RNA–Protein interactions for RNA: ENST00000469653.5

SEMA4D-215, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 3,533 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-215ENST00000469653 ATP10DQ9P241 1426 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 ZBTB7AO95365 584 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 GSPT1P15170 499 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 ZNF445P59923 1031 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 SLC16A10Q8TF71 515 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 GCC1Q96CN9 775 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 SETDB2Q96T68 719 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 ISCA1Q9BUE6 129 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 SRCIN1Q9C0H9 1055 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 PXDNLA1KZ92 1463 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 UBN2Q6ZU65 1347 aa12.04□□□□□ -0.48
SEMA4D-215ENST00000469653 NFIXQ14938 502 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 CAVIN1Q6NZI2 390 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 LINS1Q8NG48 757 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 TSC1Q92574 1164 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 NEURL1BA8MQ27 555 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 GOLGA6L22H0YM25 854 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 CCT4P50991 539 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 ZNF830Q96NB3 372 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 RBSNQ9H1K0 784 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 CYP2E1P05181 493 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 ZSCAN23Q3MJ62 389 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 NLRP10Q86W26 655 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 JARID2Q92833 1246 aaPredicted RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 LMBRD1Q9NUN5 540 aa12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 RBM27Q9P2N5 1060 aaKnown RBP12.03□□□□□ -0.48
SEMA4D-215ENST00000469653 TM4SF1P30408 202 aa12.02□□□□□ -0.48
SEMA4D-215ENST00000469653 INTS3Q68E01 1043 aaKnown RBP12.02□□□□□ -0.48
SEMA4D-215ENST00000469653 COL24A1Q17RW2 1714 aa12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 MSNP26038 577 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 TRIM28Q13263 835 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 CCDC191Q8NCU4 936 aa12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 LARP6Q9BRS8 491 aaKnown RBP12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 CWC25Q9NXE8 425 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 ATF5Q9Y2D1 282 aaPredicted RBP12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 MCCP23508 829 aa12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 SUSD4Q5VX71 490 aa12.02□□□□□ -0.49
SEMA4D-215ENST00000469653 CDC45O75419 566 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 ALDH1L1O75891 902 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 MMP10P09238 476 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 PARP10Q53GL7 1025 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 MTFR1LQ9H019 292 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 CARMIL3Q8ND23 1372 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 DDR1Q08345 913 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 GCKRQ14397 625 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 TSHZ3Q63HK5 1081 aa12.01□□□□□ -0.49
SEMA4D-215ENST00000469653 CC2D2BQ6DHV5 1058 aa12□□□□□ -0.49
SEMA4D-215ENST00000469653 PPP1R42Q7Z4L9 355 aa12□□□□□ -0.49
SEMA4D-215ENST00000469653 PDLIM2Q96JY6 352 aa12□□□□□ -0.49
SEMA4D-215ENST00000469653 POLRMTO00411 1230 aaKnown RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 PDZRN4Q6ZMN7 1036 aaPredicted RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 NBPF5PQ86XG9 351 aaPredicted RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 UTP14AQ9BVJ6 771 aaKnown RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 TRMT112Q9UI30 125 aaKnown RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 C9orf78Q9NZ63 289 aaPredicted RBP12□□□□□ -0.49
SEMA4D-215ENST00000469653 PARP3Q9Y6F1 533 aa12□□□□□ -0.49
SEMA4D-215ENST00000469653 SERPINB2P05120 415 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 PLEKHM2Q8IWE5 1019 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 GPT2Q8TD30 523 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 NOL7Q9UMY1 257 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 CHMP3Q9Y3E7 222 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 NUTM1Q86Y26 1132 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 FAM89AQ96GI7 184 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 NPHP1O15259 732 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 NTSR2O95665 410 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 RABEP1Q15276 862 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 C16orf71Q8IYS4 520 aaPredicted RBP11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 SYNE4Q8N205 404 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 ZGPATQ8N5A5 531 aaKnown RBP11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 NYXQ9GZU5 481 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 USP44Q9H0E7 712 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 GDPD2Q9HCC8 539 aa11.99□□□□□ -0.49
SEMA4D-215ENST00000469653 GRM8O00222 908 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 TERF1P54274 439 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 TPTE2Q6XPS3 522 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 UBE3BQ7Z3V4 1068 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 ZBTB38Q8NAP3 1195 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 ZDHHC9Q9Y397 364 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 SMARCA5O60264 1052 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 ZNF500O60304 480 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 BRD1O95696 1058 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 HS1BP3Q53T59 392 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 CCDC24Q8N4L8 307 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 RGS22Q8NE09 1264 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 USP26Q9BXU7 913 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 NRXN2Q9P2S2 1712 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 PRPF40AO75400 957 aaKnown RBP11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 NBPF7P0C2Y1 421 aaPredicted RBP11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 NUCB2P80303 420 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 CNBD1Q8NA66 436 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 MEIS3Q99687 375 aa11.98□□□□□ -0.49
SEMA4D-215ENST00000469653 H7C1W4 665 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 PCCAP05165 728 aaPredicted RBP11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 POLD1P28340 1107 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 ERFEQ4G0M1 354 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 NSFL1CQ9UNZ2 370 aaKnown RBP11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 SH3TC1Q8TE82 1336 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 CLGNO14967 610 aa11.97□□□□□ -0.49
SEMA4D-215ENST00000469653 OTUD7AQ8TE49 926 aaPredicted RBP11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms