RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 CLEC11AQ9Y240 323 aa12.16□□□□□ -0.46
APTX-216ENST00000472896 PRPF40AO75400 957 aaKnown RBP12.15□□□□□ -0.46
APTX-216ENST00000472896 A1BGP04217 495 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 TPM3P06753 285 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 FKBP5Q13451 457 aaPredicted RBP12.15□□□□□ -0.46
APTX-216ENST00000472896 ATP2B3Q16720 1220 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 DEFB115Q30KQ5 88 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 TBC1D9Q6ZT07 1266 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 MASTLQ96GX5 879 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 ZNF330Q9Y3S2 320 aaPredicted RBP12.15□□□□□ -0.46
APTX-216ENST00000472896 RASSF10A6NK89 507 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 CAMTA2O94983 1202 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 TRIM27P14373 513 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 SYCP1Q15431 976 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 MAP1SQ66K74 1059 aaPredicted RBP12.15□□□□□ -0.46
APTX-216ENST00000472896 CNTROBQ8N137 903 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 ANKRD7Q92527 254 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 CFAP53Q96M91 514 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 SETDB2Q96T68 719 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 ZNF277Q9NRM2 450 aaPredicted RBP12.15□□□□□ -0.46
APTX-216ENST00000472896 SMC4Q9NTJ3 1288 aa12.15□□□□□ -0.46
APTX-216ENST00000472896 EPHX2P34913 555 aa12.14□□□□□ -0.47
APTX-216ENST00000472896 FMR1Q06787 632 aaKnown RBP eCLIP12.14□□□□□ -0.47
APTX-216ENST00000472896 CHAF1AQ13111 956 aaPredicted RBP12.14□□□□□ -0.47
APTX-216ENST00000472896 CNBD1Q8NA66 436 aa12.14□□□□□ -0.47
APTX-216ENST00000472896 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
APTX-216ENST00000472896 TMEM63CQ9P1W3 806 aa12.14□□□□□ -0.47
APTX-216ENST00000472896 IL16Q14005 1332 aa12.14□□□□□ -0.47
APTX-216ENST00000472896 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
APTX-216ENST00000472896 SCN4AP35499 1836 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 SYCE3A1L190 88 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 IL17REQ8NFR9 667 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 LNPKQ9C0E8 428 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 HACL1Q9UJ83 578 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 CACNA1SQ13698 1873 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 UBR2Q8IWV8 1755 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 KCNQ3O43525 872 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 IL6STP40189 918 aaPredicted RBP12.13□□□□□ -0.47
APTX-216ENST00000472896 FAM193AP78312 1265 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 SLC20A2Q08357 652 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 SOGA3Q5TF21 947 aa12.13□□□□□ -0.47
APTX-216ENST00000472896 RBM27Q9P2N5 1060 aaKnown RBP12.13□□□□□ -0.47
APTX-216ENST00000472896 HEG1Q9ULI3 1381 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 CCDC85CA6NKD9 419 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 ST18O60284 1047 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 FKBP4Q02790 459 aaKnown RBP eCLIP12.12□□□□□ -0.47
APTX-216ENST00000472896 CCDC93Q567U6 631 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 TTC5Q8N0Z6 440 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 ADAMTSL1Q8N6G6 1762 aa12.12□□□□□ -0.47
APTX-216ENST00000472896 CCDC66A2RUB6 948 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 NPHP1O15259 732 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 CTIFO43310 598 aaKnown RBP12.11□□□□□ -0.47
APTX-216ENST00000472896 PIP4K2AP48426 406 aaPredicted RBP12.11□□□□□ -0.47
APTX-216ENST00000472896 RGS19P49795 217 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 ST5P78524 1137 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 NEUROD2Q15784 382 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 ALDH1L2Q3SY69 923 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 TAF7LQ5H9L4 462 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 ZNF790Q6PG37 636 aa12.11□□□□□ -0.47
APTX-216ENST00000472896 RRP7AQ9Y3A4 280 aaKnown RBP12.11□□□□□ -0.47
APTX-216ENST00000472896 FZD9O00144 591 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 MAP2K1Q02750 393 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 SYNE4Q8N205 404 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 TMEM57Q8N5G2 664 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 TEX13AQ9BXU3 409 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 ABT1Q9ULW3 272 aaKnown RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 SCN7AQ01118 1682 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 KLRG2A4D1S0 409 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 CDK11BP21127 795 aaKnown RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 BRPF1P55201 1214 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 MLLT1Q03111 559 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 ZNF771Q7L3S4 317 aaPredicted RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 DZIP3Q86Y13 1208 aaKnown RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 CREBRFQ8IUR6 639 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 ZNF428Q96B54 188 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 NOB1Q9ULX3 412 aaKnown RBP12.1□□□□□ -0.47
APTX-216ENST00000472896 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
APTX-216ENST00000472896 NPR1P16066 1061 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 ANKRD45Q5TZF3 282 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 PNMA8AQ86V59 439 aaPredicted RBP12.09□□□□□ -0.47
APTX-216ENST00000472896 NBPF5PQ86XG9 351 aaPredicted RBP12.09□□□□□ -0.47
APTX-216ENST00000472896 SSH1Q8WYL5 1049 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 DDX21Q9NR30 783 aaKnown RBP eCLIP12.09□□□□□ -0.47
APTX-216ENST00000472896 TSKSQ9UJT2 592 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 TAOK2Q9UL54 1235 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 ARFGEF2Q9Y6D5 1785 aa12.09□□□□□ -0.47
APTX-216ENST00000472896 PRAMEF22A3QJZ6 481 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 IARSP41252 1262 aaKnown RBP12.08□□□□□ -0.48
APTX-216ENST00000472896 MCM2P49736 904 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 CST9Q5W186 159 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 CYP4F22Q6NT55 531 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 CAPNS2Q96L46 248 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 ZDHHC9Q9Y397 364 aa12.08□□□□□ -0.48
APTX-216ENST00000472896 EXOSC9Q06265 439 aaKnown RBP12.07□□□□□ -0.48
APTX-216ENST00000472896 RTKN2Q8IZC4 609 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 FMNL2Q96PY5 1086 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 USP26Q9BXU7 913 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 DIAPH1O60610 1272 aaKnown RBP12.07□□□□□ -0.48
APTX-216ENST00000472896 EPS15P42566 896 aa12.07□□□□□ -0.48
APTX-216ENST00000472896 TEFQ10587 303 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms