RNA–Protein interactions for RNA: ENST00000469108.1

CDK5-202, Transcript of cyclin dependent kinase 5, humanhuman

TSL 3

Gene CDK5, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5-202ENST00000469108 PSME4Q14997 1843 aa28.28■■■□□ 2.12
CDK5-202ENST00000469108 CXCL9Q07325 125 aa28.28■■■□□ 2.12
CDK5-202ENST00000469108 RIMBP2O15034 1052 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 UFL1O94874 794 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 POTEIP0CG38 1075 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 POTEJP0CG39 1038 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 GPR101Q96P66 508 aaPredicted RBP28.27■■■□□ 2.12
CDK5-202ENST00000469108 GGA1Q9UJY5 639 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 SCN9AQ15858 1988 aa28.27■■■□□ 2.12
CDK5-202ENST00000469108 YDJCA8MPS7 323 aa28.26■■■□□ 2.11
CDK5-202ENST00000469108 EPHX2P34913 555 aa28.26■■■□□ 2.11
CDK5-202ENST00000469108 IGHMBP2P38935 993 aaKnown RBP28.26■■■□□ 2.11
CDK5-202ENST00000469108 SCNN1DP51172 638 aa28.26■■■□□ 2.11
CDK5-202ENST00000469108 MINPP1Q9UNW1 487 aa28.26■■■□□ 2.11
CDK5-202ENST00000469108 UTYO14607 1347 aa28.25■■■□□ 2.11
CDK5-202ENST00000469108 LMOD1P29536 600 aaPredicted RBP28.24■■■□□ 2.11
CDK5-202ENST00000469108 APLP1P51693 650 aa28.24■■■□□ 2.11
CDK5-202ENST00000469108 BRPF1P55201 1214 aaPredicted RBP28.24■■■□□ 2.11
CDK5-202ENST00000469108 EPHA10Q5JZY3 1008 aa28.24■■■□□ 2.11
CDK5-202ENST00000469108 CIAPIN1Q6FI81 312 aa28.24■■■□□ 2.11
CDK5-202ENST00000469108 CHADLQ6NUI6 762 aa28.24■■■□□ 2.11
CDK5-202ENST00000469108 DBNDD1Q9H9R9 158 aa28.24■■■□□ 2.11
CDK5-202ENST00000469108 ANKRD18BA2A2Z9 1011 aa28.23■■■□□ 2.11
CDK5-202ENST00000469108 RAD17O75943 681 aa28.23■■■□□ 2.11
CDK5-202ENST00000469108 NBPF7P0C2Y1 421 aaPredicted RBP28.23■■■□□ 2.11
CDK5-202ENST00000469108 LDHDQ86WU2 507 aa28.23■■■□□ 2.11
CDK5-202ENST00000469108 ZC3H12CQ9C0D7 883 aaKnown RBP28.23■■■□□ 2.11
CDK5-202ENST00000469108 ATP2B4P23634 1241 aa28.22■■■□□ 2.11
CDK5-202ENST00000469108 RARSP54136 660 aaKnown RBP28.22■■■□□ 2.11
CDK5-202ENST00000469108 IFIT5Q13325 482 aaKnown RBP28.22■■■□□ 2.11
CDK5-202ENST00000469108 TNIP1Q15025 636 aa28.22■■■□□ 2.11
CDK5-202ENST00000469108 LMBR1LQ6UX01 489 aa28.22■■■□□ 2.11
CDK5-202ENST00000469108 PNMA8AQ86V59 439 aaPredicted RBP28.22■■■□□ 2.11
CDK5-202ENST00000469108 MPHOSPH8Q99549 860 aa28.22■■■□□ 2.11
CDK5-202ENST00000469108 ECE2O60344 883 aa28.21■■■□□ 2.11
CDK5-202ENST00000469108 DOK7Q18PE1 504 aa28.21■■■□□ 2.11
CDK5-202ENST00000469108 EAPPQ56P03 285 aaPredicted RBP28.21■■■□□ 2.11
CDK5-202ENST00000469108 SUCLG2Q96I99 432 aa28.21■■■□□ 2.11
CDK5-202ENST00000469108 NOB1Q9ULX3 412 aaKnown RBP28.21■■■□□ 2.11
CDK5-202ENST00000469108 CHMP3Q9Y3E7 222 aa28.21■■■□□ 2.11
CDK5-202ENST00000469108 EPS15P42566 896 aa28.2■■■□□ 2.1
CDK5-202ENST00000469108 GMPSP49915 693 aaPredicted RBP28.2■■■□□ 2.1
CDK5-202ENST00000469108 KAZALD1Q96I82 304 aa28.2■■■□□ 2.1
CDK5-202ENST00000469108 GPRC5DQ9NZD1 345 aa28.2■■■□□ 2.1
CDK5-202ENST00000469108 MED23Q9ULK4 1368 aa28.19■■■□□ 2.1
CDK5-202ENST00000469108 ZNF646O15015 1829 aaPredicted RBP28.18■■■□□ 2.1
CDK5-202ENST00000469108 WTIPA6NIX2 430 aaPredicted RBP28.18■■■□□ 2.1
CDK5-202ENST00000469108 CCT4P50991 539 aaKnown RBP28.18■■■□□ 2.1
CDK5-202ENST00000469108 CCDC57Q2TAC2 916 aa28.17■■■□□ 2.1
CDK5-202ENST00000469108 ANKRD2Q9GZV1 360 aa28.17■■■□□ 2.1
CDK5-202ENST00000469108 ZBED9Q6R2W3 1325 aa28.17■■■□□ 2.1
CDK5-202ENST00000469108 KIF16BQ96L93 1317 aa28.17■■■□□ 2.1
CDK5-202ENST00000469108 PSMD14O00487 310 aa28.16■■■□□ 2.1
CDK5-202ENST00000469108 API5Q9BZZ5 524 aaKnown RBP28.16■■■□□ 2.1
CDK5-202ENST00000469108 USP44Q9H0E7 712 aa28.16■■■□□ 2.1
CDK5-202ENST00000469108 KCNQ5Q9NR82 932 aa28.16■■■□□ 2.1
CDK5-202ENST00000469108 G3V3G9 751 aa28.15■■■□□ 2.1
CDK5-202ENST00000469108 CHRNDQ07001 517 aa28.15■■■□□ 2.1
CDK5-202ENST00000469108 DCAF8Q5TAQ9 597 aa28.15■■■□□ 2.1
CDK5-202ENST00000469108 USP50Q70EL3 339 aaPredicted RBP28.15■■■□□ 2.1
CDK5-202ENST00000469108 BICC1Q9H694 974 aaKnown RBP28.15■■■□□ 2.1
CDK5-202ENST00000469108 CLEC11AQ9Y240 323 aa28.15■■■□□ 2.1
CDK5-202ENST00000469108 LEMD3Q9Y2U8 911 aa28.15■■■□□ 2.1
CDK5-202ENST00000469108 RABL6Q3YEC7 729 aaPredicted RBP28.14■■■□□ 2.1
CDK5-202ENST00000469108 ADARB2Q9NS39 739 aaKnown RBP28.14■■■□□ 2.1
CDK5-202ENST00000469108 ARHGAP45Q92619 1136 aa28.13■■■□□ 2.09
CDK5-202ENST00000469108 ZNF594Q96JF6 807 aaPredicted RBP28.13■■■□□ 2.09
CDK5-202ENST00000469108 ZNF804BA4D1E1 1349 aa28.13■■■□□ 2.09
CDK5-202ENST00000469108 TAF7LQ5H9L4 462 aa28.12■■■□□ 2.09
CDK5-202ENST00000469108 ANKRD44Q8N8A2 993 aa28.12■■■□□ 2.09
CDK5-202ENST00000469108 ZBTB12Q9Y330 459 aaPredicted RBP28.12■■■□□ 2.09
CDK5-202ENST00000469108 HTRA3P83110 453 aa28.11■■■□□ 2.09
CDK5-202ENST00000469108 DPF2Q92785 391 aa28.11■■■□□ 2.09
CDK5-202ENST00000469108 PASKQ96RG2 1323 aa28.11■■■□□ 2.09
CDK5-202ENST00000469108 ZNF609O15014 1411 aa28.1■■■□□ 2.09
CDK5-202ENST00000469108 RPS12P25398 132 aaKnown RBP28.1■■■□□ 2.09
CDK5-202ENST00000469108 MAP1SQ66K74 1059 aaPredicted RBP28.1■■■□□ 2.09
CDK5-202ENST00000469108 LDHAL6AQ6ZMR3 332 aa28.1■■■□□ 2.09
CDK5-202ENST00000469108 PODNQ7Z5L7 613 aa28.1■■■□□ 2.09
CDK5-202ENST00000469108 CNOT7Q9UIV1 285 aaKnown RBP28.1■■■□□ 2.09
CDK5-202ENST00000469108 ITGBL1O95965 494 aaPredicted RBP28.09■■■□□ 2.09
CDK5-202ENST00000469108 VIL1P09327 827 aaKnown RBP28.09■■■□□ 2.09
CDK5-202ENST00000469108 TXNRD3Q86VQ6 643 aa28.09■■■□□ 2.09
CDK5-202ENST00000469108 MICALL2Q8IY33 904 aa28.09■■■□□ 2.09
CDK5-202ENST00000469108 SHTN1A0MZ66 631 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 TAF5LO75529 589 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 BCAR3O75815 825 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 KLRK1P26718 216 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 KCNJ4P48050 445 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 DNAJC5GQ8N7S2 189 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 HELBQ8NG08 1087 aaPredicted RBP28.08■■■□□ 2.09
CDK5-202ENST00000469108 CNNM1Q9NRU3 951 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 TRPM7Q96QT4 1865 aa28.08■■■□□ 2.09
CDK5-202ENST00000469108 CNTROBQ8N137 903 aa28.07■■■□□ 2.08
CDK5-202ENST00000469108 COA1Q9GZY4 146 aa28.07■■■□□ 2.08
CDK5-202ENST00000469108 H7C1D1 291 aa28.06■■■□□ 2.08
CDK5-202ENST00000469108 IRS2Q9Y4H2 1338 aa28.06■■■□□ 2.08
CDK5-202ENST00000469108 IPO8O15397 1037 aaKnown RBP28.05■■■□□ 2.08
CDK5-202ENST00000469108 USP17L3A6NCW0 530 aa28.04■■■□□ 2.08
CDK5-202ENST00000469108 USP17L4A6NCW7 530 aa28.04■■■□□ 2.08
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms