RNA–Protein interactions for RNA: ENST00000472096.1

CALD1-215, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 651 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-215ENST00000472096 TOMM70O94826 608 aa19.11■□□□□ 0.65
CALD1-215ENST00000472096 DDNO94850 711 aaPredicted RBP19.11■□□□□ 0.65
CALD1-215ENST00000472096 AOC3Q16853 763 aa19.11■□□□□ 0.65
CALD1-215ENST00000472096 VPS33BQ9H267 617 aa19.11■□□□□ 0.65
CALD1-215ENST00000472096 GREM2Q9H772 168 aa19.11■□□□□ 0.65
CALD1-215ENST00000472096 SMC4Q9NTJ3 1288 aa19.11■□□□□ 0.65
CALD1-215ENST00000472096 PSME4Q14997 1843 aa19.1■□□□□ 0.65
CALD1-215ENST00000472096 VEGFAP15692 232 aaPredicted RBP19.1■□□□□ 0.65
CALD1-215ENST00000472096 NUBP1P53384 320 aa19.1■□□□□ 0.65
CALD1-215ENST00000472096 NIM1KQ8IY84 436 aa19.1■□□□□ 0.65
CALD1-215ENST00000472096 C16orf71Q8IYS4 520 aaPredicted RBP19.1■□□□□ 0.65
CALD1-215ENST00000472096 SRCIN1Q9C0H9 1055 aa19.1■□□□□ 0.65
CALD1-215ENST00000472096 POTECB2RU33 542 aa19.09■□□□□ 0.65
CALD1-215ENST00000472096 GRM8O00222 908 aa19.09■□□□□ 0.65
CALD1-215ENST00000472096 GPSM2P81274 684 aa19.09■□□□□ 0.65
CALD1-215ENST00000472096 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
CALD1-215ENST00000472096 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
CALD1-215ENST00000472096 L3MBTL3Q96JM7 780 aaPredicted RBP19.09■□□□□ 0.65
CALD1-215ENST00000472096 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
CALD1-215ENST00000472096 NSFL1CQ9UNZ2 370 aaKnown RBP19.09■□□□□ 0.65
CALD1-215ENST00000472096 FAM161AQ3B820 660 aa19.08■□□□□ 0.64
CALD1-215ENST00000472096 CHRDL2Q6WN34 429 aa19.08■□□□□ 0.64
CALD1-215ENST00000472096 RBM46Q8TBY0 533 aaKnown RBP19.08■□□□□ 0.64
CALD1-215ENST00000472096 ADAMTSL1Q8N6G6 1762 aa19.08■□□□□ 0.64
CALD1-215ENST00000472096 SCN9AQ15858 1988 aa19.08■□□□□ 0.64
CALD1-215ENST00000472096 ECM2O94769 699 aaPredicted RBP19.07■□□□□ 0.64
CALD1-215ENST00000472096 CSF1RP07333 972 aa19.07■□□□□ 0.64
CALD1-215ENST00000472096 EIF6P56537 245 aaKnown RBP19.07■□□□□ 0.64
CALD1-215ENST00000472096 ZBED9Q6R2W3 1325 aa19.06■□□□□ 0.64
CALD1-215ENST00000472096 GPC2Q8N158 579 aa19.06■□□□□ 0.64
CALD1-215ENST00000472096 PODXL2Q9NZ53 605 aa19.06■□□□□ 0.64
CALD1-215ENST00000472096 C9orf78Q9NZ63 289 aaPredicted RBP19.06■□□□□ 0.64
CALD1-215ENST00000472096 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
CALD1-215ENST00000472096 ITGA6P23229 1130 aa19.05■□□□□ 0.64
CALD1-215ENST00000472096 RARSP54136 660 aaKnown RBP19.05■□□□□ 0.64
CALD1-215ENST00000472096 BRPF1P55201 1214 aaPredicted RBP19.05■□□□□ 0.64
CALD1-215ENST00000472096 FOXO4P98177 505 aa19.05■□□□□ 0.64
CALD1-215ENST00000472096 TBC1D16Q8TBP0 767 aa19.05■□□□□ 0.64
CALD1-215ENST00000472096 UTYO14607 1347 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 XDHP47989 1333 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 IQCA1LA6NCM1 817 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 C6orf229H3BNL8 230 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 BSDC1Q9NW68 430 aaPredicted RBP19.04■□□□□ 0.64
CALD1-215ENST00000472096 ANKIB1Q9P2G1 1089 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 ZNRF3Q9ULT6 936 aa19.04■□□□□ 0.64
CALD1-215ENST00000472096 ZNF646O15015 1829 aaPredicted RBP19.04■□□□□ 0.64
CALD1-215ENST00000472096 UFL1O94874 794 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 IGHMBP2P38935 993 aaKnown RBP19.03■□□□□ 0.64
CALD1-215ENST00000472096 FXR2P51116 673 aaKnown RBP eCLIP19.03■□□□□ 0.642e-7■■□□□ 14.1
CALD1-215ENST00000472096 WASHC4Q2M389 1173 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 EPHA10Q5JZY3 1008 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 GPR101Q96P66 508 aaPredicted RBP19.03■□□□□ 0.64
CALD1-215ENST00000472096 EYA3Q99504 573 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 GGA1Q9UJY5 639 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 GJA3Q9Y6H8 435 aa19.03■□□□□ 0.64
CALD1-215ENST00000472096 KIF16BQ96L93 1317 aa19.02■□□□□ 0.64
CALD1-215ENST00000472096 NBPF7P0C2Y1 421 aaPredicted RBP19.02■□□□□ 0.64
CALD1-215ENST00000472096 PRKAR2AP13861 404 aaKnown RBP19.02■□□□□ 0.64
CALD1-215ENST00000472096 HSPA6P17066 643 aa19.02■□□□□ 0.64
CALD1-215ENST00000472096 FSTL1Q12841 308 aa19.02■□□□□ 0.64
CALD1-215ENST00000472096 SMC1BQ8NDV3 1235 aa19.02■□□□□ 0.64
CALD1-215ENST00000472096 NOB1Q9ULX3 412 aaKnown RBP19.02■□□□□ 0.64
CALD1-215ENST00000472096 ANKRD18BA2A2Z9 1011 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 YDJCA8MPS7 323 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 RIMBP2O15034 1052 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 CXCL9Q07325 125 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 LMBR1LQ6UX01 489 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 SUCLG2Q96I99 432 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 TAF1DQ9H5J8 278 aaPredicted RBP19.01■□□□□ 0.63
CALD1-215ENST00000472096 HACL1Q9UJ83 578 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 MINPP1Q9UNW1 487 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 CHMP3Q9Y3E7 222 aa19.01■□□□□ 0.63
CALD1-215ENST00000472096 SCNN1DP51172 638 aa19■□□□□ 0.63
CALD1-215ENST00000472096 IFIT5Q13325 482 aaKnown RBP19■□□□□ 0.63
CALD1-215ENST00000472096 KAZALD1Q96I82 304 aa19■□□□□ 0.63
CALD1-215ENST00000472096 API5Q9BZZ5 524 aaKnown RBP19■□□□□ 0.63
CALD1-215ENST00000472096 DBNDD1Q9H9R9 158 aa19■□□□□ 0.63
CALD1-215ENST00000472096 ECE2O60344 883 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 POTEIP0CG38 1075 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 POTEJP0CG39 1038 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 ATP2B4P23634 1241 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 CIAPIN1Q6FI81 312 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 MPHOSPH8Q99549 860 aa18.99■□□□□ 0.63
CALD1-215ENST00000472096 MED23Q9ULK4 1368 aa18.98■□□□□ 0.63
CALD1-215ENST00000472096 RAD17O75943 681 aa18.98■□□□□ 0.63
CALD1-215ENST00000472096 LMOD1P29536 600 aaPredicted RBP18.98■□□□□ 0.63
CALD1-215ENST00000472096 EPHX2P34913 555 aa18.98■□□□□ 0.63
CALD1-215ENST00000472096 CCT4P50991 539 aaKnown RBP18.98■□□□□ 0.63
CALD1-215ENST00000472096 DCAF8Q5TAQ9 597 aa18.98■□□□□ 0.63
CALD1-215ENST00000472096 DOK7Q18PE1 504 aa18.97■□□□□ 0.63
CALD1-215ENST00000472096 CCDC57Q2TAC2 916 aa18.97■□□□□ 0.63
CALD1-215ENST00000472096 ZC3H12CQ9C0D7 883 aaKnown RBP18.97■□□□□ 0.63
CALD1-215ENST00000472096 USP44Q9H0E7 712 aa18.97■□□□□ 0.63
CALD1-215ENST00000472096 BICC1Q9H694 974 aaKnown RBP18.97■□□□□ 0.63
CALD1-215ENST00000472096 TNIP1Q15025 636 aa18.96■□□□□ 0.63
CALD1-215ENST00000472096 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
CALD1-215ENST00000472096 LDHDQ86WU2 507 aa18.96■□□□□ 0.63
CALD1-215ENST00000472096 RASEFQ8IZ41 740 aa18.96■□□□□ 0.63
CALD1-215ENST00000472096 ANKRD44Q8N8A2 993 aa18.96■□□□□ 0.63
CALD1-215ENST00000472096 ARHGAP45Q92619 1136 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms