RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 FKBP4Q02790 459 aaKnown RBP eCLIP9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 XKR5Q6UX68 686 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 TXNDC2Q86VQ3 553 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 CCDC87Q9NVE4 849 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 POLIQ9UNA4 740 aa9.93□□□□□ -0.82
PRPF40A-206ENST00000471167 MSTNO14793 375 aa9.92□□□□□ -0.82
PRPF40A-206ENST00000471167 MZF1P28698 734 aaPredicted RBP9.92□□□□□ -0.82
PRPF40A-206ENST00000471167 TRAPPC3LQ5T215 181 aa9.92□□□□□ -0.82
PRPF40A-206ENST00000471167 ELMSAN1Q6PJG2 1045 aa9.92□□□□□ -0.82
PRPF40A-206ENST00000471167 PLD4Q96BZ4 506 aa9.92□□□□□ -0.82
PRPF40A-206ENST00000471167 KIF4AO95239 1232 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 ABL1P00519 1130 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 SELPP16109 830 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 EIF2AK2P19525 551 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 MSL1Q68DK7 614 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 PDE12Q6L8Q7 609 aaKnown RBP9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 C1orf127Q8N9H9 656 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 CHRDQ9H2X0 955 aa9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 ABI2Q9NYB9 513 aaPredicted RBP9.91□□□□□ -0.82
PRPF40A-206ENST00000471167 ICMTO60725 284 aa9.9□□□□□ -0.82
PRPF40A-206ENST00000471167 FNDC3AQ9Y2H6 1198 aaKnown RBP9.9□□□□□ -0.82
PRPF40A-206ENST00000471167 DEAF1O75398 565 aaPredicted RBP9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 ATP11AP98196 1134 aa9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 SF3B2Q13435 895 aaKnown RBP9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 SHISA2Q6UWI4 295 aa9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 CEP120Q8N960 986 aa9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 TRIM33Q9UPN9 1127 aa9.89□□□□□ -0.83
PRPF40A-206ENST00000471167 FAM13AO94988 1023 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 ACPPP15309 386 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 ARID4AP29374 1257 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 ARHGAP4P98171 946 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 TRIM28Q13263 835 aaKnown RBP9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 FMR1NBQ8N0W7 255 aaPredicted RBP9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 KANSL3Q9P2N6 904 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 EGFL7Q9UHF1 273 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 SALL4Q9UJQ4 1053 aa9.88□□□□□ -0.83
PRPF40A-206ENST00000471167 TTC39BQ5VTQ0 682 aaPredicted RBP9.87□□□□□ -0.83
PRPF40A-206ENST00000471167 ZNF438Q7Z4V0 828 aa9.87□□□□□ -0.83
PRPF40A-206ENST00000471167 NFKBIEO00221 500 aa9.86□□□□□ -0.83
PRPF40A-206ENST00000471167 TM4SF5O14894 197 aa9.86□□□□□ -0.83
PRPF40A-206ENST00000471167 C8orf34Q49A92 452 aa9.86□□□□□ -0.83
PRPF40A-206ENST00000471167 PRRT3Q5FWE3 981 aa9.86□□□□□ -0.83
PRPF40A-206ENST00000471167 GJD3Q8N144 294 aa9.86□□□□□ -0.83
PRPF40A-206ENST00000471167 SPDYE3A6NKU9 549 aa9.85□□□□□ -0.83
PRPF40A-206ENST00000471167 HYAL2Q12891 473 aa9.85□□□□□ -0.83
PRPF40A-206ENST00000471167 ALKBH2Q6NS38 261 aa9.85□□□□□ -0.83
PRPF40A-206ENST00000471167 RASSF4Q9H2L5 321 aa9.85□□□□□ -0.83
PRPF40A-206ENST00000471167 TRPA1O75762 1119 aa9.84□□□□□ -0.83
PRPF40A-206ENST00000471167 GHRHP01286 108 aa9.84□□□□□ -0.83
PRPF40A-206ENST00000471167 ELNP15502 786 aa9.84□□□□□ -0.83
PRPF40A-206ENST00000471167 GDF6Q6KF10 455 aaPredicted RBP9.84□□□□□ -0.83
PRPF40A-206ENST00000471167 FOXD3Q9UJU5 478 aaPredicted RBP9.84□□□□□ -0.83
PRPF40A-206ENST00000471167 H3BRB1 525 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 TNFRSF21O75509 655 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 SUZ12Q15022 739 aaKnown RBP9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 FBXO11Q86XK2 927 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 WFDC8Q8IUA0 241 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 IL22RA1Q8N6P7 574 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 HHIPQ96QV1 700 aa9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 TUT1Q9H6E5 874 aaKnown RBP9.83□□□□□ -0.84
PRPF40A-206ENST00000471167 EREGO14944 169 aa9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 IGHA2P01877 340 aa9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 ITGB7P26010 798 aa9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 LENG1Q96BZ8 264 aaPredicted RBP9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 POP1Q99575 1024 aaKnown RBP9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 MTMR7Q9Y216 660 aa9.82□□□□□ -0.84
PRPF40A-206ENST00000471167 DLL1O00548 723 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 RPLP1P05386 114 aaKnown RBP9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 FURINP09958 794 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 ADGRE1Q14246 886 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 SETDB1Q15047 1291 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 B4GALNT3Q6L9W6 998 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 PBX4Q9BYU1 374 aa9.81□□□□□ -0.84
PRPF40A-206ENST00000471167 GATA4P43694 442 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 AAMPQ13685 434 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 DOC2BQ14184 412 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 MBTPS1Q14703 1052 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 CEP135Q66GS9 1140 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 DTWD1Q8N5C7 304 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 DZANK1Q9NVP4 752 aa9.8□□□□□ -0.84
PRPF40A-206ENST00000471167 CES1P23141 567 aa9.79□□□□□ -0.84
PRPF40A-206ENST00000471167 RAC1P63000 192 aa9.79□□□□□ -0.84
PRPF40A-206ENST00000471167 GALNT11Q8NCW6 608 aa9.79□□□□□ -0.84
PRPF40A-206ENST00000471167 LACRTQ9GZZ8 138 aa9.79□□□□□ -0.84
PRPF40A-206ENST00000471167 ADAM23O75077 832 aa9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 PEAR1Q5VY43 1037 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 NCAPG2Q86XI2 1143 aa9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 GLYCTKQ8IVS8 523 aa9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 SH2B1Q9NRF2 756 aaPredicted RBP9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 LATS2Q9NRM7 1088 aa9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 TPSG1Q9NRR2 321 aa9.78□□□□□ -0.84
PRPF40A-206ENST00000471167 APBA3O96018 575 aa9.77□□□□□ -0.85
PRPF40A-206ENST00000471167 PCSK2P16519 638 aa9.77□□□□□ -0.85
PRPF40A-206ENST00000471167 SSBP4Q9BWG4 385 aaPredicted RBP9.77□□□□□ -0.85
PRPF40A-206ENST00000471167 ZFYVE28Q9HCC9 887 aa9.77□□□□□ -0.85
PRPF40A-206ENST00000471167 GNEQ9Y223 722 aaKnown RBP9.77□□□□□ -0.85
PRPF40A-206ENST00000471167 SOWAHDA6NJG2 315 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 C9orf172C9J069 976 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 LINC01387J3KSC0 135 aa9.76□□□□□ -0.85
PRPF40A-206ENST00000471167 EPHA1P21709 976 aa9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms