

Gene CASC3, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-204ENST00000474190 DALRD3Q5D0E6 543 aaKnown RBP12.94□□□□□ -0.34
CASC3-204ENST00000474190 SP8Q8IXZ3 490 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 CHMP3Q9Y3E7 222 aa12.94□□□□□ -0.34
CASC3-204ENST00000474190 TAF1P21675 1872 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 EYA2O00167 538 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 CIAO1O76071 339 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 GPSM2P81274 684 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 HDAC1Q13547 482 aaPredicted RBP12.93□□□□□ -0.34
CASC3-204ENST00000474190 AAMPQ13685 434 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 ANKRD18AQ8IVF6 992 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 CDC5LQ99459 802 aaKnown RBP12.93□□□□□ -0.34
CASC3-204ENST00000474190 PODXL2Q9NZ53 605 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 HDAC5Q9UQL6 1122 aa12.93□□□□□ -0.34
CASC3-204ENST00000474190 LRRC37AA6NMS7 1700 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 CHRNDQ07001 517 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 LTBP1Q14766 1721 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 LDHAL6AQ6ZMR3 332 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 RTFDC1Q9BY42 306 aaPredicted RBP12.92□□□□□ -0.34
CASC3-204ENST00000474190 CHMP4BQ9H444 224 aaKnown RBP12.92□□□□□ -0.34
CASC3-204ENST00000474190 DCTPP1Q9H773 170 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 POLLQ9UGP5 575 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 BCS1LQ9Y276 419 aa12.92□□□□□ -0.34
CASC3-204ENST00000474190 FGFR2P21802 821 aa12.91□□□□□ -0.34
CASC3-204ENST00000474190 KLRK1P26718 216 aa12.91□□□□□ -0.34
CASC3-204ENST00000474190 HELBQ8NG08 1087 aaPredicted RBP12.91□□□□□ -0.34
CASC3-204ENST00000474190 SIL1Q9H173 461 aa12.91□□□□□ -0.34
CASC3-204ENST00000474190 ZNF219Q9P2Y4 722 aaPredicted RBP12.91□□□□□ -0.34
CASC3-204ENST00000474190 FBXO3Q9UK99 471 aa12.91□□□□□ -0.34
CASC3-204ENST00000474190 COL4A5P29400 1685 aa12.91□□□□□ -0.34
CASC3-204ENST00000474190 TAF5LO75529 589 aa12.9□□□□□ -0.34
CASC3-204ENST00000474190 IGHMBP2P38935 993 aaKnown RBP12.9□□□□□ -0.34
CASC3-204ENST00000474190 TMC4Q7Z404 712 aa12.9□□□□□ -0.34
CASC3-204ENST00000474190 TXNRD3Q86VQ6 643 aa12.9□□□□□ -0.34
CASC3-204ENST00000474190 GPR101Q96P66 508 aaPredicted RBP12.9□□□□□ -0.34
CASC3-204ENST00000474190 GPBP1L1Q9HC44 474 aaPredicted RBP12.9□□□□□ -0.34
CASC3-204ENST00000474190 EXOC6BQ9Y2D4 811 aa12.9□□□□□ -0.34
CASC3-204ENST00000474190 KDM2BQ8NHM5 1336 aa12.89□□□□□ -0.35
CASC3-204ENST00000474190 TFCP2Q12800 502 aa12.89□□□□□ -0.35
CASC3-204ENST00000474190 TBC1D16Q8TBP0 767 aa12.89□□□□□ -0.35
CASC3-204ENST00000474190 ZNF526Q8TF50 670 aaPredicted RBP12.89□□□□□ -0.35
CASC3-204ENST00000474190 MYH3P11055 1940 aa12.89□□□□□ -0.35
CASC3-204ENST00000474190 LTBP3Q9NS15 1303 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 GRIN3BO60391 1043 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 SURF6O75683 361 aaKnown RBP12.88□□□□□ -0.35
CASC3-204ENST00000474190 PDE8BO95263 885 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 IL15P40933 162 aaPredicted RBP12.88□□□□□ -0.35
CASC3-204ENST00000474190 RASSF7Q02833 373 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 SMC5Q8IY18 1101 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 PSMD1Q99460 953 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 MPHOSPH8Q99549 860 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 MROH5Q6ZUA9 1318 aa12.88□□□□□ -0.35
CASC3-204ENST00000474190 CCDC93Q567U6 631 aa12.87□□□□□ -0.35
CASC3-204ENST00000474190 CC2D2BQ6DHV5 1058 aa12.87□□□□□ -0.35
CASC3-204ENST00000474190 C15orf52Q6ZUT6 534 aaKnown RBP12.87□□□□□ -0.35
CASC3-204ENST00000474190 MPNDQ8N594 471 aa12.87□□□□□ -0.35
CASC3-204ENST00000474190 CNNM1Q9NRU3 951 aa12.87□□□□□ -0.35
CASC3-204ENST00000474190 XDHP47989 1333 aa12.87□□□□□ -0.35
CASC3-204ENST00000474190 FKBP4Q02790 459 aaKnown RBP eCLIP12.86□□□□□ -0.35
CASC3-204ENST00000474190 RHPN1Q8TCX5 695 aa12.86□□□□□ -0.35
CASC3-204ENST00000474190 EAF2Q96CJ1 260 aaPredicted RBP12.86□□□□□ -0.35
CASC3-204ENST00000474190 NSFL1CQ9UNZ2 370 aaKnown RBP12.86□□□□□ -0.35
CASC3-204ENST00000474190 HMMRO75330 724 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 ADORA1P30542 326 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 TAF7LQ5H9L4 462 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 METTL24Q5JXM2 366 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 RTKN2Q8IZC4 609 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 ANKRD2Q9GZV1 360 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 GPR108Q9NPR9 543 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 ZNF277Q9NRM2 450 aaPredicted RBP12.85□□□□□ -0.35
CASC3-204ENST00000474190 TLR7Q9NYK1 1049 aaKnown RBP12.85□□□□□ -0.35
CASC3-204ENST00000474190 LEMD3Q9Y2U8 911 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 ZNF804BA4D1E1 1349 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 SALL3Q9BXA9 1300 aa12.85□□□□□ -0.35
CASC3-204ENST00000474190 SMARCA5O60264 1052 aaPredicted RBP12.84□□□□□ -0.35
CASC3-204ENST00000474190 UFL1O94874 794 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 ATP2B4P23634 1241 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 TIMM10P62072 90 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 KIAA2012Q0VF49 1180 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 G3BP1Q13283 466 aaKnown RBP eCLIP12.84□□□□□ -0.35
CASC3-204ENST00000474190 UBE4AQ14139 1066 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 TNNI3KQ59H18 835 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 SOGA3Q5TF21 947 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 ERICH6BQ5W0A0 696 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 DPP8Q6V1X1 898 aaPredicted RBP12.84□□□□□ -0.35
CASC3-204ENST00000474190 OTUD7AQ8TE49 926 aaPredicted RBP12.84□□□□□ -0.35
CASC3-204ENST00000474190 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
CASC3-204ENST00000474190 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 FPGT-TNNI3KV9GXZ4 949 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 ZNF609O15014 1411 aa12.84□□□□□ -0.35
CASC3-204ENST00000474190 ARFGEF1Q9Y6D6 1849 aa12.83□□□□□ -0.35
CASC3-204ENST00000474190 YDJCA8MPS7 323 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 RAB11FIP3O75154 756 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 PUM3Q15397 648 aaKnown RBP12.83□□□□□ -0.36
CASC3-204ENST00000474190 GRIPAP1Q4V328 841 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 FBXO33Q7Z6M2 555 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 C16orf71Q8IYS4 520 aaPredicted RBP12.83□□□□□ -0.36
CASC3-204ENST00000474190 TAOK3Q9H2K8 898 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 IL1RAPL2Q9NP60 686 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 ANKIB1Q9P2G1 1089 aa12.83□□□□□ -0.36
CASC3-204ENST00000474190 CEP126Q9P2H0 1117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms