RNA–Protein interactions for RNA: ENST00000470886.1

RRP1B-202, Transcript of ribosomal RNA processing 1B, humanhuman

TSL 2

Gene RRP1B, Length 4,634 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RRP1B-202ENST00000470886 GOLGA8AA7E2F4 631 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 IGHMBP2P38935 993 aaKnown RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 TTC12Q9H892 705 aaPredicted RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 BMP2KQ9NSY1 1161 aaPredicted RBP12.16□□□□□ -0.46
RRP1B-202ENST00000470886 KIF4BQ2VIQ3 1234 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 ANKRD13DQ6ZTN6 518 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 CRACR2AQ9BSW2 395 aa12.16□□□□□ -0.46
RRP1B-202ENST00000470886 SGSM2O43147 1006 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 KIAA1328Q86T90 577 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 TCEAL9Q9UHQ7 104 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 FGFR1OPO95684 399 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 EIF5P55010 431 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 CCT2P78371 535 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 BRAPQ7Z569 592 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 CCDC102AQ96A19 550 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 TRMT1Q9NXH9 659 aaKnown RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 SPATA31D1Q6ZQQ2 1576 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 GOLIM4O00461 696 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 YEATS4O95619 227 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 FBLN1P23142 703 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 IL15P40933 162 aaPredicted RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 NMIQ13287 307 aaPredicted RBP12.15□□□□□ -0.46
RRP1B-202ENST00000470886 MYRIPQ8NFW9 859 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 PRDM11Q9NQV5 511 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 LRP2BPQ9P2M1 347 aa12.15□□□□□ -0.46
RRP1B-202ENST00000470886 CTAGE1Q96RT6 745 aa12.15□□□□□ -0.47
RRP1B-202ENST00000470886 ZNF287Q9HBT7 754 aa12.15□□□□□ -0.47
RRP1B-202ENST00000470886 METP08581 1390 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 HSPA4P34932 840 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 SYKP43405 635 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 ZRANB1Q9UGI0 708 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 TUBBP07437 444 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 UQCRFS1P1P0C7P4 283 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 BRD2P25440 801 aaKnown RBP12.14□□□□□ -0.47
RRP1B-202ENST00000470886 TMTC2Q8N394 836 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 TECPR2O15040 1411 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 SLC5A1P13866 664 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 GUCY1B3Q02153 619 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 Q6ZUG5 572 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 PLCD3Q8N3E9 789 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 EHBP1Q8NDI1 1231 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 ANKRD18BA2A2Z9 1011 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 HOXC9P31274 260 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 METAP2P50579 478 aaKnown RBP eCLIP12.14□□□□□ -0.47
RRP1B-202ENST00000470886 SPAG1Q07617 926 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 SPA17Q15506 151 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 EYA1Q99502 592 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 OGFRQ9NZT2 677 aa12.14□□□□□ -0.47
RRP1B-202ENST00000470886 IFIT3O14879 490 aaKnown RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 FKBP15Q5T1M5 1219 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 IQCA1Q86XH1 822 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 CCDC43Q96MW1 224 aaKnown RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 ZNF830Q96NB3 372 aaPredicted RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 DNAJC25Q9H1X3 360 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 IRX3P78415 501 aaPredicted RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 DHX32Q7L7V1 743 aaKnown RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 CTCFLQ8NI51 663 aaPredicted RBP12.13□□□□□ -0.47
RRP1B-202ENST00000470886 UBASH3AP57075 661 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 UBE3BQ7Z3V4 1068 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 PRDM10Q9NQV6 1147 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 SNX14Q9Y5W7 946 aa12.13□□□□□ -0.47
RRP1B-202ENST00000470886 IP6K1Q92551 441 aa12.12□□□□□ -0.47
RRP1B-202ENST00000470886 CNNM2Q9H8M5 875 aa12.12□□□□□ -0.47
RRP1B-202ENST00000470886 RAI14Q9P0K7 980 aa12.12□□□□□ -0.47
RRP1B-202ENST00000470886 USO1O60763 962 aaKnown RBP12.12□□□□□ -0.47
RRP1B-202ENST00000470886 ZC3H6P61129 1189 aaKnown RBP12.12□□□□□ -0.47
RRP1B-202ENST00000470886 CT47A1Q5JQC4 288 aaPredicted RBP12.12□□□□□ -0.47
RRP1B-202ENST00000470886 CCDC191Q8NCU4 936 aa12.12□□□□□ -0.47
RRP1B-202ENST00000470886 KRT18P05783 430 aaKnown RBP12.12□□□□□ -0.47
RRP1B-202ENST00000470886 CLSTN2Q9H4D0 955 aa12.12□□□□□ -0.47
RRP1B-202ENST00000470886 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP12.12□□□□□ -0.473e-8■■■■□ 26.3
RRP1B-202ENST00000470886 RPS6KB1P23443 525 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 KRT23Q9C075 422 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 HELLSQ9NRZ9 838 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 RMND1Q9NWS8 449 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 IGSF1Q8N6C5 1336 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 ITSN1Q15811 1721 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 ADGRL3Q9HAR2 1447 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 KLF18A0A0U1RQI7 1052 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 SPTLC2O15270 562 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 GSPT1P15170 499 aaKnown RBP12.11□□□□□ -0.47
RRP1B-202ENST00000470886 TAF4BQ92750 862 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 VIRMAQ69YN4 1812 aaKnown RBP12.11□□□□□ -0.47
RRP1B-202ENST00000470886 SHTN1A0MZ66 631 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 TMEM67Q5HYA8 995 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 FAM114A1Q8IWE2 563 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 OTUD7AQ8TE49 926 aaPredicted RBP12.11□□□□□ -0.47
RRP1B-202ENST00000470886 ERO1AQ96HE7 468 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 TMOD3Q9NYL9 352 aa12.11□□□□□ -0.47
RRP1B-202ENST00000470886 PTGS1P23219 599 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 FAM160A1Q05DH4 1040 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 CATIPQ7Z7H3 387 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 RGS12O14924 1447 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 GNG11P61952 73 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 CLEC17AQ6ZS10 378 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 AOPEPQ8N6M6 819 aa12.1□□□□□ -0.47
RRP1B-202ENST00000470886 TIGD1Q96MW7 591 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms