RNA–Protein interactions for RNA: ENST00000468958.1

ABCF1-204, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 3

Gene ABCF1, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-204ENST00000468958 IQCA1LA6NCM1 817 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 CT47B1P0C2W7 299 aaPredicted RBP15.97■□□□□ 0.15
ABCF1-204ENST00000468958 EPS15P42566 896 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 CHADLQ6NUI6 762 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 DBNDD1Q9H9R9 158 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 KCNQ5Q9NR82 932 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 PODXL2Q9NZ53 605 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 TRPM7Q96QT4 1865 aa15.97■□□□□ 0.15
ABCF1-204ENST00000468958 SHTN1A0MZ66 631 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 RAD17O75943 681 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 CSF1RP07333 972 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 FOXO4P98177 505 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 FAM161AQ3B820 660 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 EAPPQ56P03 285 aaPredicted RBP15.96■□□□□ 0.15
ABCF1-204ENST00000468958 EPHA10Q5JZY3 1008 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 SSH1Q8WYL5 1049 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 BCL2L13Q9BXK5 485 aa15.96■□□□□ 0.15
ABCF1-204ENST00000468958 POLR2AP24928 1970 aaKnown RBP15.96■□□□□ 0.15
ABCF1-204ENST00000468958 C6orf229H3BNL8 230 aa15.95■□□□□ 0.14
ABCF1-204ENST00000468958 HSP90B1P14625 803 aaKnown RBP15.95■□□□□ 0.14
ABCF1-204ENST00000468958 DOK7Q18PE1 504 aa15.95■□□□□ 0.14
ABCF1-204ENST00000468958 WASHC4Q2M389 1173 aa15.95■□□□□ 0.14
ABCF1-204ENST00000468958 LDHDQ86WU2 507 aa15.95■□□□□ 0.14
ABCF1-204ENST00000468958 ANKRD18AQ8IVF6 992 aa15.95■□□□□ 0.14
ABCF1-204ENST00000468958 PASKQ96RG2 1323 aa15.94■□□□□ 0.14
ABCF1-204ENST00000468958 ITGBL1O95965 494 aaPredicted RBP15.94■□□□□ 0.14
ABCF1-204ENST00000468958 GMPSP49915 693 aaPredicted RBP15.94■□□□□ 0.14
ABCF1-204ENST00000468958 CIAPIN1Q6FI81 312 aa15.94■□□□□ 0.14
ABCF1-204ENST00000468958 MINPP1Q9UNW1 487 aa15.94■□□□□ 0.14
ABCF1-204ENST00000468958 ECE2O60344 883 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 UFL1O94874 794 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 ITGA6P23229 1130 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 SLC4A10Q6U841 1118 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 KAZALD1Q96I82 304 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 GPRC5DQ9NZD1 345 aa15.93■□□□□ 0.14
ABCF1-204ENST00000468958 ZBTB12Q9Y330 459 aaPredicted RBP15.93■□□□□ 0.14
ABCF1-204ENST00000468958 PSMD14O00487 310 aa15.92■□□□□ 0.14
ABCF1-204ENST00000468958 FMR1Q06787 632 aaKnown RBP eCLIP15.92■□□□□ 0.144e-6■■■■□ 21.6
ABCF1-204ENST00000468958 MAP1SQ66K74 1059 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-204ENST00000468958 CDC5LQ99459 802 aaKnown RBP15.92■□□□□ 0.14
ABCF1-204ENST00000468958 BSDC1Q9NW68 430 aaPredicted RBP15.92■□□□□ 0.14
ABCF1-204ENST00000468958 ANKIB1Q9P2G1 1089 aa15.92■□□□□ 0.14
ABCF1-204ENST00000468958 GGA1Q9UJY5 639 aa15.92■□□□□ 0.14
ABCF1-204ENST00000468958 XDHP47989 1333 aa15.92■□□□□ 0.14
ABCF1-204ENST00000468958 GRM8O00222 908 aa15.91■□□□□ 0.14
ABCF1-204ENST00000468958 NBPF7P0C2Y1 421 aaPredicted RBP15.91■□□□□ 0.14
ABCF1-204ENST00000468958 CLEC11AQ9Y240 323 aa15.91■□□□□ 0.14
ABCF1-204ENST00000468958 ALDH1L1O75891 902 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 KLRK1P26718 216 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 LMOD1P29536 600 aaPredicted RBP15.9■□□□□ 0.14
ABCF1-204ENST00000468958 HIRAP54198 1017 aaPredicted RBP15.9■□□□□ 0.14
ABCF1-204ENST00000468958 PNMA8AQ86V59 439 aaPredicted RBP15.9■□□□□ 0.14
ABCF1-204ENST00000468958 TXNRD3Q86VQ6 643 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 TRPM4Q8TD43 1214 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 KLRG1Q96E93 195 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 SUCLG2Q96I99 432 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 EYA3Q99504 573 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 SRCIN1Q9C0H9 1055 aa15.9■□□□□ 0.14
ABCF1-204ENST00000468958 SNAP23O00161 211 aa15.89■□□□□ 0.13
ABCF1-204ENST00000468958 EGFRP00533 1210 aa15.89■□□□□ 0.13
ABCF1-204ENST00000468958 HOXD11P31277 338 aaPredicted RBP15.89■□□□□ 0.13
ABCF1-204ENST00000468958 ALDH1L2Q3SY69 923 aa15.89■□□□□ 0.13
ABCF1-204ENST00000468958 LMBR1LQ6UX01 489 aa15.89■□□□□ 0.13
ABCF1-204ENST00000468958 ZNF594Q96JF6 807 aaPredicted RBP15.89■□□□□ 0.13
ABCF1-204ENST00000468958 ZC3H12CQ9C0D7 883 aaKnown RBP15.89■□□□□ 0.13
ABCF1-204ENST00000468958 UTYO14607 1347 aa15.89■□□□□ 0.13
ABCF1-204ENST00000468958 ATP2B4P23634 1241 aa15.88■□□□□ 0.13
ABCF1-204ENST00000468958 CCT4P50991 539 aaKnown RBP15.88■□□□□ 0.13
ABCF1-204ENST00000468958 TNIP1Q15025 636 aa15.88■□□□□ 0.13
ABCF1-204ENST00000468958 USP50Q70EL3 339 aaPredicted RBP15.88■□□□□ 0.13
ABCF1-204ENST00000468958 CNTROBQ8N137 903 aa15.88■□□□□ 0.13
ABCF1-204ENST00000468958 ADARB2Q9NS39 739 aaKnown RBP15.88■□□□□ 0.13
ABCF1-204ENST00000468958 CNOT7Q9UIV1 285 aaKnown RBP15.88■□□□□ 0.13
ABCF1-204ENST00000468958 PTPRCP08575 1304 aa15.88■□□□□ 0.13
ABCF1-204ENST00000468958 IRS2Q9Y4H2 1338 aa15.88■□□□□ 0.13
ABCF1-204ENST00000468958 MED23Q9ULK4 1368 aa15.87■□□□□ 0.13
ABCF1-204ENST00000468958 IGHMBP2P38935 993 aaKnown RBP15.87■□□□□ 0.13
ABCF1-204ENST00000468958 CHRNDQ07001 517 aa15.87■□□□□ 0.13
ABCF1-204ENST00000468958 SMC4Q9NTJ3 1288 aa15.87■□□□□ 0.13
ABCF1-204ENST00000468958 C9orf78Q9NZ63 289 aaPredicted RBP15.87■□□□□ 0.13
ABCF1-204ENST00000468958 PCNTO95613 3336 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 ANKRD18BA2A2Z9 1011 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 TRAF5O00463 557 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 SAMD7Q7Z3H4 446 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 MICALL2Q8IY33 904 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 CHMP3Q9Y3E7 222 aa15.86■□□□□ 0.13
ABCF1-204ENST00000468958 ZNF609O15014 1411 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 TAF5LO75529 589 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 VIL1P09327 827 aaKnown RBP15.85■□□□□ 0.13
ABCF1-204ENST00000468958 DLK2Q6UY11 383 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 ANKRD44Q8N8A2 993 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 JMYQ8N9B5 988 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 HELBQ8NG08 1087 aaPredicted RBP15.85■□□□□ 0.13
ABCF1-204ENST00000468958 MPHOSPH8Q99549 860 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 MXD3Q9BW11 206 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 USP44Q9H0E7 712 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 CREBZFQ9NS37 354 aa15.85■□□□□ 0.13
ABCF1-204ENST00000468958 RARSP54136 660 aaKnown RBP15.84■□□□□ 0.13
ABCF1-204ENST00000468958 IFIT5Q13325 482 aaKnown RBP15.84■□□□□ 0.13
ABCF1-204ENST00000468958 DPF2Q92785 391 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms