RNA–Protein interactions for RNA: ENST00000471261.2

PPP1R3F-204, Transcript of protein phosphatase 1 regulatory subunit 3F, humanhuman

TSL 3

Gene PPP1R3F, Length 503 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP1R3F-204ENST00000471261 MPHOSPH8Q99549 860 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 TAF1DQ9H5J8 278 aaPredicted RBP15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 DBNDD1Q9H9R9 158 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 PODXL2Q9NZ53 605 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 DUOX1Q9NRD9 1551 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 XDHP47989 1333 aa15.94■□□□□ 0.14
PPP1R3F-204ENST00000471261 G3V3G9 751 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 POTEIP0CG38 1075 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 POTEJP0CG39 1038 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 EPHX2P34913 555 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 RARSP54136 660 aaKnown RBP15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 CXCL9Q07325 125 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 IFIT5Q13325 482 aaKnown RBP15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 DOK7Q18PE1 504 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 DCAF8Q5TAQ9 597 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 LMBR1LQ6UX01 489 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 ZC3H12CQ9C0D7 883 aaKnown RBP15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 MINPP1Q9UNW1 487 aa15.93■□□□□ 0.14
PPP1R3F-204ENST00000471261 NBPF7P0C2Y1 421 aaPredicted RBP15.92■□□□□ 0.14
PPP1R3F-204ENST00000471261 CCDC57Q2TAC2 916 aa15.92■□□□□ 0.14
PPP1R3F-204ENST00000471261 TAF7LQ5H9L4 462 aa15.92■□□□□ 0.14
PPP1R3F-204ENST00000471261 EPHA10Q5JZY3 1008 aa15.92■□□□□ 0.14
PPP1R3F-204ENST00000471261 CIAPIN1Q6FI81 312 aa15.92■□□□□ 0.14
PPP1R3F-204ENST00000471261 YDJCA8MPS7 323 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 ECE2O60344 883 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 ATP2B4P23634 1241 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 SCNN1DP51172 638 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 TNIP1Q15025 636 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 SUCLG2Q96I99 432 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 MYH3P11055 1940 aa15.91■□□□□ 0.14
PPP1R3F-204ENST00000471261 WTIPA6NIX2 430 aaPredicted RBP15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 EPS15P42566 896 aa15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 GMPSP49915 693 aaPredicted RBP15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 APLP1P51693 650 aa15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 CHADLQ6NUI6 762 aa15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 LDHDQ86WU2 507 aa15.9■□□□□ 0.14
PPP1R3F-204ENST00000471261 KCNJ4P48050 445 aa15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 CCT4P50991 539 aaKnown RBP15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 API5Q9BZZ5 524 aaKnown RBP15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 BICC1Q9H694 974 aaKnown RBP15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 UTYO14607 1347 aa15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 KIF16BQ96L93 1317 aa15.89■□□□□ 0.13
PPP1R3F-204ENST00000471261 LTBP1Q14766 1721 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 PSMD14O00487 310 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 FRAT1Q92837 279 aaPredicted RBP15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 KAZALD1Q96I82 304 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 ANKRD2Q9GZV1 360 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 KCNQ5Q9NR82 932 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 GPRC5DQ9NZD1 345 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 ZBED9Q6R2W3 1325 aa15.88■□□□□ 0.13
PPP1R3F-204ENST00000471261 SCN4AP35499 1836 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 SPEF2Q9C093 1822 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 BCAR3O75815 825 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 HTRA3P83110 453 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 CHRNDQ07001 517 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 LDHAL6AQ6ZMR3 332 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 HELBQ8NG08 1087 aaPredicted RBP15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 USP44Q9H0E7 712 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 LEMD3Q9Y2U8 911 aa15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 ZBTB12Q9Y330 459 aaPredicted RBP15.87■□□□□ 0.13
PPP1R3F-204ENST00000471261 PLIN1O60240 522 aa15.86■□□□□ 0.13
PPP1R3F-204ENST00000471261 TAF5LO75529 589 aa15.86■□□□□ 0.13
PPP1R3F-204ENST00000471261 CNNM1Q9NRU3 951 aa15.86■□□□□ 0.13
PPP1R3F-204ENST00000471261 ZNF804BA4D1E1 1349 aa15.86■□□□□ 0.13
PPP1R3F-204ENST00000471261 IPO8O15397 1037 aaKnown RBP15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 MAP1SQ66K74 1059 aaPredicted RBP15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 MICALL2Q8IY33 904 aa15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 ADARB2Q9NS39 739 aaKnown RBP15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 MED23Q9ULK4 1368 aa15.85■□□□□ 0.13
PPP1R3F-204ENST00000471261 SHTN1A0MZ66 631 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 H7C1D1 291 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 SNAP23O00161 211 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 UBTFL1P0CB47 393 aaPredicted RBP15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 KLRK1P26718 216 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 USP50Q70EL3 339 aaPredicted RBP15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 ANKRD44Q8N8A2 993 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 ARHGAP45Q92619 1136 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 FBXW7Q969H0 707 aa15.84■□□□□ 0.13
PPP1R3F-204ENST00000471261 RABL6Q3YEC7 729 aaPredicted RBP15.83■□□□□ 0.12
PPP1R3F-204ENST00000471261 PODNQ7Z5L7 613 aa15.83■□□□□ 0.12
PPP1R3F-204ENST00000471261 TXNRD3Q86VQ6 643 aa15.83■□□□□ 0.12
PPP1R3F-204ENST00000471261 CNTROBQ8N137 903 aa15.83■□□□□ 0.12
PPP1R3F-204ENST00000471261 VIL1P09327 827 aaKnown RBP15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 TRIM27P14373 513 aa15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 RPS12P25398 132 aaKnown RBP15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 ATF7IPQ6VMQ6 1270 aa15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 CLUAP1Q96AJ1 413 aa15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 PUS3Q9BZE2 481 aaKnown RBP15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 COA1Q9GZY4 146 aa15.82■□□□□ 0.12
PPP1R3F-204ENST00000471261 USP17L3A6NCW0 530 aa15.81■□□□□ 0.12
PPP1R3F-204ENST00000471261 USP17L4A6NCW7 530 aa15.81■□□□□ 0.12
PPP1R3F-204ENST00000471261 USP17L1Q7RTZ2 530 aa15.81■□□□□ 0.12
PPP1R3F-204ENST00000471261 KLHDC4Q8TBB5 520 aa15.81■□□□□ 0.12
PPP1R3F-204ENST00000471261 TRPM4Q8TD43 1214 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms