RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 SOGA3Q5TF21 947 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 ERC1Q8IUD2 1116 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 PPP4R2Q9NY27 417 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 TAF1P21675 1872 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 A0A1B0GUL6 1792 aa13.99□□□□□ -0.17
MSH5-214ENST00000468602 A0A0G2JLW4 131 aa13.98□□□□□ -0.17
MSH5-214ENST00000468602 PRPF40BQ6NWY9 871 aaKnown RBP13.98□□□□□ -0.17
MSH5-214ENST00000468602 LDHAL6AQ6ZMR3 332 aa13.98□□□□□ -0.17
MSH5-214ENST00000468602 C15orf52Q6ZUT6 534 aaKnown RBP13.98□□□□□ -0.17
MSH5-214ENST00000468602 RTFDC1Q9BY42 306 aaPredicted RBP13.98□□□□□ -0.17
MSH5-214ENST00000468602 ANKRD2Q9GZV1 360 aa13.98□□□□□ -0.17
MSH5-214ENST00000468602 VPS33BQ9H267 617 aa13.98□□□□□ -0.17
MSH5-214ENST00000468602 MINPP1Q9UNW1 487 aa13.98□□□□□ -0.17
MSH5-214ENST00000468602 LTBP3Q9NS15 1303 aa13.97□□□□□ -0.17
MSH5-214ENST00000468602 MPHOSPH8Q99549 860 aa13.97□□□□□ -0.17
MSH5-214ENST00000468602 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
MSH5-214ENST00000468602 SURF6O75683 361 aaKnown RBP13.96□□□□□ -0.17
MSH5-214ENST00000468602 SASH1O94885 1247 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 PDE8BO95263 885 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 IGHDP01880 384 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 FGFR2P21802 821 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 G3BP1Q13283 466 aaKnown RBP eCLIP13.96□□□□□ -0.17
MSH5-214ENST00000468602 DALRD3Q5D0E6 543 aaKnown RBP13.96□□□□□ -0.17
MSH5-214ENST00000468602 ZNF622Q969S3 477 aaKnown RBP eCLIP13.96□□□□□ -0.172e-13■□□□□ 11.1
MSH5-214ENST00000468602 KIF1BPQ96EK5 621 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 ZNF594Q96JF6 807 aaPredicted RBP13.96□□□□□ -0.17
MSH5-214ENST00000468602 PSMD1Q99460 953 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 PPP1R1BQ9UD71 204 aaPredicted RBP13.96□□□□□ -0.17
MSH5-214ENST00000468602 LEMD3Q9Y2U8 911 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
MSH5-214ENST00000468602 FER1L6Q2WGJ9 1857 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 XDHP47989 1333 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 IRS2Q9Y4H2 1338 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 UBE4AQ14139 1066 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 LRRC24Q50LG9 513 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 TAF7LQ5H9L4 462 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 NLGN2Q8NFZ4 835 aa13.95□□□□□ -0.18
MSH5-214ENST00000468602 CCDC85AQ96PX6 553 aaPredicted RBP13.95□□□□□ -0.18
MSH5-214ENST00000468602 PUS3Q9BZE2 481 aaKnown RBP13.95□□□□□ -0.18
MSH5-214ENST00000468602 PA2G4Q9UQ80 394 aaKnown RBP13.95□□□□□ -0.18
MSH5-214ENST00000468602 CHRNDQ07001 517 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 CENPQQ7L2Z9 268 aaPredicted RBP13.94□□□□□ -0.18
MSH5-214ENST00000468602 RTKN2Q8IZC4 609 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 KLHDC4Q8TBB5 520 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 RHPN1Q8TCX5 695 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 DUOX1Q9NRD9 1551 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 CNNM1Q9NRU3 951 aa13.94□□□□□ -0.18
MSH5-214ENST00000468602 SPEF2Q9C093 1822 aa13.93□□□□□ -0.18
MSH5-214ENST00000468602 CCDC93Q567U6 631 aa13.93□□□□□ -0.18
MSH5-214ENST00000468602 CEP126Q9P2H0 1117 aa13.93□□□□□ -0.18
MSH5-214ENST00000468602 AKAP2Q9Y2D5 859 aa13.93□□□□□ -0.18
MSH5-214ENST00000468602 ARAP2Q8WZ64 1704 aa13.93□□□□□ -0.18
MSH5-214ENST00000468602 ATP2B4P23634 1241 aa13.92□□□□□ -0.18
MSH5-214ENST00000468602 LRRCC1Q9C099 1032 aa13.92□□□□□ -0.18
MSH5-214ENST00000468602 EXOC6BQ9Y2D4 811 aa13.92□□□□□ -0.18
MSH5-214ENST00000468602 CACNA1SQ13698 1873 aa13.92□□□□□ -0.18
MSH5-214ENST00000468602 NUCB1Q02818 461 aa13.91□□□□□ -0.18
MSH5-214ENST00000468602 PUM3Q15397 648 aaKnown RBP13.91□□□□□ -0.18
MSH5-214ENST00000468602 MPNDQ8N594 471 aa13.91□□□□□ -0.18
MSH5-214ENST00000468602 SUPT20HQ8NEM7 779 aa13.91□□□□□ -0.18
MSH5-214ENST00000468602 LPIN2Q92539 896 aa13.91□□□□□ -0.18
MSH5-214ENST00000468602 ZNF512BQ96KM6 892 aaPredicted RBP13.91□□□□□ -0.18
MSH5-214ENST00000468602 TMX4Q9H1E5 349 aaPredicted RBP13.91□□□□□ -0.18
MSH5-214ENST00000468602 MED23Q9ULK4 1368 aa13.91□□□□□ -0.18
MSH5-214ENST00000468602 ZNF609O15014 1411 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 GPSM2P81274 684 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 TFCP2Q12800 502 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 TNNI3KQ59H18 835 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 METTL24Q5JXM2 366 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 TBC1D16Q8TBP0 767 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 CCDC136Q96JN2 1154 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 SIL1Q9H173 461 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 FPGT-TNNI3KV9GXZ4 949 aa13.9□□□□□ -0.18
MSH5-214ENST00000468602 ZNF804BA4D1E1 1349 aa13.9□□□□□ -0.19
MSH5-214ENST00000468602 SALL3Q9BXA9 1300 aa13.9□□□□□ -0.19
MSH5-214ENST00000468602 C21orf2O43822 256 aa13.89□□□□□ -0.19
MSH5-214ENST00000468602 FKBP4Q02790 459 aaKnown RBP eCLIP13.89□□□□□ -0.19
MSH5-214ENST00000468602 CLASRPQ8N2M8 674 aaKnown RBP13.89□□□□□ -0.19
MSH5-214ENST00000468602 POLLQ9UGP5 575 aa13.89□□□□□ -0.19
MSH5-214ENST00000468602 GGA1Q9UJY5 639 aa13.89□□□□□ -0.19
MSH5-214ENST00000468602 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.89□□□□□ -0.19
MSH5-214ENST00000468602 IGSF3O75054 1194 aa13.88□□□□□ -0.19
MSH5-214ENST00000468602 ATP2B3Q16720 1220 aa13.88□□□□□ -0.19
MSH5-214ENST00000468602 DPP8Q6V1X1 898 aaPredicted RBP13.88□□□□□ -0.19
MSH5-214ENST00000468602 FBXO33Q7Z6M2 555 aa13.88□□□□□ -0.19
MSH5-214ENST00000468602 EAF2Q96CJ1 260 aaPredicted RBP13.88□□□□□ -0.19
MSH5-214ENST00000468602 EYA3Q99504 573 aa13.88□□□□□ -0.19
MSH5-214ENST00000468602 OSBPL3Q9H4L5 887 aa13.88□□□□□ -0.19
MSH5-214ENST00000468602 NSFL1CQ9UNZ2 370 aaKnown RBP13.88□□□□□ -0.19
MSH5-214ENST00000468602 PDS5AQ29RF7 1337 aaKnown RBP13.88□□□□□ -0.19
MSH5-214ENST00000468602 NFKBIEO00221 500 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 GRIN3BO60391 1043 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 IFIT1P09914 478 aaKnown RBP13.87□□□□□ -0.19
MSH5-214ENST00000468602 KIAA2012Q0VF49 1180 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 OS9Q13438 667 aaPredicted RBP13.87□□□□□ -0.19
MSH5-214ENST00000468602 CHD1LQ86WJ1 897 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.87□□□□□ -0.19
MSH5-214ENST00000468602 ANKIB1Q9P2G1 1089 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 STAP2Q9UGK3 403 aa13.87□□□□□ -0.19
MSH5-214ENST00000468602 BCS1LQ9Y276 419 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms