RNA–Protein interactions for RNA: ENST00000470279.1

STRC-208, Transcript of stereocilin, humanhuman

TSL 4

Gene STRC, Length 569 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STRC-208ENST00000470279 ANGEL2Q5VTE6 544 aaKnown RBP18.86■□□□□ 0.61
STRC-208ENST00000470279 FBXO46Q6PJ61 603 aaPredicted RBP18.86■□□□□ 0.61
STRC-208ENST00000470279 CELF1Q92879 486 aaKnown RBP18.86■□□□□ 0.61
STRC-208ENST00000470279 VIL1P09327 827 aaKnown RBP18.85■□□□□ 0.61
STRC-208ENST00000470279 TCIRG1Q13488 830 aa18.85■□□□□ 0.61
STRC-208ENST00000470279 EYA3Q99504 573 aa18.85■□□□□ 0.61
STRC-208ENST00000470279 PSME4Q14997 1843 aa18.85■□□□□ 0.61
STRC-208ENST00000470279 ZNF609O15014 1411 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 GPR25O00155 361 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 SCARF1Q14162 830 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 NOM1Q5C9Z4 860 aaKnown RBP18.84■□□□□ 0.61
STRC-208ENST00000470279 MOB2Q70IA6 237 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 COPS6Q7L5N1 327 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 ZNF428Q96B54 188 aa18.84■□□□□ 0.61
STRC-208ENST00000470279 NEFMP07197 916 aa18.83■□□□□ 0.6
STRC-208ENST00000470279 ZNF280AP59817 542 aaPredicted RBP18.83■□□□□ 0.6
STRC-208ENST00000470279 AIMP1Q12904 312 aaKnown RBP18.83■□□□□ 0.6
STRC-208ENST00000470279 NFE2L2Q16236 605 aa18.83■□□□□ 0.6
STRC-208ENST00000470279 TBC1D16Q8TBP0 767 aa18.83■□□□□ 0.6
STRC-208ENST00000470279 XAGE3Q8WTP9 111 aa18.83■□□□□ 0.6
STRC-208ENST00000470279 SF3B3Q15393 1217 aaKnown RBP18.82■□□□□ 0.6
STRC-208ENST00000470279 TSPYL4Q9UJ04 414 aa18.82■□□□□ 0.6
STRC-208ENST00000470279 TM4SF4P48230 202 aa18.81■□□□□ 0.6
STRC-208ENST00000470279 PLEKHF1Q96S99 279 aa18.81■□□□□ 0.6
STRC-208ENST00000470279 PITPNM2Q9BZ72 1349 aa18.8■□□□□ 0.6
STRC-208ENST00000470279 UBE2Q2LH0YL09 131 aa18.8■□□□□ 0.6
STRC-208ENST00000470279 AGBL3Q8NEM8 1001 aa18.8■□□□□ 0.6
STRC-208ENST00000470279 CENPFP49454 3210 aa18.79■□□□□ 0.6
STRC-208ENST00000470279 FKTNO75072 461 aa18.79■□□□□ 0.6
STRC-208ENST00000470279 RSBN1LQ6PCB5 846 aaPredicted RBP18.79■□□□□ 0.6
STRC-208ENST00000470279 NECTIN2Q92692 538 aa18.79■□□□□ 0.6
STRC-208ENST00000470279 ZC3H12CQ9C0D7 883 aaKnown RBP18.79■□□□□ 0.6
STRC-208ENST00000470279 SCAF8Q9UPN6 1271 aaKnown RBP18.79■□□□□ 0.6
STRC-208ENST00000470279 KIAA0100Q14667 2235 aaKnown RBP18.79■□□□□ 0.6
STRC-208ENST00000470279 RBBP6Q7Z6E9 1792 aaKnown RBP18.78■□□□□ 0.6
STRC-208ENST00000470279 FAM89AQ96GI7 184 aa18.78■□□□□ 0.6
STRC-208ENST00000470279 CFHR5Q9BXR6 569 aa18.78■□□□□ 0.6
STRC-208ENST00000470279 R3HDMLQ9H3Y0 253 aa18.78■□□□□ 0.6
STRC-208ENST00000470279 MYOZ2Q9NPC6 264 aa18.78■□□□□ 0.6
STRC-208ENST00000470279 PODXL2Q9NZ53 605 aa18.78■□□□□ 0.6
STRC-208ENST00000470279 MKRN3Q13064 507 aaKnown RBP18.77■□□□□ 0.6
STRC-208ENST00000470279 GMLQ99445 158 aa18.77■□□□□ 0.6
STRC-208ENST00000470279 G3V3G9 751 aa18.76■□□□□ 0.59
STRC-208ENST00000470279 UFL1O94874 794 aa18.76■□□□□ 0.59
STRC-208ENST00000470279 FXR1P51114 621 aaKnown RBP eCLIP18.76■□□□□ 0.59
STRC-208ENST00000470279 RPS8P62241 208 aaKnown RBP18.76■□□□□ 0.59
STRC-208ENST00000470279 SREBF2Q12772 1141 aa18.76■□□□□ 0.59
STRC-208ENST00000470279 DCAF8Q5TAQ9 597 aa18.76■□□□□ 0.59
STRC-208ENST00000470279 PRAMEF18Q5VWM3 479 aa18.76■□□□□ 0.59
STRC-208ENST00000470279 BRCA2P51587 3418 aa18.75■□□□□ 0.59
STRC-208ENST00000470279 POTEFA5A3E0 1075 aa18.75■□□□□ 0.59
STRC-208ENST00000470279 USP17L8P0C7I0 530 aa18.75■□□□□ 0.59
STRC-208ENST00000470279 TTLL12Q14166 644 aaPredicted RBP18.75■□□□□ 0.59
STRC-208ENST00000470279 ISCA1Q9BUE6 129 aa18.75■□□□□ 0.59
STRC-208ENST00000470279 CEP290O15078 2479 aa18.74■□□□□ 0.59
STRC-208ENST00000470279 GGA1Q9UJY5 639 aa18.74■□□□□ 0.59
STRC-208ENST00000470279 MAPK8IP3Q9UPT6 1336 aa18.74■□□□□ 0.59
STRC-208ENST00000470279 ATP5J2-PTCD1G3V325 749 aa18.73■□□□□ 0.59
STRC-208ENST00000470279 RTL5Q5HYW3 569 aaPredicted RBP18.73■□□□□ 0.59
STRC-208ENST00000470279 PLBD2Q8NHP8 589 aa18.73■□□□□ 0.59
STRC-208ENST00000470279 BABAM1Q9NWV8 329 aa18.73■□□□□ 0.59
STRC-208ENST00000470279 ANKIB1Q9P2G1 1089 aa18.73■□□□□ 0.59
STRC-208ENST00000470279 ZNF646O15015 1829 aaPredicted RBP18.72■□□□□ 0.59
STRC-208ENST00000470279 IRS4O14654 1257 aaPredicted RBP18.72■□□□□ 0.59
STRC-208ENST00000470279 NBPF9Q3BBW0 867 aa18.72■□□□□ 0.59
STRC-208ENST00000470279 INTS3Q68E01 1043 aaKnown RBP18.72■□□□□ 0.59
STRC-208ENST00000470279 PTPN12Q05209 780 aaKnown RBP18.71■□□□□ 0.59
STRC-208ENST00000470279 CCER1Q8TC90 406 aaPredicted RBP18.71■□□□□ 0.59
STRC-208ENST00000470279 SEC31BQ9NQW1 1179 aa18.71■□□□□ 0.59
STRC-208ENST00000470279 CHPF2Q9P2E5 772 aa18.71■□□□□ 0.59
STRC-208ENST00000470279 TRIM17Q9Y577 477 aa18.71■□□□□ 0.59
STRC-208ENST00000470279 TRIOBPQ9H2D6 2365 aa18.71■□□□□ 0.59
STRC-208ENST00000470279 USP17L3A6NCW0 530 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 USP17L4A6NCW7 530 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 NF2P35240 595 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 ANKRD13DQ6ZTN6 518 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 OTOP1Q7RTM1 612 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 USP17L1Q7RTZ2 530 aa18.7■□□□□ 0.58
STRC-208ENST00000470279 LAMB1P07942 1786 aa18.69■□□□□ 0.58
STRC-208ENST00000470279 ALDH1A1P00352 501 aa18.69■□□□□ 0.58
STRC-208ENST00000470279 KRT24Q2M2I5 525 aa18.69■□□□□ 0.58
STRC-208ENST00000470279 SPRYD7Q5W111 196 aa18.69■□□□□ 0.58
STRC-208ENST00000470279 PNNQ9H307 717 aaKnown RBP18.68■□□□□ 0.58
STRC-208ENST00000470279 SZT2Q5T011 3432 aa18.68■□□□□ 0.58
STRC-208ENST00000470279 WNT10BO00744 389 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 RIPK4P57078 832 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 TRIM28Q13263 835 aaKnown RBP18.67■□□□□ 0.58
STRC-208ENST00000470279 PRKG1Q13976 671 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 ARMC9Q7Z3E5 817 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 PODNQ7Z5L7 613 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 XDHP47989 1333 aa18.67■□□□□ 0.58
STRC-208ENST00000470279 EN2P19622 333 aaPredicted RBP18.66■□□□□ 0.58
STRC-208ENST00000470279 LDLRAD1Q5T700 205 aa18.66■□□□□ 0.58
STRC-208ENST00000470279 MXD3Q9BW11 206 aa18.66■□□□□ 0.58
STRC-208ENST00000470279 HDGFL1Q5TGJ6 251 aa18.65■□□□□ 0.58
STRC-208ENST00000470279 IFNL1Q8IU54 200 aa18.65■□□□□ 0.58
STRC-208ENST00000470279 ARMC5Q96C12 935 aa18.65■□□□□ 0.58
STRC-208ENST00000470279 COLQQ9Y215 455 aaPredicted RBP18.65■□□□□ 0.58
STRC-208ENST00000470279 PTPN22Q9Y2R2 807 aa18.65■□□□□ 0.58
STRC-208ENST00000470279 MANSC4A6NHS7 340 aaPredicted RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms