RNA–Protein interactions for RNA: ENST00000470068.2

CCDC144A-212, Transcript of coiled-coil domain containing 144A, humanhuman

TSL 1 (best)

Gene CCDC144A, Length 5,142 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144A-212ENST00000470068 CEP112Q8N8E3 955 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 TNPO1Q92973 898 aaKnown RBP7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 TBX22Q9Y458 520 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 CEP83Q9Y592 693 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 SBNO1A3KN83 1393 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 RTL9Q8NET4 1388 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 PRKG1Q13976 671 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 PTPN14Q15678 1187 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 VWA3BQ502W6 1294 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 ZNF530Q6P9A1 599 aaPredicted RBP7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 BRAPQ7Z569 592 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 NLGN1Q8N2Q7 840 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 ZNF784Q8NCA9 323 aaPredicted RBP7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 CALR3Q96L12 384 aaKnown RBP7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 TSGA10Q9BZW7 698 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 HAUS2Q9NVX0 235 aa7.05□□□□□ -1.28
CCDC144A-212ENST00000470068 HECW2Q9P2P5 1572 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 FCHSD1Q86WN1 690 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NIM1KQ8IY84 436 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 ZNF713Q8N859 430 aaPredicted RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 LLPHQ9BRT6 129 aaKnown RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NUCKS1Q9H1E3 243 aaKnown RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 USP19O94966 1318 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 ARHGAP31Q2M1Z3 1444 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 RPGRIP1Q96KN7 1286 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NEUROD6Q96NK8 337 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NAP1L3Q99457 506 aaPredicted RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 RRAGCQ9HB90 399 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 RASAL2Q9UJF2 1139 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 RIMS2Q9UQ26 1411 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 BICDL2A1A5D9 508 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 STK25O00506 426 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 EIF2S2P20042 333 aaKnown RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 ATP5DP30049 168 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 CYLC1P35663 651 aaPredicted RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 ME1P48163 572 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 KRT83P78385 493 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NBPF11Q86T75 865 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 SPATS2Q86XZ4 545 aaKnown RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 CCDC102AQ96A19 550 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NBPF6Q5VWK0 638 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NBPF5PQ86XG9 351 aaPredicted RBP7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 CCDC50Q8IVM0 306 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 CALML4Q96GE6 196 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 NBPF4Q96M43 638 aa7.04□□□□□ -1.28
CCDC144A-212ENST00000470068 AATKQ6ZMQ8 1374 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 ERBB4Q15303 1308 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 ECHDC1Q9NTX5 307 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 NOB1Q9ULX3 412 aaKnown RBP7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 KDM5BQ9UGL1 1544 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 ANKRD62A6NC57 917 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 SLC4A2P04920 1241 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 PDE4BQ07343 736 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 AKAP4Q5JQC9 854 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 SELENOOQ9BVL4 669 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 TCP11L1Q9NUJ3 509 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 TSKSQ9UJT2 592 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 PCP11498 1178 aaKnown RBP7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 MAP7Q14244 749 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 PPP1R42Q7Z4L9 355 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 SLC16A10Q8TF71 515 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 ZNF592Q92610 1267 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 IL2RBP14784 551 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 CATIPQ7Z7H3 387 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 ZC3H15Q8WU90 426 aaKnown RBP7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 LZTS2Q9BRK4 669 aa7.03□□□□□ -1.28
CCDC144A-212ENST00000470068 PARD3Q8TEW0 1356 aa7.02□□□□□ -1.28
CCDC144A-212ENST00000470068 GBP1P32455 592 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 TPCN1Q9ULQ1 816 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 ARHGEF5Q12774 1597 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 RARSP54136 660 aaKnown RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 TXNRD1Q16881 649 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 AXDND1Q5T1B0 1012 aaPredicted RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 WAPLQ7Z5K2 1190 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 PDILTQ8N807 584 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 SETDB2Q96T68 719 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 RBM28Q9NW13 759 aaKnown RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 PPFIA3O75145 1194 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 SSRP1Q08945 709 aaKnown RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 KIAA1328Q86T90 577 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 FAM177A1Q8N128 213 aaPredicted RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 MAIP1Q8WWC4 291 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 CSRNP2Q9H175 543 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 BCCIPQ9P287 314 aaKnown RBP eCLIP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 WASLO00401 505 aaPredicted RBP7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 ATP2A1O14983 1001 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 MICALL1Q8N3F8 863 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 NYXQ9GZU5 481 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 PRM3Q9NNZ6 103 aa7.02□□□□□ -1.29
CCDC144A-212ENST00000470068 NEO1Q92859 1461 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 TOP1P11387 765 aaKnown RBP7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 ALDH3A1P30838 453 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 CASQ1P31415 396 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 EIF5P55010 431 aaKnown RBP7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 CCDC110Q8TBZ0 833 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 NUDT16Q96DE0 195 aaKnown RBP7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 SWAP70Q9UH65 585 aa7.01□□□□□ -1.29
CCDC144A-212ENST00000470068 PRPF40AO75400 957 aaKnown RBP7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms